RNA–Protein interactions for RNA: ENST00000489283.5

PLS3-207, Transcript of plastin 3, humanhuman

TSL 1 (best)

Gene PLS3, Length 926 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-207ENST00000489283 PPP1R18Q6NYC8 613 aa16.1■□□□□ 0.17
PLS3-207ENST00000489283 SYMPKQ92797 1274 aaKnown RBP16.1■□□□□ 0.17
PLS3-207ENST00000489283 PGBD1Q96JS3 809 aa16.1■□□□□ 0.17
PLS3-207ENST00000489283 ZBED2Q9BTP6 218 aa16.1■□□□□ 0.17
PLS3-207ENST00000489283 EHMT1Q9H9B1 1298 aa16.1■□□□□ 0.17
PLS3-207ENST00000489283 SPTBN5Q9NRC6 3674 aaKnown RBP16.09■□□□□ 0.17
PLS3-207ENST00000489283 PRRC2BQ5JSZ5 2229 aaKnown RBP16.09■□□□□ 0.17
PLS3-207ENST00000489283 CAND2O75155 1236 aa16.09■□□□□ 0.17
PLS3-207ENST00000489283 GJB5O95377 273 aa16.09■□□□□ 0.17
PLS3-207ENST00000489283 GNAT1P11488 350 aa16.09■□□□□ 0.17
PLS3-207ENST00000489283 CPA1P15085 419 aa16.09■□□□□ 0.17
PLS3-207ENST00000489283 CDC27P30260 824 aa16.09■□□□□ 0.17
PLS3-207ENST00000489283 ADAM17P78536 824 aa16.09■□□□□ 0.17
PLS3-207ENST00000489283 MKRN4PQ13434 485 aaPredicted RBP16.09■□□□□ 0.17
PLS3-207ENST00000489283 PLEKHG4Q58EX7 1191 aa16.09■□□□□ 0.17
PLS3-207ENST00000489283 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.09■□□□□ 0.17
PLS3-207ENST00000489283 DBF4BQ8NFT6 615 aa16.09■□□□□ 0.17
PLS3-207ENST00000489283 ATXN2LQ8WWM7 1075 aaKnown RBP16.09■□□□□ 0.17
PLS3-207ENST00000489283 RIC8AQ9NPQ8 531 aa16.09■□□□□ 0.17
PLS3-207ENST00000489283 JADE2Q9NQC1 790 aa16.09■□□□□ 0.17
PLS3-207ENST00000489283 NAP1L2Q9ULW6 460 aaPredicted RBP16.09■□□□□ 0.17
PLS3-207ENST00000489283 MTCH2Q9Y6C9 303 aa16.09■□□□□ 0.17
PLS3-207ENST00000489283 TRANK1O15050 2925 aa16.09■□□□□ 0.17
PLS3-207ENST00000489283 LOXHD1Q8IVV2 1947 aa16.09■□□□□ 0.17
PLS3-207ENST00000489283 GSTTP1A0A1W2PQM5 241 aa16.08■□□□□ 0.16
PLS3-207ENST00000489283 hCG_1984214I3L0E3 225 aa16.08■□□□□ 0.16
PLS3-207ENST00000489283 STXBP3O00186 592 aa16.08■□□□□ 0.16
PLS3-207ENST00000489283 GTPBP6O43824 516 aaPredicted RBP16.08■□□□□ 0.16
PLS3-207ENST00000489283 HMGB1P09429 215 aaKnown RBP16.08■□□□□ 0.16
PLS3-207ENST00000489283 POU3F3P20264 500 aaPredicted RBP16.08■□□□□ 0.16
PLS3-207ENST00000489283 ADCY7P51828 1080 aa16.08■□□□□ 0.16
PLS3-207ENST00000489283 KRT40Q6A162 431 aa16.08■□□□□ 0.16
PLS3-207ENST00000489283 FAM117BQ6P1L5 589 aa16.08■□□□□ 0.16
PLS3-207ENST00000489283 ZNF713Q8N859 430 aaPredicted RBP16.08■□□□□ 0.16
PLS3-207ENST00000489283 SEPT1Q8WYJ6 367 aa16.08■□□□□ 0.16
PLS3-207ENST00000489283 CCDC136Q96JN2 1154 aa16.08■□□□□ 0.16
PLS3-207ENST00000489283 OSBPL7Q9BZF2 842 aa16.08■□□□□ 0.16
PLS3-207ENST00000489283 FAM217BQ9NTX9 383 aaPredicted RBP16.08■□□□□ 0.16
PLS3-207ENST00000489283 V9GY48 417 aaPredicted RBP16.08■□□□□ 0.16
PLS3-207ENST00000489283 RALGAPA2Q2PPJ7 1873 aa16.08■□□□□ 0.16
PLS3-207ENST00000489283 AMHP03971 560 aa16.07■□□□□ 0.16
PLS3-207ENST00000489283 MARK3P27448 753 aa16.07■□□□□ 0.16
PLS3-207ENST00000489283 RCAN1P53805 252 aa16.07■□□□□ 0.16
PLS3-207ENST00000489283 FGD1P98174 961 aa16.07■□□□□ 0.16
PLS3-207ENST00000489283 PPFIA1Q13136 1202 aa16.07■□□□□ 0.16
PLS3-207ENST00000489283 GRB10Q13322 594 aa16.07■□□□□ 0.16
PLS3-207ENST00000489283 MYOCDQ8IZQ8 938 aa16.07■□□□□ 0.16
PLS3-207ENST00000489283 KCNB2Q92953 911 aa16.07■□□□□ 0.16
PLS3-207ENST00000489283 JAKMIP1Q96N16 626 aaKnown RBP16.07■□□□□ 0.16
PLS3-207ENST00000489283 RAD9AQ99638 391 aa16.07■□□□□ 0.16
PLS3-207ENST00000489283 MXRA8Q9BRK3 442 aa16.07■□□□□ 0.16
PLS3-207ENST00000489283 ANO3Q9BYT9 981 aa16.07■□□□□ 0.16
PLS3-207ENST00000489283 JPH1Q9HDC5 661 aaPredicted RBP16.07■□□□□ 0.16
PLS3-207ENST00000489283 TMEM260Q9NX78 707 aa16.07■□□□□ 0.16
PLS3-207ENST00000489283 BARHL2Q9NY43 387 aa16.07■□□□□ 0.16
PLS3-207ENST00000489283 ERAP1Q9NZ08 941 aa16.07■□□□□ 0.16
PLS3-207ENST00000489283 NRCAMQ92823 1304 aa16.07■□□□□ 0.16
PLS3-207ENST00000489283 TCF20Q9UGU0 1960 aaKnown RBP16.06■□□□□ 0.16
PLS3-207ENST00000489283 COL4A6Q14031 1691 aa16.06■□□□□ 0.16
PLS3-207ENST00000489283 NID2Q14112 1375 aa16.06■□□□□ 0.16
PLS3-207ENST00000489283 SMCO2A6NFE2 343 aa16.06■□□□□ 0.16
PLS3-207ENST00000489283 MAFGO15525 162 aa16.06■□□□□ 0.16
PLS3-207ENST00000489283 LPXNO60711 386 aa16.06■□□□□ 0.16
PLS3-207ENST00000489283 HSPA4P34932 840 aa16.06■□□□□ 0.16
PLS3-207ENST00000489283 METAP2P50579 478 aaKnown RBP eCLIP16.06■□□□□ 0.16
PLS3-207ENST00000489283 APOBRQ0VD83 1088 aa16.06■□□□□ 0.16
PLS3-207ENST00000489283 RUFY4Q6ZNE9 571 aa16.06■□□□□ 0.16
PLS3-207ENST00000489283 Q6ZUG5 572 aa16.06■□□□□ 0.16
PLS3-207ENST00000489283 CYP2W1Q8TAV3 490 aa16.06■□□□□ 0.16
PLS3-207ENST00000489283 GDPD5Q8WTR4 605 aa16.06■□□□□ 0.16
PLS3-207ENST00000489283 SEPT8Q92599 483 aa16.06■□□□□ 0.16
PLS3-207ENST00000489283 GLG1Q92896 1179 aa16.06■□□□□ 0.16
PLS3-207ENST00000489283 ASB2Q96Q27 587 aa16.06■□□□□ 0.16
PLS3-207ENST00000489283 TSPYL2Q9H2G4 693 aaPredicted RBP16.06■□□□□ 0.16
PLS3-207ENST00000489283 KCNH7Q9NS40 1196 aa16.06■□□□□ 0.16
PLS3-207ENST00000489283 MTUS1Q9ULD2 1270 aa16.06■□□□□ 0.16
PLS3-207ENST00000489283 SNX14Q9Y5W7 946 aa16.06■□□□□ 0.16
PLS3-207ENST00000489283 LINC01553A4QN01 128 aa16.05■□□□□ 0.16
PLS3-207ENST00000489283 FOSP01100 380 aaPredicted RBP16.05■□□□□ 0.16
PLS3-207ENST00000489283 CLK2P49760 499 aaKnown RBP16.05■□□□□ 0.16
PLS3-207ENST00000489283 MRPS5P82675 430 aaKnown RBP16.05■□□□□ 0.16
PLS3-207ENST00000489283 AP3B2Q13367 1082 aa16.05■□□□□ 0.16
PLS3-207ENST00000489283 SKIV2LQ15477 1246 aaKnown RBP16.05■□□□□ 0.16
PLS3-207ENST00000489283 GRIK4Q16099 956 aa16.05■□□□□ 0.16
PLS3-207ENST00000489283 FAM26DQ5JW98 314 aa16.05■□□□□ 0.16
PLS3-207ENST00000489283 BLOC1S2Q6QNY1 142 aa16.05■□□□□ 0.16
PLS3-207ENST00000489283 TEX2Q8IWB9 1127 aa16.05■□□□□ 0.16
PLS3-207ENST00000489283 BRF1Q92994 677 aa16.05■□□□□ 0.16
PLS3-207ENST00000489283 SMARCAD1Q9H4L7 1026 aa16.05■□□□□ 0.16
PLS3-207ENST00000489283 SLC9A2Q9UBY0 812 aa16.05■□□□□ 0.16
PLS3-207ENST00000489283 TUBE1Q9UJT0 475 aa16.05■□□□□ 0.16
PLS3-207ENST00000489283 WDR81Q562E7 1941 aa16.05■□□□□ 0.16
PLS3-207ENST00000489283 ATG2AQ2TAZ0 1938 aa16.04■□□□□ 0.16
PLS3-207ENST00000489283 NFASCO94856 1347 aa16.04■□□□□ 0.16
PLS3-207ENST00000489283 CHRNA1P02708 482 aa16.04■□□□□ 0.16
PLS3-207ENST00000489283 ARP10275 920 aa16.04■□□□□ 0.16
PLS3-207ENST00000489283 ADD1P35611 737 aaKnown RBP16.04■□□□□ 0.16
PLS3-207ENST00000489283 SREBF1P36956 1147 aa16.04■□□□□ 0.16
PLS3-207ENST00000489283 ERVK-21P61565 698 aa16.04■□□□□ 0.16
PLS3-207ENST00000489283 PFKFB3Q16875 520 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms