RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 NME2P22392 152 aa6.17□□□□□ -1.42
SF3A3-207ENST00000488934 CACNB3P54284 484 aa6.17□□□□□ -1.42
SF3A3-207ENST00000488934 KIF23Q02241 960 aaPredicted RBP6.17□□□□□ -1.42
SF3A3-207ENST00000488934 ID3Q02535 119 aa6.17□□□□□ -1.42
SF3A3-207ENST00000488934 PICALMQ13492 652 aa6.17□□□□□ -1.42
SF3A3-207ENST00000488934 LRRFIP1Q32MZ4 808 aaKnown RBP6.17□□□□□ -1.42
SF3A3-207ENST00000488934 ZSCAN25Q6NSZ9 544 aa6.17□□□□□ -1.42
SF3A3-207ENST00000488934 CDPF1Q6NVV7 123 aa6.17□□□□□ -1.42
SF3A3-207ENST00000488934 MOB2Q70IA6 237 aa6.17□□□□□ -1.42
SF3A3-207ENST00000488934 FBXL6Q8N531 539 aa6.17□□□□□ -1.42
SF3A3-207ENST00000488934 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.17□□□□□ -1.42
SF3A3-207ENST00000488934 KCNB2Q92953 911 aa6.17□□□□□ -1.42
SF3A3-207ENST00000488934 GCC1Q96CN9 775 aa6.17□□□□□ -1.42
SF3A3-207ENST00000488934 TBC1D32Q96NH3 1257 aa6.17□□□□□ -1.42
SF3A3-207ENST00000488934 WRNIP1Q96S55 665 aa6.17□□□□□ -1.42
SF3A3-207ENST00000488934 DHX36Q9H2U1 1008 aaKnown RBP6.17□□□□□ -1.42
SF3A3-207ENST00000488934 DCTPP1Q9H773 170 aa6.17□□□□□ -1.42
SF3A3-207ENST00000488934 ATAD5Q96QE3 1844 aa6.17□□□□□ -1.42
SF3A3-207ENST00000488934 ATRNL1Q5VV63 1379 aa6.17□□□□□ -1.42
SF3A3-207ENST00000488934 NAV1Q8NEY1 1877 aa6.16□□□□□ -1.42
SF3A3-207ENST00000488934 ERC2O15083 957 aa6.16□□□□□ -1.42
SF3A3-207ENST00000488934 USP2O75604 605 aaPredicted RBP6.16□□□□□ -1.42
SF3A3-207ENST00000488934 ECEL1O95672 775 aa6.16□□□□□ -1.42
SF3A3-207ENST00000488934 HLA-DOAP06340 250 aa6.16□□□□□ -1.42
SF3A3-207ENST00000488934 P4HBP07237 508 aaKnown RBP6.16□□□□□ -1.42
SF3A3-207ENST00000488934 LIG1P18858 919 aa6.16□□□□□ -1.42
SF3A3-207ENST00000488934 ATP5JP18859 108 aa6.16□□□□□ -1.42
SF3A3-207ENST00000488934 ARNTP27540 789 aa6.16□□□□□ -1.42
SF3A3-207ENST00000488934 TM4SF4P48230 202 aa6.16□□□□□ -1.42
SF3A3-207ENST00000488934 RGS3P49796 1198 aa6.16□□□□□ -1.42
SF3A3-207ENST00000488934 TCP10Q12799 353 aa6.16□□□□□ -1.42
SF3A3-207ENST00000488934 HDAC1Q13547 482 aaPredicted RBP6.16□□□□□ -1.42
SF3A3-207ENST00000488934 VGLL4Q14135 290 aa6.16□□□□□ -1.42
SF3A3-207ENST00000488934 LRRC14Q15048 493 aa6.16□□□□□ -1.42
SF3A3-207ENST00000488934 ERO1BQ86YB8 467 aa6.16□□□□□ -1.42
SF3A3-207ENST00000488934 TEX11Q8IYF3 940 aa6.16□□□□□ -1.42
SF3A3-207ENST00000488934 OPTNQ96CV9 577 aa6.16□□□□□ -1.42
SF3A3-207ENST00000488934 WNK4Q96J92 1243 aa6.16□□□□□ -1.42
SF3A3-207ENST00000488934 GSX1Q9H4S2 264 aaPredicted RBP6.16□□□□□ -1.42
SF3A3-207ENST00000488934 CCDC86Q9H6F5 360 aaKnown RBP6.16□□□□□ -1.42
SF3A3-207ENST00000488934 C12orf49Q9H741 205 aa6.16□□□□□ -1.42
SF3A3-207ENST00000488934 CBX8Q9HC52 389 aa6.16□□□□□ -1.42
SF3A3-207ENST00000488934 MYH8P13535 1937 aa6.16□□□□□ -1.42
SF3A3-207ENST00000488934 AOX1Q06278 1338 aa6.16□□□□□ -1.42
SF3A3-207ENST00000488934 TTC41PQ6P2S7 1318 aa6.16□□□□□ -1.42
SF3A3-207ENST00000488934 KIAA1324LA8MWY0 1029 aaPredicted RBP6.15□□□□□ -1.42
SF3A3-207ENST00000488934 TMPRSS2O15393 492 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 PRPF40AO75400 957 aaKnown RBP6.15□□□□□ -1.42
SF3A3-207ENST00000488934 NFICP08651 508 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 HSPA8P11142 646 aaKnown RBP6.15□□□□□ -1.42
SF3A3-207ENST00000488934 CYP7A1P22680 504 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 GTF2A2P52657 109 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 LBX1P52954 281 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 RHBDL3P58872 404 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 PPATQ06203 517 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 SNAPC2Q13487 334 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 NOL9Q5SY16 702 aaKnown RBP6.15□□□□□ -1.42
SF3A3-207ENST00000488934 SLC9C2Q5TAH2 1124 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 SCARA3Q6AZY7 606 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 ZAR1Q86SH2 424 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 AMOTL1Q8IY63 956 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 MAGEB6Q8N7X4 407 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 C3orf58Q8NDZ4 430 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 CRBNQ96SW2 442 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 DNAJC2Q99543 621 aaKnown RBP6.15□□□□□ -1.42
SF3A3-207ENST00000488934 HAUS7Q99871 368 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 OSBPL5Q9H0X9 879 aaPredicted RBP6.15□□□□□ -1.42
SF3A3-207ENST00000488934 SEMA6CQ9H3T2 930 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 RWDD1Q9H446 243 aaPredicted RBP6.15□□□□□ -1.42
SF3A3-207ENST00000488934 ACSS3Q9H6R3 686 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 ZCCHC17Q9NP64 241 aaKnown RBP6.15□□□□□ -1.42
SF3A3-207ENST00000488934 PICK1Q9NRD5 415 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 ECHDC1Q9NTX5 307 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 FAM105AQ9NUU6 356 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 PAG1Q9NWQ8 432 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 AATFQ9NY61 560 aaKnown RBP eCLIP6.15□□□□□ -1.42
SF3A3-207ENST00000488934 CRIM1Q9NZV1 1036 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 PI4KBQ9UBF8 816 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 PRKAG2Q9UGJ0 569 aa6.15□□□□□ -1.42
SF3A3-207ENST00000488934 HERC5Q9UII4 1024 aaKnown RBP6.15□□□□□ -1.42
SF3A3-207ENST00000488934 PTPRFP10586 1907 aa6.15□□□□□ -1.43
SF3A3-207ENST00000488934 CASP8AP2Q9UKL3 1982 aa6.15□□□□□ -1.43
SF3A3-207ENST00000488934 DDX60LQ5H9U9 1706 aaKnown RBP6.14□□□□□ -1.43
SF3A3-207ENST00000488934 PRR19A6NJB7 356 aa6.14□□□□□ -1.43
SF3A3-207ENST00000488934 GOLIM4O00461 696 aa6.14□□□□□ -1.43
SF3A3-207ENST00000488934 CTNND1O60716 968 aaKnown RBP6.14□□□□□ -1.43
SF3A3-207ENST00000488934 GLRX3O76003 335 aaKnown RBP6.14□□□□□ -1.43
SF3A3-207ENST00000488934 F13BP05160 661 aa6.14□□□□□ -1.43
SF3A3-207ENST00000488934 ZFYP08048 801 aaPredicted RBP6.14□□□□□ -1.43
SF3A3-207ENST00000488934 CETPP11597 493 aa6.14□□□□□ -1.43
SF3A3-207ENST00000488934 EIF4BP23588 611 aaKnown RBP6.14□□□□□ -1.43
SF3A3-207ENST00000488934 GNA15P30679 374 aa6.14□□□□□ -1.43
SF3A3-207ENST00000488934 PPIL2Q13356 520 aa6.14□□□□□ -1.43
SF3A3-207ENST00000488934 TTC6Q86TZ1 520 aa6.14□□□□□ -1.43
SF3A3-207ENST00000488934 SCYL3Q8IZE3 742 aa6.14□□□□□ -1.43
SF3A3-207ENST00000488934 CRACR2BQ8N4Y2 399 aaPredicted RBP6.14□□□□□ -1.43
SF3A3-207ENST00000488934 SH3RF3Q8TEJ3 882 aaPredicted RBP6.14□□□□□ -1.43
SF3A3-207ENST00000488934 ZNF384Q8TF68 577 aa6.14□□□□□ -1.43
SF3A3-207ENST00000488934 CLMNQ96JQ2 1002 aa6.14□□□□□ -1.43
SF3A3-207ENST00000488934 NECAB3Q96P71 396 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms