RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 GNPTABQ3T906 1256 aa12.22□□□□□ -0.45
COL21A1-211ENST00000488912 DYDC2Q96IM9 177 aa12.22□□□□□ -0.45
COL21A1-211ENST00000488912 ZIC5Q96T25 663 aa12.22□□□□□ -0.45
COL21A1-211ENST00000488912 ZCCHC17Q9NP64 241 aaKnown RBP12.22□□□□□ -0.45
COL21A1-211ENST00000488912 CPA4Q9UI42 421 aa12.22□□□□□ -0.45
COL21A1-211ENST00000488912 SLITRK3O94933 977 aa12.21□□□□□ -0.45
COL21A1-211ENST00000488912 KCNA2P16389 499 aa12.21□□□□□ -0.45
COL21A1-211ENST00000488912 PSMC6P62333 389 aa12.21□□□□□ -0.45
COL21A1-211ENST00000488912 PDE4DQ08499 809 aa12.21□□□□□ -0.45
COL21A1-211ENST00000488912 IQCB1Q15051 598 aa12.21□□□□□ -0.45
COL21A1-211ENST00000488912 HHIPL1Q96JK4 782 aa12.21□□□□□ -0.45
COL21A1-211ENST00000488912 CDHR1Q96JP9 859 aa12.21□□□□□ -0.45
COL21A1-211ENST00000488912 C7orf25Q9BPX7 421 aa12.21□□□□□ -0.45
COL21A1-211ENST00000488912 NAT10Q9H0A0 1025 aaKnown RBP12.21□□□□□ -0.45
COL21A1-211ENST00000488912 MYMKA6NI61 221 aa12.21□□□□□ -0.46
COL21A1-211ENST00000488912 SPATA31C2B4DYI2 1134 aa12.21□□□□□ -0.46
COL21A1-211ENST00000488912 KLRC4O43908 158 aa12.21□□□□□ -0.46
COL21A1-211ENST00000488912 CCNE2O96020 404 aa12.21□□□□□ -0.46
COL21A1-211ENST00000488912 ADORA2AP29274 412 aa12.21□□□□□ -0.46
COL21A1-211ENST00000488912 AMPD3Q01432 767 aa12.21□□□□□ -0.46
COL21A1-211ENST00000488912 EPHA7Q15375 998 aa12.21□□□□□ -0.46
COL21A1-211ENST00000488912 SEPT14Q6ZU15 432 aa12.21□□□□□ -0.46
COL21A1-211ENST00000488912 PAXIP1Q6ZW49 1069 aaPredicted RBP12.21□□□□□ -0.46
COL21A1-211ENST00000488912 MIER3Q7Z3K6 550 aa12.21□□□□□ -0.46
COL21A1-211ENST00000488912 TPH2Q8IWU9 490 aa12.21□□□□□ -0.46
COL21A1-211ENST00000488912 DHX40Q8IX18 779 aaKnown RBP12.21□□□□□ -0.46
COL21A1-211ENST00000488912 BCAS3Q9H6U6 928 aa12.21□□□□□ -0.46
COL21A1-211ENST00000488912 TUFT1Q9NNX1 390 aa12.21□□□□□ -0.46
COL21A1-211ENST00000488912 WRAP73Q9P2S5 460 aaPredicted RBP12.21□□□□□ -0.46
COL21A1-211ENST00000488912 SSBP05455 408 aaKnown RBP eCLIP12.2□□□□□ -0.46
COL21A1-211ENST00000488912 PLA2G4BP0C869 781 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 INHBEP58166 350 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 ASIC1P78348 528 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 SREBF2Q12772 1141 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 CYP4F22Q6NT55 531 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 EEPD1Q7L9B9 569 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 GPR142Q7Z601 462 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 SMYD4Q8IYR2 804 aaPredicted RBP12.2□□□□□ -0.46
COL21A1-211ENST00000488912 AOPEPQ8N6M6 819 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 BANK1Q8NDB2 785 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 LXNQ9BS40 222 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 SAMM50Q9Y512 469 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 IVNS1ABPQ9Y6Y0 642 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 COBLO75128 1261 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 ICAM3P32942 547 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 SLC12A3P55017 1021 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 KRT76Q01546 638 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 SP2Q02086 613 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 KMT5BQ4FZB7 885 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 DYMQ7RTS9 669 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 ABRAQ8N0Z2 381 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 DDX12PQ92771 950 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 BPIFA3Q9BQP9 254 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 RMND1Q9NWS8 449 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 DNM3Q9UQ16 869 aa12.2□□□□□ -0.46
COL21A1-211ENST00000488912 ZNF236Q9UL36 1845 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 MYH9P35579 1960 aaKnown RBP12.19□□□□□ -0.46
COL21A1-211ENST00000488912 B4DLN1 442 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 STRNO43815 780 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 SORBS3O60504 671 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 KCNB1Q14721 858 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 UVSSAQ2YD98 709 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 MLKLQ8NB16 471 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 ZNF784Q8NCA9 323 aaPredicted RBP12.19□□□□□ -0.46
COL21A1-211ENST00000488912 PIGOQ8TEQ8 1089 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 MPHOSPH6Q99547 160 aaKnown RBP12.19□□□□□ -0.46
COL21A1-211ENST00000488912 JPH1Q9HDC5 661 aaPredicted RBP12.19□□□□□ -0.46
COL21A1-211ENST00000488912 TCEAL9Q9UHQ7 104 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 TELO2Q9Y4R8 837 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 NFASCO94856 1347 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 WDR64B1ANS9 1081 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 ZBTB39O15060 712 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 TLR2O60603 784 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 ECM2O94769 699 aaPredicted RBP12.19□□□□□ -0.46
COL21A1-211ENST00000488912 CD44P16070 742 aaKnown RBP12.19□□□□□ -0.46
COL21A1-211ENST00000488912 MAPK4P31152 587 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 GRB14Q14449 540 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 ZNF792Q3KQV3 632 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 ZNF746Q6NUN9 644 aaPredicted RBP12.19□□□□□ -0.46
COL21A1-211ENST00000488912 GPBP1Q86WP2 473 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 NEK9Q8TD19 979 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 LRRC27Q9C0I9 530 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 BHMT2Q9H2M3 363 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 GDAQ9Y2T3 454 aa12.19□□□□□ -0.46
COL21A1-211ENST00000488912 PCNTO95613 3336 aa12.18□□□□□ -0.46
COL21A1-211ENST00000488912 BECN2A8MW95 431 aa12.18□□□□□ -0.46
COL21A1-211ENST00000488912 RHOBTB3O94955 611 aa12.18□□□□□ -0.46
COL21A1-211ENST00000488912 EYA4O95677 639 aa12.18□□□□□ -0.46
COL21A1-211ENST00000488912 CYP11B2P19099 503 aa12.18□□□□□ -0.46
COL21A1-211ENST00000488912 MUTP22033 750 aa12.18□□□□□ -0.46
COL21A1-211ENST00000488912 UBA1P22314 1058 aaKnown RBP12.18□□□□□ -0.46
COL21A1-211ENST00000488912 YY1P25490 414 aa12.18□□□□□ -0.46
COL21A1-211ENST00000488912 SFNP31947 248 aa12.18□□□□□ -0.46
COL21A1-211ENST00000488912 TM4SF4P48230 202 aa12.18□□□□□ -0.46
COL21A1-211ENST00000488912 JAK3P52333 1124 aa12.18□□□□□ -0.46
COL21A1-211ENST00000488912 SP4Q02446 784 aa12.18□□□□□ -0.46
COL21A1-211ENST00000488912 CRHR2Q13324 411 aa12.18□□□□□ -0.46
COL21A1-211ENST00000488912 ZNF658Q5TYW1 1059 aaPredicted RBP12.18□□□□□ -0.46
COL21A1-211ENST00000488912 CNNM4Q6P4Q7 775 aa12.18□□□□□ -0.46
COL21A1-211ENST00000488912 C17orf99Q6UX52 265 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms