RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 PCDHA10Q9Y5I2 948 aa15.62■□□□□ 0.09
C9orf3-221ENST00000489562 POTEMA6NI47 508 aa15.61■□□□□ 0.09
C9orf3-221ENST00000489562 CCND3P30281 292 aaPredicted RBP15.61■□□□□ 0.09
C9orf3-221ENST00000489562 UBA7P41226 1012 aa15.61■□□□□ 0.09
C9orf3-221ENST00000489562 ACTR2P61160 394 aa15.61■□□□□ 0.09
C9orf3-221ENST00000489562 EPHA7Q15375 998 aa15.61■□□□□ 0.09
C9orf3-221ENST00000489562 KRT79Q5XKE5 535 aa15.61■□□□□ 0.09
C9orf3-221ENST00000489562 MIS18BP1Q6P0N0 1132 aa15.61■□□□□ 0.09
C9orf3-221ENST00000489562 TLK2Q86UE8 772 aa15.61■□□□□ 0.09
C9orf3-221ENST00000489562 OR6J1Q8NGC5 347 aa15.61■□□□□ 0.09
C9orf3-221ENST00000489562 SH3TC2Q8TF17 1288 aa15.61■□□□□ 0.09
C9orf3-221ENST00000489562 SEPT1Q8WYJ6 367 aa15.61■□□□□ 0.09
C9orf3-221ENST00000489562 COPS5Q92905 334 aa15.61■□□□□ 0.09
C9orf3-221ENST00000489562 SPATA33Q96N06 139 aa15.61■□□□□ 0.09
C9orf3-221ENST00000489562 CLIC6Q96NY7 704 aa15.61■□□□□ 0.09
C9orf3-221ENST00000489562 CCSER1Q9C0I3 900 aa15.61■□□□□ 0.09
C9orf3-221ENST00000489562 SPC25Q9HBM1 224 aa15.61■□□□□ 0.09
C9orf3-221ENST00000489562 DISC1Q9NRI5 854 aa15.61■□□□□ 0.09
C9orf3-221ENST00000489562 SAMM50Q9Y512 469 aa15.61■□□□□ 0.09
C9orf3-221ENST00000489562 DDX11L8A8MPP1 907 aa15.6■□□□□ 0.09
C9orf3-221ENST00000489562 ADCY6O43306 1168 aa15.6■□□□□ 0.09
C9orf3-221ENST00000489562 CHMP2AO43633 222 aa15.6■□□□□ 0.09
C9orf3-221ENST00000489562 ATG7O95352 703 aa15.6■□□□□ 0.09
C9orf3-221ENST00000489562 CCNE2O96020 404 aa15.6■□□□□ 0.09
C9orf3-221ENST00000489562 PSAPP07602 524 aa15.6■□□□□ 0.09
C9orf3-221ENST00000489562 PTMSP20962 102 aa15.6■□□□□ 0.09
C9orf3-221ENST00000489562 MUTP22033 750 aa15.6■□□□□ 0.09
C9orf3-221ENST00000489562 CMA1P23946 247 aa15.6■□□□□ 0.09
C9orf3-221ENST00000489562 UBE2HP62256 183 aa15.6■□□□□ 0.09
C9orf3-221ENST00000489562 NKX3-2P78367 333 aa15.6■□□□□ 0.09
C9orf3-221ENST00000489562 GRIN1Q05586 938 aa15.6■□□□□ 0.09
C9orf3-221ENST00000489562 KCTD17Q8N5Z5 321 aa15.6■□□□□ 0.09
C9orf3-221ENST00000489562 GPR20Q99678 358 aa15.6■□□□□ 0.09
C9orf3-221ENST00000489562 UPF3AQ9H1J1 476 aaKnown RBP15.6■□□□□ 0.09
C9orf3-221ENST00000489562 FAM13BQ9NYF5 915 aa15.6■□□□□ 0.09
C9orf3-221ENST00000489562 DDX20Q9UHI6 824 aaKnown RBP15.6■□□□□ 0.09
C9orf3-221ENST00000489562 KDM3AQ9Y4C1 1321 aa15.6■□□□□ 0.09
C9orf3-221ENST00000489562 KAT6AQ92794 2004 aa15.6■□□□□ 0.09
C9orf3-221ENST00000489562 EML1O00423 815 aa15.59■□□□□ 0.09
C9orf3-221ENST00000489562 DYNC1LI2O43237 492 aaPredicted RBP15.59■□□□□ 0.09
C9orf3-221ENST00000489562 DKC1O60832 514 aaKnown RBP eCLIP15.59■□□□□ 0.09
C9orf3-221ENST00000489562 PRPF40AO75400 957 aaKnown RBP15.59■□□□□ 0.09
C9orf3-221ENST00000489562 SUPT20HL2P0C7V6 817 aa15.59■□□□□ 0.09
C9orf3-221ENST00000489562 HOXD8P13378 290 aaPredicted RBP15.59■□□□□ 0.09
C9orf3-221ENST00000489562 RPA1P27694 616 aa15.59■□□□□ 0.09
C9orf3-221ENST00000489562 CPT1AP50416 773 aa15.59■□□□□ 0.09
C9orf3-221ENST00000489562 GJA9P57773 515 aa15.59■□□□□ 0.09
C9orf3-221ENST00000489562 SP4Q02446 784 aa15.59■□□□□ 0.09
C9orf3-221ENST00000489562 GJC2Q5T442 439 aaPredicted RBP15.59■□□□□ 0.09
C9orf3-221ENST00000489562 RESP18Q5W5W9 173 aa15.59■□□□□ 0.09
C9orf3-221ENST00000489562 ABHD15Q6UXT9 468 aa15.59■□□□□ 0.09
C9orf3-221ENST00000489562 SNX29Q8TEQ0 813 aa15.59■□□□□ 0.09
C9orf3-221ENST00000489562 MRPS27Q92552 414 aaKnown RBP15.59■□□□□ 0.09
C9orf3-221ENST00000489562 SYMPKQ92797 1274 aaKnown RBP15.59■□□□□ 0.09
C9orf3-221ENST00000489562 ARMC5Q96C12 935 aa15.59■□□□□ 0.09
C9orf3-221ENST00000489562 CALML4Q96GE6 196 aa15.59■□□□□ 0.09
C9orf3-221ENST00000489562 PYM1Q9BRP8 204 aaKnown RBP15.59■□□□□ 0.09
C9orf3-221ENST00000489562 POLR3CQ9BUI4 534 aaPredicted RBP15.59■□□□□ 0.09
C9orf3-221ENST00000489562 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.59■□□□□ 0.09
C9orf3-221ENST00000489562 NT5C3AQ9H0P0 336 aa15.59■□□□□ 0.09
C9orf3-221ENST00000489562 BCAS3Q9H6U6 928 aa15.59■□□□□ 0.09
C9orf3-221ENST00000489562 TUFT1Q9NNX1 390 aa15.59■□□□□ 0.09
C9orf3-221ENST00000489562 CCDC39Q9UFE4 941 aa15.59■□□□□ 0.09
C9orf3-221ENST00000489562 GSTTP1A0A1W2PQM5 241 aa15.58■□□□□ 0.08
C9orf3-221ENST00000489562 A6NJR5 290 aa15.58■□□□□ 0.08
C9orf3-221ENST00000489562 PPFIA4O75335 1185 aa15.58■□□□□ 0.08
C9orf3-221ENST00000489562 P4HBP07237 508 aaKnown RBP15.58■□□□□ 0.08
C9orf3-221ENST00000489562 MCM4P33991 863 aa15.58■□□□□ 0.08
C9orf3-221ENST00000489562 DGKDQ16760 1214 aa15.58■□□□□ 0.08
C9orf3-221ENST00000489562 HSDL1Q3SXM5 330 aa15.58■□□□□ 0.08
C9orf3-221ENST00000489562 TMEM63BQ5T3F8 832 aa15.58■□□□□ 0.08
C9orf3-221ENST00000489562 FAM160B1Q5W0V3 765 aa15.58■□□□□ 0.08
C9orf3-221ENST00000489562 SHC4Q6S5L8 630 aa15.58■□□□□ 0.08
C9orf3-221ENST00000489562 CABP7Q86V35 215 aa15.58■□□□□ 0.08
C9orf3-221ENST00000489562 AFG1LQ8WV93 481 aa15.58■□□□□ 0.08
C9orf3-221ENST00000489562 ATP6V0A1Q93050 837 aa15.58■□□□□ 0.08
C9orf3-221ENST00000489562 EIF2AK1Q9BQI3 630 aaKnown RBP15.58■□□□□ 0.08
C9orf3-221ENST00000489562 AZI2Q9H6S1 392 aa15.58■□□□□ 0.08
C9orf3-221ENST00000489562 XPNPEP3Q9NQH7 507 aa15.58■□□□□ 0.08
C9orf3-221ENST00000489562 EMSYQ7Z589 1322 aa15.58■□□□□ 0.08
C9orf3-221ENST00000489562 IGKV6D-21A0A0A0MT36 114 aa15.57■□□□□ 0.08
C9orf3-221ENST00000489562 FAM237AA0A1B0GTK4 181 aa15.57■□□□□ 0.08
C9orf3-221ENST00000489562 BACH1O14867 736 aa15.57■□□□□ 0.08
C9orf3-221ENST00000489562 ZEB2O60315 1214 aa15.57■□□□□ 0.08
C9orf3-221ENST00000489562 SORBS3O60504 671 aa15.57■□□□□ 0.08
C9orf3-221ENST00000489562 KPNA6O60684 536 aa15.57■□□□□ 0.08
C9orf3-221ENST00000489562 MMP3P08254 477 aa15.57■□□□□ 0.08
C9orf3-221ENST00000489562 CST5P28325 142 aaPredicted RBP15.57■□□□□ 0.08
C9orf3-221ENST00000489562 TCF7P36402 384 aaPredicted RBP15.57■□□□□ 0.08
C9orf3-221ENST00000489562 CCT6AP40227 531 aaKnown RBP15.57■□□□□ 0.08
C9orf3-221ENST00000489562 QARSP47897 775 aaKnown RBP15.57■□□□□ 0.08
C9orf3-221ENST00000489562 SLC26A2P50443 739 aa15.57■□□□□ 0.08
C9orf3-221ENST00000489562 PSMC5P62195 406 aa15.57■□□□□ 0.08
C9orf3-221ENST00000489562 FSCN1Q16658 493 aaKnown RBP15.57■□□□□ 0.08
C9orf3-221ENST00000489562 HYIQ5T013 277 aa15.57■□□□□ 0.08
C9orf3-221ENST00000489562 CCDC73Q6ZRK6 1079 aa15.57■□□□□ 0.08
C9orf3-221ENST00000489562 FSIP1Q8NA03 581 aa15.57■□□□□ 0.08
C9orf3-221ENST00000489562 RASSF8Q8NHQ8 419 aa15.57■□□□□ 0.08
C9orf3-221ENST00000489562 AFAP1L1Q8TED9 768 aa15.57■□□□□ 0.08
C9orf3-221ENST00000489562 EPSTI1Q96J88 318 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms