RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 SPATA9Q9BWV2 254 aa6.89□□□□□ -1.31
CTNNB1-215ENST00000488914 CD244Q9BZW8 370 aa6.89□□□□□ -1.31
CTNNB1-215ENST00000488914 MYRFQ9Y2G1 1151 aa6.89□□□□□ -1.31
CTNNB1-215ENST00000488914 MSRB2Q9Y3D2 182 aa6.89□□□□□ -1.31
CTNNB1-215ENST00000488914 ACOT7O00154 380 aa6.88□□□□□ -1.31
CTNNB1-215ENST00000488914 GPR42O15529 346 aa6.88□□□□□ -1.31
CTNNB1-215ENST00000488914 ADCY3O60266 1144 aa6.88□□□□□ -1.31
CTNNB1-215ENST00000488914 B4GALT4O60513 344 aa6.88□□□□□ -1.31
CTNNB1-215ENST00000488914 KLHL18O94889 574 aa6.88□□□□□ -1.31
CTNNB1-215ENST00000488914 PFKPQ01813 784 aa6.88□□□□□ -1.31
CTNNB1-215ENST00000488914 NFATC3Q12968 1075 aa6.88□□□□□ -1.31
CTNNB1-215ENST00000488914 ICAM4Q14773 271 aa6.88□□□□□ -1.31
CTNNB1-215ENST00000488914 SKIDA1Q1XH10 827 aa6.88□□□□□ -1.31
CTNNB1-215ENST00000488914 CPZQ66K79 652 aa6.88□□□□□ -1.31
CTNNB1-215ENST00000488914 GLB1LQ6UWU2 654 aa6.88□□□□□ -1.31
CTNNB1-215ENST00000488914 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.88□□□□□ -1.31
CTNNB1-215ENST00000488914 ZFYVE21Q9BQ24 234 aa6.88□□□□□ -1.31
CTNNB1-215ENST00000488914 TRIM55Q9BYV6 548 aa6.88□□□□□ -1.31
CTNNB1-215ENST00000488914 FTSJ1Q9UET6 329 aa6.88□□□□□ -1.31
CTNNB1-215ENST00000488914 PFDN2Q9UHV9 154 aa6.88□□□□□ -1.31
CTNNB1-215ENST00000488914 DSEQ9UL01 958 aa6.88□□□□□ -1.31
CTNNB1-215ENST00000488914 IL18BPO95998 194 aa6.87□□□□□ -1.31
CTNNB1-215ENST00000488914 SPIRE1Q08AE8 756 aa6.87□□□□□ -1.31
CTNNB1-215ENST00000488914 NAALADL2Q58DX5 795 aa6.87□□□□□ -1.31
CTNNB1-215ENST00000488914 FAM209AQ5JX71 171 aa6.87□□□□□ -1.31
CTNNB1-215ENST00000488914 CD276Q5ZPR3 534 aa6.87□□□□□ -1.31
CTNNB1-215ENST00000488914 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.87□□□□□ -1.31
CTNNB1-215ENST00000488914 LRRC47Q8N1G4 583 aaKnown RBP6.87□□□□□ -1.31
CTNNB1-215ENST00000488914 KLHL36Q8N4N3 616 aa6.87□□□□□ -1.31
CTNNB1-215ENST00000488914 STPG3Q8N7X2 389 aa6.87□□□□□ -1.31
CTNNB1-215ENST00000488914 BORCS6Q96GS4 357 aa6.87□□□□□ -1.31
CTNNB1-215ENST00000488914 DLL4Q9NR61 685 aa6.87□□□□□ -1.31
CTNNB1-215ENST00000488914 ZFP69BQ9UJL9 534 aa6.87□□□□□ -1.31
CTNNB1-215ENST00000488914 CCDC85CA6NKD9 419 aa6.86□□□□□ -1.31
CTNNB1-215ENST00000488914 MATN3O15232 486 aa6.86□□□□□ -1.31
CTNNB1-215ENST00000488914 DIAPH1O60610 1272 aaKnown RBP6.86□□□□□ -1.31
CTNNB1-215ENST00000488914 CYP7B1O75881 506 aa6.86□□□□□ -1.31
CTNNB1-215ENST00000488914 STK10O94804 968 aaKnown RBP6.86□□□□□ -1.31
CTNNB1-215ENST00000488914 KNG1P01042 644 aa6.86□□□□□ -1.31
CTNNB1-215ENST00000488914 TNFRSF1AP19438 455 aa6.86□□□□□ -1.31
CTNNB1-215ENST00000488914 PPP2CBP62714 309 aa6.86□□□□□ -1.31
CTNNB1-215ENST00000488914 PPP2CAP67775 309 aa6.86□□□□□ -1.31
CTNNB1-215ENST00000488914 TTC9BQ8N6N2 239 aa6.86□□□□□ -1.31
CTNNB1-215ENST00000488914 WRNIP1Q96S55 665 aa6.86□□□□□ -1.31
CTNNB1-215ENST00000488914 C1QTNF3Q9BXJ4 246 aa6.86□□□□□ -1.31
CTNNB1-215ENST00000488914 PDGFDQ9GZP0 370 aaPredicted RBP6.86□□□□□ -1.31
CTNNB1-215ENST00000488914 TMPRSS5Q9H3S3 457 aa6.86□□□□□ -1.31
CTNNB1-215ENST00000488914 NPEPPSL1A6NEC2 478 aa6.85□□□□□ -1.31
CTNNB1-215ENST00000488914 FAM47E-STBD1D6RA91 191 aa6.85□□□□□ -1.31
CTNNB1-215ENST00000488914 E9PSI1 815 aa6.85□□□□□ -1.31
CTNNB1-215ENST00000488914 PDPK1O15530 556 aa6.85□□□□□ -1.31
CTNNB1-215ENST00000488914 C6orf222P0C671 652 aaPredicted RBP6.85□□□□□ -1.31
CTNNB1-215ENST00000488914 EPHA5P54756 1037 aa6.85□□□□□ -1.31
CTNNB1-215ENST00000488914 CDSNQ15517 529 aa6.85□□□□□ -1.31
CTNNB1-215ENST00000488914 KCTD1Q719H9 257 aa6.85□□□□□ -1.31
CTNNB1-215ENST00000488914 CHST13Q8NET6 341 aa6.85□□□□□ -1.31
CTNNB1-215ENST00000488914 KCND1Q9NSA2 647 aa6.85□□□□□ -1.31
CTNNB1-215ENST00000488914 ADAM29Q9UKF5 820 aa6.85□□□□□ -1.31
CTNNB1-215ENST00000488914 PCDHA8Q9Y5H6 950 aa6.85□□□□□ -1.31
CTNNB1-215ENST00000488914 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.84□□□□□ -1.31
CTNNB1-215ENST00000488914 ZNF839A8K0R7 811 aa6.84□□□□□ -1.31
CTNNB1-215ENST00000488914 EPHB4P54760 987 aa6.84□□□□□ -1.31
CTNNB1-215ENST00000488914 SURF1Q15526 300 aa6.84□□□□□ -1.31
CTNNB1-215ENST00000488914 SMAD2Q15796 467 aaKnown RBP6.84□□□□□ -1.31
CTNNB1-215ENST00000488914 ARHGEF18Q6ZSZ5 1173 aa6.84□□□□□ -1.31
CTNNB1-215ENST00000488914 Q6ZUG5 572 aa6.84□□□□□ -1.31
CTNNB1-215ENST00000488914 GPR155Q7Z3F1 870 aa6.84□□□□□ -1.31
CTNNB1-215ENST00000488914 PLEKHH3Q7Z736 793 aa6.84□□□□□ -1.31
CTNNB1-215ENST00000488914 CKAP2LQ8IYA6 745 aa6.84□□□□□ -1.31
CTNNB1-215ENST00000488914 WWC2-AS2Q96NR7 200 aa6.84□□□□□ -1.31
CTNNB1-215ENST00000488914 TACO1Q9BSH4 297 aaKnown RBP6.84□□□□□ -1.31
CTNNB1-215ENST00000488914 MEGF9Q9H1U4 602 aa6.84□□□□□ -1.31
CTNNB1-215ENST00000488914 BARX1Q9HBU1 254 aaPredicted RBP6.84□□□□□ -1.31
CTNNB1-215ENST00000488914 CD248Q9HCU0 757 aa6.84□□□□□ -1.31
CTNNB1-215ENST00000488914 SLC39A2Q9NP94 309 aa6.84□□□□□ -1.31
CTNNB1-215ENST00000488914 JADE2Q9NQC1 790 aa6.84□□□□□ -1.31
CTNNB1-215ENST00000488914 ARHGAP20Q9P2F6 1191 aa6.84□□□□□ -1.31
CTNNB1-215ENST00000488914 PTPN22Q9Y2R2 807 aa6.84□□□□□ -1.31
CTNNB1-215ENST00000488914 FAM90A27PA6NNH2 459 aa6.83□□□□□ -1.32
CTNNB1-215ENST00000488914 ENO2P09104 434 aaPredicted RBP6.83□□□□□ -1.32
CTNNB1-215ENST00000488914 FAM153BP0C7A2 387 aa6.83□□□□□ -1.32
CTNNB1-215ENST00000488914 SSRP1Q08945 709 aaKnown RBP6.83□□□□□ -1.32
CTNNB1-215ENST00000488914 MTERF2Q49AM1 385 aa6.83□□□□□ -1.32
CTNNB1-215ENST00000488914 SPRED1Q7Z699 444 aa6.83□□□□□ -1.32
CTNNB1-215ENST00000488914 DNERQ8NFT8 737 aa6.83□□□□□ -1.32
CTNNB1-215ENST00000488914 PCDH19Q8TAB3 1148 aa6.83□□□□□ -1.32
CTNNB1-215ENST00000488914 DVL3Q92997 716 aaPredicted RBP6.83□□□□□ -1.32
CTNNB1-215ENST00000488914 ZNF669Q96BR6 464 aaPredicted RBP6.83□□□□□ -1.32
CTNNB1-215ENST00000488914 EXOC2Q96KP1 924 aa6.83□□□□□ -1.32
CTNNB1-215ENST00000488914 ALG1Q9BT22 464 aa6.83□□□□□ -1.32
CTNNB1-215ENST00000488914 USP35Q9P2H5 1018 aa6.83□□□□□ -1.32
CTNNB1-215ENST00000488914 TRBV23-1A0A0A0MS06 115 aa6.82□□□□□ -1.32
CTNNB1-215ENST00000488914 C1QTNF3-AMACRE9PGA6 284 aa6.82□□□□□ -1.32
CTNNB1-215ENST00000488914 FBXO21O94952 628 aa6.82□□□□□ -1.32
CTNNB1-215ENST00000488914 CNOT4O95628 575 aaKnown RBP6.82□□□□□ -1.32
CTNNB1-215ENST00000488914 AMY2AP04746 511 aa6.82□□□□□ -1.32
CTNNB1-215ENST00000488914 AMY2BP19961 511 aa6.82□□□□□ -1.32
CTNNB1-215ENST00000488914 ZC3H6P61129 1189 aaKnown RBP6.82□□□□□ -1.32
CTNNB1-215ENST00000488914 RASGRF1Q13972 1273 aa6.82□□□□□ -1.32
CTNNB1-215ENST00000488914 ARHGAP36Q6ZRI8 547 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms