RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 GHRP10912 638 aa18.79■□□□□ 0.6
USP48-210ENST00000489108 ADAM17P78536 824 aa18.79■□□□□ 0.6
USP48-210ENST00000489108 ARHGAP4P98171 946 aa18.79■□□□□ 0.6
USP48-210ENST00000489108 PKN1Q16512 942 aa18.79■□□□□ 0.6
USP48-210ENST00000489108 ANKRD45Q5TZF3 282 aa18.79■□□□□ 0.6
USP48-210ENST00000489108 FCHSD1Q86WN1 690 aa18.79■□□□□ 0.6
USP48-210ENST00000489108 SUGP1Q8IWZ8 645 aaKnown RBP18.79■□□□□ 0.6
USP48-210ENST00000489108 ENAHQ8N8S7 591 aaPredicted RBP18.79■□□□□ 0.6
USP48-210ENST00000489108 ZNF689Q96CS4 500 aaPredicted RBP18.79■□□□□ 0.6
USP48-210ENST00000489108 EHMT1Q9H9B1 1298 aa18.79■□□□□ 0.6
USP48-210ENST00000489108 CLEC1BQ9P126 229 aa18.79■□□□□ 0.6
USP48-210ENST00000489108 TELO2Q9Y4R8 837 aa18.79■□□□□ 0.6
USP48-210ENST00000489108 PCDHA1Q9Y5I3 950 aa18.79■□□□□ 0.6
USP48-210ENST00000489108 DOCK5Q9H7D0 1870 aa18.79■□□□□ 0.6
USP48-210ENST00000489108 TTC3P53804 2025 aa18.78■□□□□ 0.6
USP48-210ENST00000489108 LOC730098B7Z3J9 87 aa18.78■□□□□ 0.6
USP48-210ENST00000489108 DNAJB1P25685 340 aa18.78■□□□□ 0.6
USP48-210ENST00000489108 PDE1AP54750 535 aa18.78■□□□□ 0.6
USP48-210ENST00000489108 RRP1P56182 461 aaKnown RBP18.78■□□□□ 0.6
USP48-210ENST00000489108 UTP14CQ5TAP6 766 aaKnown RBP18.78■□□□□ 0.6
USP48-210ENST00000489108 CYFIP1Q7L576 1253 aa18.78■□□□□ 0.6
USP48-210ENST00000489108 ADGRD2Q7Z7M1 963 aa18.78■□□□□ 0.6
USP48-210ENST00000489108 TRIM50Q86XT4 487 aa18.78■□□□□ 0.6
USP48-210ENST00000489108 FBXL6Q8N531 539 aa18.78■□□□□ 0.6
USP48-210ENST00000489108 SAMD3Q8N6K7 520 aa18.78■□□□□ 0.6
USP48-210ENST00000489108 LMBR1Q8WVP7 490 aa18.78■□□□□ 0.6
USP48-210ENST00000489108 GPR20Q99678 358 aa18.78■□□□□ 0.6
USP48-210ENST00000489108 PLVAPQ9BX97 442 aa18.78■□□□□ 0.6
USP48-210ENST00000489108 FAM86C1Q9NVL1 165 aa18.78■□□□□ 0.6
USP48-210ENST00000489108 ZSWIM5Q9P217 1185 aa18.78■□□□□ 0.6
USP48-210ENST00000489108 CFAP54Q96N23 3096 aa18.77■□□□□ 0.6
USP48-210ENST00000489108 DGKIO75912 1065 aa18.77■□□□□ 0.6
USP48-210ENST00000489108 SPPL3Q8TCT6 385 aa18.77■□□□□ 0.6
USP48-210ENST00000489108 MTMR8Q96EF0 704 aa18.77■□□□□ 0.6
USP48-210ENST00000489108 ZBTB47Q9UFB7 747 aaPredicted RBP18.77■□□□□ 0.6
USP48-210ENST00000489108 ZDBF2Q9HCK1 2354 aa18.77■□□□□ 0.6
USP48-210ENST00000489108 KMT2EQ8IZD2 1858 aa18.76■□□□□ 0.59
USP48-210ENST00000489108 KLRF2D3W0D1 207 aa18.76■□□□□ 0.59
USP48-210ENST00000489108 GCOM1H8Y6P7 765 aaPredicted RBP18.76■□□□□ 0.59
USP48-210ENST00000489108 ZBTB5O15062 677 aa18.76■□□□□ 0.59
USP48-210ENST00000489108 GFRA3O60609 400 aa18.76■□□□□ 0.59
USP48-210ENST00000489108 POLR2MP0CAP2 368 aa18.76■□□□□ 0.59
USP48-210ENST00000489108 MRPS9P82933 396 aaKnown RBP18.76■□□□□ 0.59
USP48-210ENST00000489108 NEDD9Q14511 834 aa18.76■□□□□ 0.59
USP48-210ENST00000489108 LPIN1Q14693 890 aa18.76■□□□□ 0.59
USP48-210ENST00000489108 CBX2Q14781 532 aaPredicted RBP18.76■□□□□ 0.59
USP48-210ENST00000489108 METTL7BQ6UX53 244 aa18.76■□□□□ 0.59
USP48-210ENST00000489108 RUFY4Q6ZNE9 571 aa18.76■□□□□ 0.59
USP48-210ENST00000489108 TICAM2Q86XR7 235 aa18.76■□□□□ 0.59
USP48-210ENST00000489108 EFHBQ8N7U6 833 aa18.76■□□□□ 0.59
USP48-210ENST00000489108 SMRP1Q8NCR6 262 aa18.76■□□□□ 0.59
USP48-210ENST00000489108 P2RX5Q93086 422 aa18.76■□□□□ 0.59
USP48-210ENST00000489108 RTEL1Q9NZ71 1219 aa18.76■□□□□ 0.59
USP48-210ENST00000489108 SPATA31C2B4DYI2 1134 aa18.75■□□□□ 0.59
USP48-210ENST00000489108 ITGB1P05556 798 aa18.75■□□□□ 0.59
USP48-210ENST00000489108 ICAM3P32942 547 aa18.75■□□□□ 0.59
USP48-210ENST00000489108 VCPP55072 806 aaKnown RBP18.75■□□□□ 0.59
USP48-210ENST00000489108 MGAT3Q09327 533 aa18.75■□□□□ 0.59
USP48-210ENST00000489108 COASYQ13057 564 aa18.75■□□□□ 0.59
USP48-210ENST00000489108 SEMA3FQ13275 785 aa18.75■□□□□ 0.59
USP48-210ENST00000489108 GNPTABQ3T906 1256 aa18.75■□□□□ 0.59
USP48-210ENST00000489108 RBM23Q86U06 439 aaKnown RBP18.75■□□□□ 0.59
USP48-210ENST00000489108 PPP2R3CQ969Q6 453 aa18.75■□□□□ 0.59
USP48-210ENST00000489108 ZNF215Q9UL58 517 aaPredicted RBP18.75■□□□□ 0.59
USP48-210ENST00000489108 MRPL42Q9Y6G3 142 aaKnown RBP18.75■□□□□ 0.59
USP48-210ENST00000489108 NRCAMQ92823 1304 aa18.74■□□□□ 0.59
USP48-210ENST00000489108 ZFHX2Q9C0A1 2572 aaPredicted RBP18.74■□□□□ 0.59
USP48-210ENST00000489108 BAZ2BQ9UIF8 2168 aaKnown RBP18.74■□□□□ 0.59
USP48-210ENST00000489108 NRIP1P48552 1158 aa18.74■□□□□ 0.59
USP48-210ENST00000489108 NT5C2P49902 561 aa18.74■□□□□ 0.59
USP48-210ENST00000489108 SP4Q02446 784 aa18.74■□□□□ 0.59
USP48-210ENST00000489108 HOMER1Q86YM7 354 aa18.74■□□□□ 0.59
USP48-210ENST00000489108 KLHL23Q8NBE8 558 aa18.74■□□□□ 0.59
USP48-210ENST00000489108 MAD2L2Q9UI95 211 aa18.74■□□□□ 0.59
USP48-210ENST00000489108 BARX2Q9UMQ3 279 aaPredicted RBP18.74■□□□□ 0.59
USP48-210ENST00000489108 USP15Q9Y4E8 981 aaPredicted RBP18.74■□□□□ 0.59
USP48-210ENST00000489108 KIAA1671Q9BY89 1806 aa18.73■□□□□ 0.59
USP48-210ENST00000489108 GLP2RO95838 553 aa18.73■□□□□ 0.59
USP48-210ENST00000489108 AVPR2P30518 371 aa18.73■□□□□ 0.59
USP48-210ENST00000489108 MFAP1P55081 439 aaKnown RBP18.73■□□□□ 0.59
USP48-210ENST00000489108 SIGLEC14Q08ET2 396 aa18.73■□□□□ 0.59
USP48-210ENST00000489108 NAALADL2Q58DX5 795 aa18.73■□□□□ 0.59
USP48-210ENST00000489108 FBXO47Q5MNV8 452 aa18.73■□□□□ 0.59
USP48-210ENST00000489108 RTN4RL1Q86UN2 441 aaPredicted RBP18.73■□□□□ 0.59
USP48-210ENST00000489108 POF1BQ8WVV4 589 aa18.73■□□□□ 0.59
USP48-210ENST00000489108 ATOH1Q92858 354 aaPredicted RBP18.73■□□□□ 0.59
USP48-210ENST00000489108 RILPL2Q969X0 211 aa18.73■□□□□ 0.59
USP48-210ENST00000489108 RPGRIP1Q96KN7 1286 aa18.73■□□□□ 0.59
USP48-210ENST00000489108 INPP4AQ96PE3 977 aaPredicted RBP18.73■□□□□ 0.59
USP48-210ENST00000489108 PHF7Q9BWX1 381 aaPredicted RBP18.73■□□□□ 0.59
USP48-210ENST00000489108 PCDHGC5Q9Y5F6 944 aa18.73■□□□□ 0.59
USP48-210ENST00000489108 SLC35G1Q2M3R5 365 aa18.72■□□□□ 0.59
USP48-210ENST00000489108 IFIT1BQ5T764 474 aaKnown RBP18.72■□□□□ 0.59
USP48-210ENST00000489108 TAF2Q6P1X5 1199 aa18.72■□□□□ 0.59
USP48-210ENST00000489108 DNAJB3Q8WWF6 145 aa18.72■□□□□ 0.59
USP48-210ENST00000489108 LINC01599Q8WXQ3 324 aa18.72■□□□□ 0.59
USP48-210ENST00000489108 ASIC4Q96FT7 647 aa18.72■□□□□ 0.59
USP48-210ENST00000489108 PIGSQ96S52 555 aa18.72■□□□□ 0.59
USP48-210ENST00000489108 AGO3Q9H9G7 860 aaKnown RBP18.72■□□□□ 0.59
USP48-210ENST00000489108 PALM3A6NDB9 673 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms