RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 RAB11FIP4Q86YS3 637 aa9.04□□□□□ -0.96
SMC6-209ENST00000489535 C2CD4AQ8NCU7 369 aaPredicted RBP9.04□□□□□ -0.96
SMC6-209ENST00000489535 FAM200AQ8TCP9 573 aa9.04□□□□□ -0.96
SMC6-209ENST00000489535 GPR152Q8TDT2 470 aa9.04□□□□□ -0.96
SMC6-209ENST00000489535 IGDCC4Q8TDY8 1250 aa9.04□□□□□ -0.96
SMC6-209ENST00000489535 DYNLL2Q96FJ2 89 aa9.04□□□□□ -0.96
SMC6-209ENST00000489535 MTA3Q9BTC8 594 aa9.04□□□□□ -0.96
SMC6-209ENST00000489535 DDX4Q9NQI0 724 aaKnown RBP9.04□□□□□ -0.96
SMC6-209ENST00000489535 TNKSO95271 1327 aa9.04□□□□□ -0.96
SMC6-209ENST00000489535 TSPY2A6NKD2 308 aa9.03□□□□□ -0.96
SMC6-209ENST00000489535 WDHD1O75717 1129 aaPredicted RBP9.03□□□□□ -0.96
SMC6-209ENST00000489535 LIFRP42702 1097 aa9.03□□□□□ -0.96
SMC6-209ENST00000489535 PLCD1P51178 756 aa9.03□□□□□ -0.96
SMC6-209ENST00000489535 USP11P51784 963 aa9.03□□□□□ -0.96
SMC6-209ENST00000489535 CXCL9Q07325 125 aa9.03□□□□□ -0.96
SMC6-209ENST00000489535 FAM47AQ5JRC9 791 aa9.03□□□□□ -0.96
SMC6-209ENST00000489535 CIAPIN1Q6FI81 312 aa9.03□□□□□ -0.96
SMC6-209ENST00000489535 IQCA1Q86XH1 822 aa9.03□□□□□ -0.96
SMC6-209ENST00000489535 AGBL3Q8NEM8 1001 aa9.03□□□□□ -0.96
SMC6-209ENST00000489535 TNPO1Q92973 898 aaKnown RBP9.03□□□□□ -0.96
SMC6-209ENST00000489535 CHMP4CQ96CF2 233 aa9.03□□□□□ -0.96
SMC6-209ENST00000489535 PRIMPOLQ96LW4 560 aa9.03□□□□□ -0.96
SMC6-209ENST00000489535 HHIPQ96QV1 700 aa9.03□□□□□ -0.96
SMC6-209ENST00000489535 LLPHQ9BRT6 129 aaKnown RBP9.03□□□□□ -0.96
SMC6-209ENST00000489535 UBAC1Q9BSL1 405 aa9.03□□□□□ -0.96
SMC6-209ENST00000489535 OSBPL5Q9H0X9 879 aaPredicted RBP9.03□□□□□ -0.96
SMC6-209ENST00000489535 MKNK2Q9HBH9 465 aa9.03□□□□□ -0.96
SMC6-209ENST00000489535 NCOA5Q9HCD5 579 aaKnown RBP9.03□□□□□ -0.96
SMC6-209ENST00000489535 DZANK1Q9NVP4 752 aa9.03□□□□□ -0.96
SMC6-209ENST00000489535 TMEM63CQ9P1W3 806 aa9.03□□□□□ -0.96
SMC6-209ENST00000489535 HDAC9Q9UKV0 1011 aa9.03□□□□□ -0.96
SMC6-209ENST00000489535 GOLGB1Q14789 3259 aaKnown RBP9.02□□□□□ -0.97
SMC6-209ENST00000489535 GOLGA8AA7E2F4 631 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 PDE2AO00408 941 aaPredicted RBP9.02□□□□□ -0.97
SMC6-209ENST00000489535 BIN1O00499 593 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 SOX1O00570 391 aaPredicted RBP9.02□□□□□ -0.97
SMC6-209ENST00000489535 ZBTB43O43298 467 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 JAK2O60674 1132 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 HLA-DOAP06340 250 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 RXRAP19793 462 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 LMOD1P29536 600 aaPredicted RBP9.02□□□□□ -0.97
SMC6-209ENST00000489535 CDK8P49336 464 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 METAP2P50579 478 aaKnown RBP eCLIP9.02□□□□□ -0.97
SMC6-209ENST00000489535 CACNB3P54284 484 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 TNIP1Q15025 636 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 SEC23AQ15436 765 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 ZNF792Q3KQV3 632 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 APOA5Q6Q788 366 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 SYNE3Q6ZMZ3 975 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 ZNF574Q6ZN55 896 aaPredicted RBP9.02□□□□□ -0.97
SMC6-209ENST00000489535 C16orf86Q6ZW13 317 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 TTC6Q86TZ1 520 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 SGMS1Q86VZ5 419 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 TMTC2Q8N394 836 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 NSUN7Q8NE18 718 aaKnown RBP9.02□□□□□ -0.97
SMC6-209ENST00000489535 SMARCC2Q8TAQ2 1214 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 BCL7CQ8WUZ0 217 aaPredicted RBP9.02□□□□□ -0.97
SMC6-209ENST00000489535 DDX11Q96FC9 970 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 GMLQ99445 158 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 KRTAP9-8Q9BYQ0 159 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 TDRD3Q9H7E2 651 aaKnown RBP9.02□□□□□ -0.97
SMC6-209ENST00000489535 ZNF287Q9HBT7 754 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 CNTN3Q9P232 1028 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 ZDHHC9Q9Y397 364 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 SCN4AP35499 1836 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 PARP14Q460N5 1801 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 PHIPQ8WWQ0 1821 aa9.02□□□□□ -0.97
SMC6-209ENST00000489535 WDR33Q9C0J8 1336 aaKnown RBP9.02□□□□□ -0.97
SMC6-209ENST00000489535 COL2A1P02458 1487 aaPredicted RBP9.02□□□□□ -0.97
SMC6-209ENST00000489535 NID2Q14112 1375 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 OTOFQ9HC10 1997 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 PTPDC1A2A3K4 754 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 STX6O43752 255 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 TRPA1O75762 1119 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 CTDNEP1O95476 244 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 BRD1O95696 1058 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 TSPY3P0CV98 308 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 TSPY8P0CW00 308 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 SYT1P21579 422 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 NT5C2P49902 561 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 PRELPP51888 382 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 EIF6P56537 245 aaKnown RBP9.01□□□□□ -0.97
SMC6-209ENST00000489535 TFAP4Q01664 338 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 DLGAP5Q15398 846 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 IFIT1BQ5T764 474 aaKnown RBP9.01□□□□□ -0.97
SMC6-209ENST00000489535 ARHGAP27Q6ZUM4 889 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 MICU3Q86XE3 530 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 CCDC144CPQ8IYA2 1237 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 ZNF654Q8IZM8 581 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 ZNF444Q8N0Y2 327 aaPredicted RBP9.01□□□□□ -0.97
SMC6-209ENST00000489535 ENAHQ8N8S7 591 aaPredicted RBP9.01□□□□□ -0.97
SMC6-209ENST00000489535 FAM184AQ8NB25 1140 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 SLC44A5Q8NCS7 719 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 PRMT6Q96LA8 375 aaPredicted RBP9.01□□□□□ -0.97
SMC6-209ENST00000489535 GBP4Q96PP9 640 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 MYL10Q9BUA6 226 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 IDI2Q9BXS1 227 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 ELP3Q9H9T3 547 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 LRRC4CQ9HCJ2 640 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 TMOD2Q9NZR1 351 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms