RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 DIS3L2Q8IYB7 885 aaKnown RBP13.93□□□□□ -0.18
SMARCD3-213ENST00000489503 FAM177A1Q8N128 213 aaPredicted RBP13.93□□□□□ -0.18
SMARCD3-213ENST00000489503 C7orf31Q8N865 590 aa13.93□□□□□ -0.18
SMARCD3-213ENST00000489503 TNFRSF25Q93038 417 aa13.93□□□□□ -0.18
SMARCD3-213ENST00000489503 PCYT2Q99447 389 aa13.93□□□□□ -0.18
SMARCD3-213ENST00000489503 LLPHQ9BRT6 129 aaKnown RBP13.93□□□□□ -0.18
SMARCD3-213ENST00000489503 ZNF577Q9BSK1 485 aa13.93□□□□□ -0.18
SMARCD3-213ENST00000489503 NOC4LQ9BVI4 516 aaKnown RBP13.93□□□□□ -0.18
SMARCD3-213ENST00000489503 KATNAL1Q9BW62 490 aa13.93□□□□□ -0.18
SMARCD3-213ENST00000489503 WNT8AQ9H1J5 351 aa13.93□□□□□ -0.18
SMARCD3-213ENST00000489503 HIPK3Q9H422 1215 aa13.93□□□□□ -0.18
SMARCD3-213ENST00000489503 TUT1Q9H6E5 874 aaKnown RBP13.93□□□□□ -0.18
SMARCD3-213ENST00000489503 GTF2IRD1Q9UHL9 959 aa13.93□□□□□ -0.18
SMARCD3-213ENST00000489503 SCN5AQ14524 2016 aa13.93□□□□□ -0.18
SMARCD3-213ENST00000489503 BTBD18B2RXH4 712 aa13.92□□□□□ -0.18
SMARCD3-213ENST00000489503 IPO5O00410 1097 aaKnown RBP13.92□□□□□ -0.18
SMARCD3-213ENST00000489503 WNT7AO00755 349 aa13.92□□□□□ -0.18
SMARCD3-213ENST00000489503 MSH4O15457 936 aa13.92□□□□□ -0.18
SMARCD3-213ENST00000489503 MAFGO15525 162 aa13.92□□□□□ -0.18
SMARCD3-213ENST00000489503 DHX15O43143 795 aaKnown RBP13.92□□□□□ -0.18
SMARCD3-213ENST00000489503 SLC37A4O43826 429 aa13.92□□□□□ -0.18
SMARCD3-213ENST00000489503 TIMP1P01033 207 aa13.92□□□□□ -0.18
SMARCD3-213ENST00000489503 SMIM10L2AP0DMW4 78 aa13.92□□□□□ -0.18
SMARCD3-213ENST00000489503 SMIM10L2BP0DMW5 78 aa13.92□□□□□ -0.18
SMARCD3-213ENST00000489503 CCL23P55773 120 aa13.92□□□□□ -0.18
SMARCD3-213ENST00000489503 TRIM29Q14134 588 aa13.92□□□□□ -0.18
SMARCD3-213ENST00000489503 PTGISQ16647 500 aa13.92□□□□□ -0.18
SMARCD3-213ENST00000489503 LETM2Q2VYF4 491 aa13.92□□□□□ -0.18
SMARCD3-213ENST00000489503 SEPT1Q8WYJ6 367 aa13.92□□□□□ -0.18
SMARCD3-213ENST00000489503 DHX38Q92620 1227 aaKnown RBP13.92□□□□□ -0.18
SMARCD3-213ENST00000489503 WNT8BQ93098 351 aa13.92□□□□□ -0.18
SMARCD3-213ENST00000489503 C8orf76Q96K31 380 aa13.92□□□□□ -0.18
SMARCD3-213ENST00000489503 NOD1Q9Y239 953 aa13.92□□□□□ -0.18
SMARCD3-213ENST00000489503 RANBP2P49792 3224 aaKnown RBP13.92□□□□□ -0.18
SMARCD3-213ENST00000489503 CHMP2AO43633 222 aa13.91□□□□□ -0.18
SMARCD3-213ENST00000489503 USP11P51784 963 aa13.91□□□□□ -0.18
SMARCD3-213ENST00000489503 HMGN5P82970 282 aaKnown RBP13.91□□□□□ -0.18
SMARCD3-213ENST00000489503 PTPN11Q06124 597 aaPredicted RBP13.91□□□□□ -0.18
SMARCD3-213ENST00000489503 HABP4Q5JVS0 413 aaKnown RBP13.91□□□□□ -0.18
SMARCD3-213ENST00000489503 C9orf50Q5SZB4 431 aa13.91□□□□□ -0.18
SMARCD3-213ENST00000489503 SESTD1Q86VW0 696 aa13.91□□□□□ -0.18
SMARCD3-213ENST00000489503 FAM184AQ8NB25 1140 aa13.91□□□□□ -0.18
SMARCD3-213ENST00000489503 GLG1Q92896 1179 aa13.91□□□□□ -0.18
SMARCD3-213ENST00000489503 SCLYQ96I15 445 aa13.91□□□□□ -0.18
SMARCD3-213ENST00000489503 RNPEPQ9H4A4 650 aa13.91□□□□□ -0.18
SMARCD3-213ENST00000489503 BRMS1Q9HCU9 246 aa13.91□□□□□ -0.18
SMARCD3-213ENST00000489503 ZNF215Q9UL58 517 aaPredicted RBP13.91□□□□□ -0.18
SMARCD3-213ENST00000489503 EMSYQ7Z589 1322 aa13.9□□□□□ -0.18
SMARCD3-213ENST00000489503 ACRP10323 421 aa13.9□□□□□ -0.18
SMARCD3-213ENST00000489503 CSF2RAP15509 400 aa13.9□□□□□ -0.18
SMARCD3-213ENST00000489503 FPGSQ05932 587 aa13.9□□□□□ -0.18
SMARCD3-213ENST00000489503 NEK8Q86SG6 692 aa13.9□□□□□ -0.18
SMARCD3-213ENST00000489503 CCDC60Q8IWA6 550 aaPredicted RBP13.9□□□□□ -0.18
SMARCD3-213ENST00000489503 SLC5A5Q92911 643 aa13.9□□□□□ -0.18
SMARCD3-213ENST00000489503 ZBTB10Q96DT7 871 aa13.9□□□□□ -0.18
SMARCD3-213ENST00000489503 MBOAT7Q96N66 472 aa13.9□□□□□ -0.18
SMARCD3-213ENST00000489503 SEZ6LQ9BYH1 1024 aa13.9□□□□□ -0.18
SMARCD3-213ENST00000489503 SETD4Q9NVD3 440 aa13.9□□□□□ -0.18
SMARCD3-213ENST00000489503 DDX25Q9UHL0 483 aaKnown RBP13.9□□□□□ -0.18
SMARCD3-213ENST00000489503 WDR81Q562E7 1941 aa13.9□□□□□ -0.18
SMARCD3-213ENST00000489503 CYP3A7-CYP3A51PA0A087WV96 503 aa13.89□□□□□ -0.19
SMARCD3-213ENST00000489503 C17orf102A2RUQ5 167 aa13.89□□□□□ -0.19
SMARCD3-213ENST00000489503 KIF28PB7ZC32 967 aa13.89□□□□□ -0.19
SMARCD3-213ENST00000489503 BACH1O14867 736 aa13.89□□□□□ -0.19
SMARCD3-213ENST00000489503 TREHO43280 583 aa13.89□□□□□ -0.19
SMARCD3-213ENST00000489503 CCNT1O60563 726 aaKnown RBP13.89□□□□□ -0.19
SMARCD3-213ENST00000489503 GAS7O60861 476 aa13.89□□□□□ -0.19
SMARCD3-213ENST00000489503 LGR5O75473 907 aa13.89□□□□□ -0.19
SMARCD3-213ENST00000489503 SUPT20HL2P0C7V6 817 aa13.89□□□□□ -0.19
SMARCD3-213ENST00000489503 CYP3A7P24462 503 aa13.89□□□□□ -0.19
SMARCD3-213ENST00000489503 BMP8BP34820 402 aa13.89□□□□□ -0.19
SMARCD3-213ENST00000489503 Q4G0T1 1027 aa13.89□□□□□ -0.19
SMARCD3-213ENST00000489503 LRCH2Q5VUJ6 765 aa13.89□□□□□ -0.19
SMARCD3-213ENST00000489503 MFSD5Q6N075 450 aa13.89□□□□□ -0.19
SMARCD3-213ENST00000489503 POTEDQ86YR6 584 aa13.89□□□□□ -0.19
SMARCD3-213ENST00000489503 ETNPPLQ8TBG4 499 aa13.89□□□□□ -0.19
SMARCD3-213ENST00000489503 LMBR1Q8WVP7 490 aa13.89□□□□□ -0.19
SMARCD3-213ENST00000489503 UNC45AQ9H3U1 944 aa13.89□□□□□ -0.19
SMARCD3-213ENST00000489503 SOX1O00570 391 aaPredicted RBP13.88□□□□□ -0.19
SMARCD3-213ENST00000489503 ATP2B1P20020 1258 aa13.88□□□□□ -0.19
SMARCD3-213ENST00000489503 GJB2P29033 226 aa13.88□□□□□ -0.19
SMARCD3-213ENST00000489503 HOXC8P31273 242 aa13.88□□□□□ -0.19
SMARCD3-213ENST00000489503 MCM2P49736 904 aa13.88□□□□□ -0.19
SMARCD3-213ENST00000489503 IGBP1P78318 339 aa13.88□□□□□ -0.19
SMARCD3-213ENST00000489503 PPFIA1Q13136 1202 aa13.88□□□□□ -0.19
SMARCD3-213ENST00000489503 PLCB4Q15147 1175 aa13.88□□□□□ -0.19
SMARCD3-213ENST00000489503 SHHQ15465 462 aa13.88□□□□□ -0.19
SMARCD3-213ENST00000489503 MOXD1Q6UVY6 613 aa13.88□□□□□ -0.19
SMARCD3-213ENST00000489503 ABHD15Q6UXT9 468 aa13.88□□□□□ -0.19
SMARCD3-213ENST00000489503 TDHQ8IZJ6 230 aa13.88□□□□□ -0.19
SMARCD3-213ENST00000489503 TRAPPC12Q8WVT3 735 aa13.88□□□□□ -0.19
SMARCD3-213ENST00000489503 ATP6V0A1Q93050 837 aa13.88□□□□□ -0.19
SMARCD3-213ENST00000489503 TEKT3Q9BXF9 490 aa13.88□□□□□ -0.19
SMARCD3-213ENST00000489503 SMARCAD1Q9H4L7 1026 aa13.88□□□□□ -0.19
SMARCD3-213ENST00000489503 AZI2Q9H6S1 392 aa13.88□□□□□ -0.19
SMARCD3-213ENST00000489503 TBC1D22BQ9NU19 505 aa13.88□□□□□ -0.19
SMARCD3-213ENST00000489503 ERAP1Q9NZ08 941 aa13.88□□□□□ -0.19
SMARCD3-213ENST00000489503 TCEAL9Q9UHQ7 104 aa13.88□□□□□ -0.19
SMARCD3-213ENST00000489503 TRPC6Q9Y210 931 aa13.88□□□□□ -0.19
SMARCD3-213ENST00000489503 KAT6AQ92794 2004 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms