RNA–Protein interactions for RNA: ENST00000489678.1

ABCD4-214, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 3,008 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-214ENST00000489678 STX17P56962 302 aa11.54□□□□□ -0.56
ABCD4-214ENST00000489678 PABPC4Q13310 644 aaKnown RBP eCLIP11.54□□□□□ -0.56
ABCD4-214ENST00000489678 DOCK1Q14185 1865 aa11.54□□□□□ -0.56
ABCD4-214ENST00000489678 PGM5Q15124 567 aa11.54□□□□□ -0.56
ABCD4-214ENST00000489678 DTHD1Q6ZMT9 781 aa11.54□□□□□ -0.56
ABCD4-214ENST00000489678 PROCA1Q8NCQ7 364 aaPredicted RBP11.54□□□□□ -0.56
ABCD4-214ENST00000489678 PDCD2LQ9BRP1 358 aa11.54□□□□□ -0.56
ABCD4-214ENST00000489678 ZNF577Q9BSK1 485 aa11.54□□□□□ -0.56
ABCD4-214ENST00000489678 PCDHA12Q9UN75 941 aa11.54□□□□□ -0.56
ABCD4-214ENST00000489678 GINS2Q9Y248 185 aa11.54□□□□□ -0.56
ABCD4-214ENST00000489678 CSDE1O75534 798 aaKnown RBP11.53□□□□□ -0.56
ABCD4-214ENST00000489678 IGBP1P78318 339 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 ATP2C1P98194 919 aaPredicted RBP11.53□□□□□ -0.56
ABCD4-214ENST00000489678 MTMR1Q13613 665 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 CEP135Q66GS9 1140 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 KRT25Q7Z3Z0 450 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 SH3RF1Q7Z6J0 888 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 CCDC150Q8NCX0 1101 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 NOC3LQ8WTT2 800 aaKnown RBP11.53□□□□□ -0.56
ABCD4-214ENST00000489678 PXMP2Q9NR77 195 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 KCND1Q9NSA2 647 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 RNF216Q9NWF9 866 aaPredicted RBP11.53□□□□□ -0.56
ABCD4-214ENST00000489678 WRAP73Q9P2S5 460 aaPredicted RBP11.53□□□□□ -0.56
ABCD4-214ENST00000489678 HOOK1Q9UJC3 728 aaKnown RBP11.53□□□□□ -0.56
ABCD4-214ENST00000489678 COL6A3P12111 3177 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 COL2A1P02458 1487 aaPredicted RBP11.53□□□□□ -0.56
ABCD4-214ENST00000489678 PHIPQ8WWQ0 1821 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 ADCY6O43306 1168 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 FCER1AP12319 257 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 ZNF18P17022 549 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 SFPQP23246 707 aaKnown RBP eCLIP11.53□□□□□ -0.56
ABCD4-214ENST00000489678 PRKCZQ05513 592 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 ITGB3BPQ13352 177 aaPredicted RBP11.53□□□□□ -0.56
ABCD4-214ENST00000489678 SH3D19Q5HYK7 790 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 PLA2G4FQ68DD2 849 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 VSTM4Q8IW00 320 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 SNX29Q8TEQ0 813 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 SH3TC2Q8TF17 1288 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 PAGE5Q96GU1 130 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 NFE2L3Q9Y4A8 694 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 ZSWIM8A7E2V4 1837 aa11.53□□□□□ -0.56
ABCD4-214ENST00000489678 SLFN14P0C7P3 912 aa11.52□□□□□ -0.56
ABCD4-214ENST00000489678 IDEP14735 1019 aa11.52□□□□□ -0.56
ABCD4-214ENST00000489678 CD44P16070 742 aaKnown RBP11.52□□□□□ -0.56
ABCD4-214ENST00000489678 UBA7P41226 1012 aa11.52□□□□□ -0.56
ABCD4-214ENST00000489678 LRCH2Q5VUJ6 765 aa11.52□□□□□ -0.56
ABCD4-214ENST00000489678 KSR1Q8IVT5 923 aa11.52□□□□□ -0.56
ABCD4-214ENST00000489678 GLIS3Q8NEA6 775 aa11.52□□□□□ -0.56
ABCD4-214ENST00000489678 TRAPPC12Q8WVT3 735 aa11.52□□□□□ -0.56
ABCD4-214ENST00000489678 ZNF592Q92610 1267 aa11.52□□□□□ -0.56
ABCD4-214ENST00000489678 SECISBP2LQ93073 1101 aaKnown RBP11.52□□□□□ -0.56
ABCD4-214ENST00000489678 TRIM47Q96LD4 638 aa11.52□□□□□ -0.56
ABCD4-214ENST00000489678 LRWD1Q9UFC0 647 aa11.52□□□□□ -0.56
ABCD4-214ENST00000489678 TCEAL9Q9UHQ7 104 aa11.52□□□□□ -0.56
ABCD4-214ENST00000489678 KIAA1024Q9UPX6 916 aa11.52□□□□□ -0.56
ABCD4-214ENST00000489678 GREB1LQ9C091 1923 aaPredicted RBP11.52□□□□□ -0.57
ABCD4-214ENST00000489678 IPO5O00410 1097 aaKnown RBP11.52□□□□□ -0.57
ABCD4-214ENST00000489678 OR52Z1P0C646 297 aa11.52□□□□□ -0.57
ABCD4-214ENST00000489678 CLK2P49760 499 aaKnown RBP11.52□□□□□ -0.57
ABCD4-214ENST00000489678 BEX3Q00994 111 aa11.52□□□□□ -0.57
ABCD4-214ENST00000489678 MLKLQ8NB16 471 aa11.52□□□□□ -0.57
ABCD4-214ENST00000489678 FERMT2Q96AC1 680 aa11.52□□□□□ -0.57
ABCD4-214ENST00000489678 LENG9Q96B70 501 aa11.52□□□□□ -0.57
ABCD4-214ENST00000489678 SAMSN1Q9NSI8 373 aaKnown RBP11.52□□□□□ -0.57
ABCD4-214ENST00000489678 MYH7BA7E2Y1 1941 aa11.52□□□□□ -0.57
ABCD4-214ENST00000489678 CASP8AP2Q9UKL3 1982 aa11.52□□□□□ -0.57
ABCD4-214ENST00000489678 BACH1O14867 736 aa11.52□□□□□ -0.57
ABCD4-214ENST00000489678 GAS7O60861 476 aa11.52□□□□□ -0.57
ABCD4-214ENST00000489678 NPEPPSP55786 919 aa11.52□□□□□ -0.57
ABCD4-214ENST00000489678 PDE4DQ08499 809 aa11.52□□□□□ -0.57
ABCD4-214ENST00000489678 NAA30Q147X3 362 aaPredicted RBP11.52□□□□□ -0.57
ABCD4-214ENST00000489678 PTPN14Q15678 1187 aa11.52□□□□□ -0.57
ABCD4-214ENST00000489678 CEP55Q53EZ4 464 aa11.52□□□□□ -0.57
ABCD4-214ENST00000489678 KANK3Q6NY19 840 aa11.52□□□□□ -0.57
ABCD4-214ENST00000489678 ENOX1Q8TC92 643 aaKnown RBP11.52□□□□□ -0.57
ABCD4-214ENST00000489678 C12orf42Q96LP6 360 aa11.52□□□□□ -0.57
ABCD4-214ENST00000489678 PARK7Q99497 189 aaKnown RBP11.52□□□□□ -0.57
ABCD4-214ENST00000489678 ARID3AQ99856 593 aa11.52□□□□□ -0.57
ABCD4-214ENST00000489678 RNF186Q9NXI6 227 aa11.52□□□□□ -0.57
ABCD4-214ENST00000489678 GJB1P08034 283 aa11.51□□□□□ -0.57
ABCD4-214ENST00000489678 HOXA7P31268 230 aaPredicted RBP11.51□□□□□ -0.57
ABCD4-214ENST00000489678 FLT3LGP49771 235 aa11.51□□□□□ -0.57
ABCD4-214ENST00000489678 MMP14P50281 582 aa11.51□□□□□ -0.57
ABCD4-214ENST00000489678 DPYDQ12882 1025 aa11.51□□□□□ -0.57
ABCD4-214ENST00000489678 MCM6Q14566 821 aa11.51□□□□□ -0.57
ABCD4-214ENST00000489678 E2F4Q16254 413 aa11.51□□□□□ -0.57
ABCD4-214ENST00000489678 UGCGQ16739 394 aa11.51□□□□□ -0.57
ABCD4-214ENST00000489678 HSDL1Q3SXM5 330 aa11.51□□□□□ -0.57
ABCD4-214ENST00000489678 C4orf32Q8N8J7 132 aa11.51□□□□□ -0.57
ABCD4-214ENST00000489678 TRIML1Q8N9V2 468 aa11.51□□□□□ -0.57
ABCD4-214ENST00000489678 PPP1R13BQ96KQ4 1090 aa11.51□□□□□ -0.57
ABCD4-214ENST00000489678 MTRQ99707 1265 aa11.51□□□□□ -0.57
ABCD4-214ENST00000489678 MED24O75448 989 aa11.51□□□□□ -0.57
ABCD4-214ENST00000489678 ZNF286BP0CG31 522 aa11.51□□□□□ -0.57
ABCD4-214ENST00000489678 PLCG1P19174 1290 aa11.51□□□□□ -0.57
ABCD4-214ENST00000489678 CCT6AP40227 531 aaKnown RBP11.51□□□□□ -0.57
ABCD4-214ENST00000489678 CDR1P51861 262 aa11.51□□□□□ -0.57
ABCD4-214ENST00000489678 LRRC41Q15345 812 aa11.51□□□□□ -0.57
ABCD4-214ENST00000489678 PAXBP1Q9Y5B6 917 aa11.51□□□□□ -0.57
ABCD4-214ENST00000489678 CBFA2T2O43439 604 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms