RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-231	ENST00000489261	C2orf69	Q8N8R5	385 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	KIF18A	Q8NI77	898 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	ZNF507	Q8TCN5	953 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	CLEC4D	Q8WXI8	215 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	TBC1D5	Q92609	795 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	NACC1	Q96RE7	527 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	HSD17B14	Q9BPX1	270 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	EIF2AK1	Q9BQI3	630 aa	Known RBP	12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	TUBGCP2	Q9BSJ2	902 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	TEKT3	Q9BXF9	490 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	SEMA6B	Q9H3T3	888 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	FBXO28	Q9NVF7	368 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	TAB2	Q9NYJ8	693 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	SCAF8	Q9UPN6	1271 aa	Known RBP	12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	MYPN	Q86TC9	1320 aa		12.04	□□□□□ -0.48
ITSN1-231	ENST00000489261	FAM155A	B1AL88	458 aa	Predicted RBP	12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	ATP2A1	O14983	1001 aa		12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	AOC2	O75106	756 aa		12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	SSB	P05455	408 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	VCAM1	P19320	739 aa		12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	MTIF2	P46199	727 aa	Known RBP	12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	ADK	P55263	362 aa	Known RBP	12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	FKBP3	Q00688	224 aa	Known RBP	12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	TBC1D8B	Q0IIM8	1120 aa		12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	SPP2	Q13103	211 aa		12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	HERC4	Q5GLZ8	1057 aa	Predicted RBP	12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	COL13A1	Q5TAT6	717 aa	Predicted RBP	12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	PCNX4	Q63HM2	1172 aa		12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	RGMB	Q6NW40	437 aa		12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	CREBRF	Q8IUR6	639 aa		12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	PPP1R13B	Q96KQ4	1090 aa		12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	C16orf45	Q96MC5	204 aa	Predicted RBP	12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	AGBL1	Q96MI9	1066 aa		12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	ZNF577	Q9BSK1	485 aa		12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	TANGO6	Q9C0B7	1094 aa		12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	RPAP3	Q9H6T3	665 aa	Predicted RBP	12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	HOXC10	Q9NYD6	342 aa		12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	TMOD4	Q9NZQ9	345 aa		12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	ADAMTS5	Q9UNA0	930 aa		12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	COL4A3BP	Q9Y5P4	624 aa		12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	FRMPD4	Q14CM0	1322 aa		12.03	□□□□□ -0.48
ITSN1-231	ENST00000489261	SSC5D	A1L4H1	1573 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	UQCRHL	A0A096LP55	91 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	MAFG	O15525	162 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	UQCRH	P07919	91 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	ALAS1	P13196	640 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	DSG3	P32926	999 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	STAT3	P40763	770 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	MTMR2	Q13614	643 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	GIT2	Q14161	759 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	COG2	Q14746	738 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	MAN2A1	Q16706	1144 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	EDRF1	Q3B7T1	1238 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	SH3D19	Q5HYK7	790 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	B3GNT9	Q6UX72	402 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	CCDC84	Q86UT8	332 aa	Predicted RBP	12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	OR8K1	Q8NGG5	319 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	CNOT6L	Q96LI5	555 aa	Known RBP	12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	ERGIC2	Q96RQ1	377 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	WRNIP1	Q96S55	665 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	NOC4L	Q9BVI4	516 aa	Known RBP	12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	EDEM3	Q9BZQ6	932 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	JADE2	Q9NQC1	790 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	TBC1D22B	Q9NU19	505 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	TRMT1	Q9NXH9	659 aa	Known RBP	12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	SEL1L	Q9UBV2	794 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	CAPN11	Q9UMQ6	739 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	PCDHA2	Q9Y5H9	948 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261	UBIAD1	Q9Y5Z9	338 aa		12.02	□□□□□ -0.49
ITSN1-231	ENST00000489261		A0A1W2PQJ5	194 aa		12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	IPO5	O00410	1097 aa	Known RBP	12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	VWA5A	O00534	786 aa		12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	SLITRK3	O94933	977 aa		12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	GYPC	P04921	128 aa		12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	SLC10A3	P09131	477 aa		12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	CASP14	P31944	242 aa		12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	CTCF	P49711	727 aa	Predicted RBP	12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	MARS	P56192	900 aa	Known RBP	12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	PPP2R3A	Q06190	1150 aa		12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	NOG	Q13253	232 aa		12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	GRM1	Q13255	1194 aa		12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	VWA3B	Q502W6	1294 aa		12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	ARSH	Q5FYA8	562 aa		12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	PRAMEF18	Q5VWM3	479 aa		12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	CYP26C1	Q6V0L0	522 aa		12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	CATSPERG	Q6ZRH7	1159 aa		12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	STXBP4	Q6ZWJ1	553 aa		12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	ZC3H3	Q8IXZ2	948 aa	Known RBP	12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	ZNF397	Q8NF99	534 aa	Predicted RBP	12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	CYP2W1	Q8TAV3	490 aa		12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	SYTL5	Q8TDW5	730 aa	Predicted RBP	12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	GJA10	Q969M2	543 aa		12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	TRERF1	Q96PN7	1200 aa		12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	RAVER2	Q9HCJ3	691 aa	Known RBP	12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	PPP2R2C	Q9Y2T4	447 aa		12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	LUC7L2	Q9Y383	392 aa	Known RBP	12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	ZHX2	Q9Y6X8	837 aa		12.01	□□□□□ -0.49
ITSN1-231	ENST00000489261	ATAD5	Q96QE3	1844 aa		12	□□□□□ -0.49
ITSN1-231	ENST00000489261	POTEF	A5A3E0	1075 aa		12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms