RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 RNPEPQ9H4A4 650 aa15.77■□□□□ 0.12
SPTLC1-207ENST00000488921 ZSWIM6Q9HCJ5 1215 aa15.77■□□□□ 0.12
SPTLC1-207ENST00000488921 C6orf50Q9HD87 102 aa15.77■□□□□ 0.12
SPTLC1-207ENST00000488921 RNF216Q9NWF9 866 aaPredicted RBP15.77■□□□□ 0.12
SPTLC1-207ENST00000488921 EYSQ5T1H1 3165 aa15.77■□□□□ 0.11
SPTLC1-207ENST00000488921 NFASCO94856 1347 aa15.76■□□□□ 0.11
SPTLC1-207ENST00000488921 ATP9AO75110 1047 aa15.76■□□□□ 0.11
SPTLC1-207ENST00000488921 GNA11P29992 359 aa15.76■□□□□ 0.11
SPTLC1-207ENST00000488921 ZNF76P36508 570 aa15.76■□□□□ 0.11
SPTLC1-207ENST00000488921 THPOP40225 353 aa15.76■□□□□ 0.11
SPTLC1-207ENST00000488921 EVCP57679 992 aa15.76■□□□□ 0.11
SPTLC1-207ENST00000488921 ZNF200P98182 395 aaPredicted RBP15.76■□□□□ 0.11
SPTLC1-207ENST00000488921 CEP55Q53EZ4 464 aa15.76■□□□□ 0.11
SPTLC1-207ENST00000488921 ZNF618Q5T7W0 954 aa15.76■□□□□ 0.11
SPTLC1-207ENST00000488921 PPP2R2DQ66LE6 453 aa15.76■□□□□ 0.11
SPTLC1-207ENST00000488921 REXO1Q8N1G1 1221 aaKnown RBP15.76■□□□□ 0.11
SPTLC1-207ENST00000488921 BICD2Q8TD16 824 aa15.76■□□□□ 0.11
SPTLC1-207ENST00000488921 PGBD1Q96JS3 809 aa15.76■□□□□ 0.11
SPTLC1-207ENST00000488921 SDF4Q9BRK5 362 aa15.76■□□□□ 0.11
SPTLC1-207ENST00000488921 ZMYND12Q9H0C1 365 aa15.76■□□□□ 0.11
SPTLC1-207ENST00000488921 JPH1Q9HDC5 661 aaPredicted RBP15.76■□□□□ 0.11
SPTLC1-207ENST00000488921 KCNH7Q9NS40 1196 aa15.76■□□□□ 0.11
SPTLC1-207ENST00000488921 ERAP1Q9NZ08 941 aa15.76■□□□□ 0.11
SPTLC1-207ENST00000488921 PKD2L1Q9P0L9 805 aa15.76■□□□□ 0.11
SPTLC1-207ENST00000488921 SLC9A2Q9UBY0 812 aa15.76■□□□□ 0.11
SPTLC1-207ENST00000488921 YBX2Q9Y2T7 364 aaKnown RBP15.76■□□□□ 0.11
SPTLC1-207ENST00000488921 NRCAMQ92823 1304 aa15.75■□□□□ 0.11
SPTLC1-207ENST00000488921 KIF28PB7ZC32 967 aa15.75■□□□□ 0.11
SPTLC1-207ENST00000488921 EIF5BO60841 1220 aaKnown RBP15.75■□□□□ 0.11
SPTLC1-207ENST00000488921 IFNAR1P17181 557 aa15.75■□□□□ 0.11
SPTLC1-207ENST00000488921 PDIA3P30101 505 aaKnown RBP15.75■□□□□ 0.11
SPTLC1-207ENST00000488921 HIC1Q14526 733 aa15.75■□□□□ 0.11
SPTLC1-207ENST00000488921 NIPA1Q7RTP0 329 aa15.75■□□□□ 0.11
SPTLC1-207ENST00000488921 GLG1Q92896 1179 aa15.75■□□□□ 0.11
SPTLC1-207ENST00000488921 TNPO1Q92973 898 aaKnown RBP15.75■□□□□ 0.11
SPTLC1-207ENST00000488921 WNT8BQ93098 351 aa15.75■□□□□ 0.11
SPTLC1-207ENST00000488921 SMARCAD1Q9H4L7 1026 aa15.75■□□□□ 0.11
SPTLC1-207ENST00000488921 SIP14410 1827 aa15.74■□□□□ 0.11
SPTLC1-207ENST00000488921 ABHD14A-ACY1A0A1B0GW23 586 aa15.74■□□□□ 0.11
SPTLC1-207ENST00000488921 GSTTP1A0A1W2PQM5 241 aa15.74■□□□□ 0.11
SPTLC1-207ENST00000488921 RSPH10B2B2RC85 870 aa15.74■□□□□ 0.11
SPTLC1-207ENST00000488921 TREHO43280 583 aa15.74■□□□□ 0.11
SPTLC1-207ENST00000488921 NBNO60934 754 aa15.74■□□□□ 0.11
SPTLC1-207ENST00000488921 RSPH10BP0C881 870 aa15.74■□□□□ 0.11
SPTLC1-207ENST00000488921 RABGGTBP53611 331 aa15.74■□□□□ 0.11
SPTLC1-207ENST00000488921 WDR5P61964 334 aaKnown RBP15.74■□□□□ 0.11
SPTLC1-207ENST00000488921 ARHGAP4P98171 946 aa15.74■□□□□ 0.11
SPTLC1-207ENST00000488921 IKBKEQ14164 716 aa15.74■□□□□ 0.11
SPTLC1-207ENST00000488921 NTRK3Q16288 839 aa15.74■□□□□ 0.11
SPTLC1-207ENST00000488921 HERC6Q8IVU3 1022 aa15.74■□□□□ 0.11
SPTLC1-207ENST00000488921 TRIM22Q8IYM9 498 aa15.74■□□□□ 0.11
SPTLC1-207ENST00000488921 LMBR1Q8WVP7 490 aa15.74■□□□□ 0.11
SPTLC1-207ENST00000488921 PHKBQ93100 1093 aa15.74■□□□□ 0.11
SPTLC1-207ENST00000488921 SLC26A6Q9BXS9 759 aa15.74■□□□□ 0.11
SPTLC1-207ENST00000488921 AZI2Q9H6S1 392 aa15.74■□□□□ 0.11
SPTLC1-207ENST00000488921 SETD4Q9NVD3 440 aa15.74■□□□□ 0.11
SPTLC1-207ENST00000488921 TMEM260Q9NX78 707 aa15.74■□□□□ 0.11
SPTLC1-207ENST00000488921 MYH9P35579 1960 aaKnown RBP15.73■□□□□ 0.11
SPTLC1-207ENST00000488921 UNC80Q8N2C7 3258 aa15.73■□□□□ 0.11
SPTLC1-207ENST00000488921 CPLX1O14810 134 aa15.73■□□□□ 0.11
SPTLC1-207ENST00000488921 LGR5O75473 907 aa15.73■□□□□ 0.11
SPTLC1-207ENST00000488921 RPLP2P05387 115 aaKnown RBP15.73■□□□□ 0.11
SPTLC1-207ENST00000488921 CCT2P78371 535 aaKnown RBP15.73■□□□□ 0.11
SPTLC1-207ENST00000488921 SETQ01105 290 aaPredicted RBP15.73■□□□□ 0.11
SPTLC1-207ENST00000488921 PPFIA1Q13136 1202 aa15.73■□□□□ 0.11
SPTLC1-207ENST00000488921 TOB2Q14106 344 aaPredicted RBP15.73■□□□□ 0.11
SPTLC1-207ENST00000488921 GPNMBQ14956 572 aa15.73■□□□□ 0.11
SPTLC1-207ENST00000488921 PKN1Q16512 942 aa15.73■□□□□ 0.11
SPTLC1-207ENST00000488921 JAKMIP3Q5VZ66 844 aa15.73■□□□□ 0.11
SPTLC1-207ENST00000488921 TAF2Q6P1X5 1199 aa15.73■□□□□ 0.11
SPTLC1-207ENST00000488921 CPLX2Q6PUV4 134 aaKnown RBP15.73■□□□□ 0.11
SPTLC1-207ENST00000488921 TRAF7Q6Q0C0 670 aa15.73■□□□□ 0.11
SPTLC1-207ENST00000488921 ZNF274Q96GC6 653 aaPredicted RBP15.73■□□□□ 0.11
SPTLC1-207ENST00000488921 AGO4Q9HCK5 861 aaKnown RBP15.73■□□□□ 0.11
SPTLC1-207ENST00000488921 TELO2Q9Y4R8 837 aa15.73■□□□□ 0.11
SPTLC1-207ENST00000488921 MYO9BQ13459 2157 aa15.72■□□□□ 0.11
SPTLC1-207ENST00000488921 MEIS1O00470 390 aa15.72■□□□□ 0.11
SPTLC1-207ENST00000488921 CA3P07451 260 aa15.72■□□□□ 0.11
SPTLC1-207ENST00000488921 CYP3A4P08684 503 aa15.72■□□□□ 0.11
SPTLC1-207ENST00000488921 ADAM17P78536 824 aa15.72■□□□□ 0.11
SPTLC1-207ENST00000488921 RSPH3Q86UC2 560 aa15.72■□□□□ 0.11
SPTLC1-207ENST00000488921 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.72■□□□□ 0.11
SPTLC1-207ENST00000488921 CYP2W1Q8TAV3 490 aa15.72■□□□□ 0.11
SPTLC1-207ENST00000488921 UPF3BQ9BZI7 483 aaKnown RBP15.72■□□□□ 0.11
SPTLC1-207ENST00000488921 PRDM12Q9H4Q4 367 aa15.72■□□□□ 0.11
SPTLC1-207ENST00000488921 NCOA5Q9HCD5 579 aaKnown RBP15.72■□□□□ 0.11
SPTLC1-207ENST00000488921 SH3GLB2Q9NR46 395 aa15.72■□□□□ 0.11
SPTLC1-207ENST00000488921 TUBE1Q9UJT0 475 aa15.72■□□□□ 0.11
SPTLC1-207ENST00000488921 WDR81Q562E7 1941 aa15.72■□□□□ 0.11
SPTLC1-207ENST00000488921 CHD9Q3L8U1 2897 aa15.72■□□□□ 0.11
SPTLC1-207ENST00000488921 COL4A4P53420 1690 aaPredicted RBP15.71■□□□□ 0.11
SPTLC1-207ENST00000488921 TLL1O43897 1013 aa15.71■□□□□ 0.11
SPTLC1-207ENST00000488921 CTSHP09668 335 aa15.71■□□□□ 0.11
SPTLC1-207ENST00000488921 ARP10275 920 aa15.71■□□□□ 0.11
SPTLC1-207ENST00000488921 MYOGP15173 224 aa15.71■□□□□ 0.11
SPTLC1-207ENST00000488921 MARK3P27448 753 aa15.71■□□□□ 0.11
SPTLC1-207ENST00000488921 SLC26A2P50443 739 aa15.71■□□□□ 0.11
SPTLC1-207ENST00000488921 ANAPC15P60006 121 aa15.71■□□□□ 0.11
SPTLC1-207ENST00000488921 ACTR2P61160 394 aa15.71■□□□□ 0.11
SPTLC1-207ENST00000488921 SSRP1Q08945 709 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms