RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 ADAM21Q9UKJ8 722 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 SYNPO2Q9UMS6 1093 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.69■□□□□ 0.1
ABCB1-207ENST00000488737 CAPN6Q9Y6Q1 641 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 ATRNL1Q5VV63 1379 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 NOL4O94818 638 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 RPA1P27694 616 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 CIITAP33076 1130 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 AARSP49588 968 aaKnown RBP eCLIP15.69■□□□□ 0.1
ABCB1-207ENST00000488737 HSP90B2PQ58FF3 399 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 FAM83BQ5T0W9 1011 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 SFMBT2Q5VUG0 894 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 SH3BP5LQ7L8J4 393 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 FBXO11Q86XK2 927 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 COL23A1Q86Y22 540 aaPredicted RBP15.69■□□□□ 0.1
ABCB1-207ENST00000488737 CREG2Q8IUH2 290 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 SMCR8Q8TEV9 937 aaPredicted RBP15.69■□□□□ 0.1
ABCB1-207ENST00000488737 AKT1S1Q96B36 256 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 DBNDD1Q9H9R9 158 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 SUGCTQ9HAC7 445 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 MLXIPQ9HAP2 919 aa15.69■□□□□ 0.1
ABCB1-207ENST00000488737 SLX4Q8IY92 1834 aa15.68■□□□□ 0.1
ABCB1-207ENST00000488737 F5H6K3 240 aa15.68■□□□□ 0.1
ABCB1-207ENST00000488737 PDE2AO00408 941 aaPredicted RBP15.68■□□□□ 0.1
ABCB1-207ENST00000488737 CETN3O15182 167 aa15.68■□□□□ 0.1
ABCB1-207ENST00000488737 MOCS3O95396 460 aa15.68■□□□□ 0.1
ABCB1-207ENST00000488737 KRT18P05783 430 aaKnown RBP15.68■□□□□ 0.1
ABCB1-207ENST00000488737 KLRC3Q07444 240 aa15.68■□□□□ 0.1
ABCB1-207ENST00000488737 ABCB5Q2M3G0 1257 aa15.68■□□□□ 0.1
ABCB1-207ENST00000488737 ARSHQ5FYA8 562 aa15.68■□□□□ 0.1
ABCB1-207ENST00000488737 SYDE2Q5VT97 1194 aa15.68■□□□□ 0.1
ABCB1-207ENST00000488737 BTNL9Q6UXG8 535 aa15.68■□□□□ 0.1
ABCB1-207ENST00000488737 SYT2Q8N9I0 419 aaPredicted RBP15.68■□□□□ 0.1
ABCB1-207ENST00000488737 NOX5Q96PH1 765 aa15.68■□□□□ 0.1
ABCB1-207ENST00000488737 LSM14BQ9BX40 385 aaKnown RBP15.68■□□□□ 0.1
ABCB1-207ENST00000488737 FGFBP2Q9BYJ0 223 aa15.68■□□□□ 0.1
ABCB1-207ENST00000488737 DNM3Q9UQ16 869 aa15.68■□□□□ 0.1
ABCB1-207ENST00000488737 ERICH4A6NGS2 130 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 SPDYE3A6NKU9 549 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 ZNF185O15231 689 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 TCP10Q12799 353 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 CATSPER3Q86XQ3 398 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 KIAA0825Q8IV33 1275 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 LENG9Q96B70 501 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 OSBPL9Q96SU4 736 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 TBC1D7Q9P0N9 293 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 TRAF3IP3Q9Y228 551 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 NPHP3-ACAD11A0A0J9YXS1 232 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 POTEFA5A3E0 1075 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 FAM196BA6NMK8 535 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 LRRIQ3A6PVS8 624 aaPredicted RBP15.67■□□□□ 0.1
ABCB1-207ENST00000488737 RAD21O60216 631 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 ENTPD3O75355 529 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 NDUFB10O96000 172 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 MMP10P09238 476 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 POTEIP0CG38 1075 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 SLURP2P0DP57 97 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 STAT3P40763 770 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 CACNB3P54284 484 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 TRAF1Q13077 416 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 ADAM9Q13443 819 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 PRR16Q569H4 304 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 TDRD12Q587J7 1177 aaKnown RBP15.67■□□□□ 0.1
ABCB1-207ENST00000488737 POTEGQ6S5H5 508 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 POTEEQ6S8J3 1075 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 FRMD5Q7Z6J6 570 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 NELFCDQ8IXH7 590 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 AIPL1Q9NZN9 384 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 RNF14Q9UBS8 474 aa15.67■□□□□ 0.1
ABCB1-207ENST00000488737 ECE2O60344 883 aa15.66■□□□□ 0.1
ABCB1-207ENST00000488737 TLR2O60603 784 aa15.66■□□□□ 0.1
ABCB1-207ENST00000488737 CYP3A4P08684 503 aa15.66■□□□□ 0.1
ABCB1-207ENST00000488737 RBM5P52756 815 aaKnown RBP eCLIP15.66■□□□□ 0.1
ABCB1-207ENST00000488737 GFPT1Q06210 699 aaPredicted RBP15.66■□□□□ 0.1
ABCB1-207ENST00000488737 GIT2Q14161 759 aa15.66■□□□□ 0.1
ABCB1-207ENST00000488737 STYK1Q6J9G0 422 aa15.66■□□□□ 0.1
ABCB1-207ENST00000488737 CCNI2Q6ZMN8 369 aaPredicted RBP15.66■□□□□ 0.1
ABCB1-207ENST00000488737 EPM2AIP1Q7L775 607 aaPredicted RBP15.66■□□□□ 0.1
ABCB1-207ENST00000488737 COG1Q8WTW3 980 aa15.66■□□□□ 0.1
ABCB1-207ENST00000488737 P2RX7Q99572 595 aaKnown RBP15.66■□□□□ 0.1
ABCB1-207ENST00000488737 POLR3CQ9BUI4 534 aaPredicted RBP15.66■□□□□ 0.1
ABCB1-207ENST00000488737 KCNQ5Q9NR82 932 aa15.66■□□□□ 0.1
ABCB1-207ENST00000488737 VPS18Q9P253 973 aa15.66■□□□□ 0.1
ABCB1-207ENST00000488737 PIK3CDO00329 1044 aa15.65■□□□□ 0.1
ABCB1-207ENST00000488737 SPATA31C1P0DKV0 1188 aa15.65■□□□□ 0.1
ABCB1-207ENST00000488737 BMP3P12645 472 aa15.65■□□□□ 0.1
ABCB1-207ENST00000488737 EPS15P42566 896 aa15.65■□□□□ 0.1
ABCB1-207ENST00000488737 POLR2FP61218 127 aaKnown RBP15.65■□□□□ 0.1
ABCB1-207ENST00000488737 KNOP1Q1ED39 458 aaKnown RBP15.65■□□□□ 0.1
ABCB1-207ENST00000488737 BMT2Q1RMZ1 405 aa15.65■□□□□ 0.1
ABCB1-207ENST00000488737 SHROOM1Q2M3G4 852 aaPredicted RBP15.65■□□□□ 0.1
ABCB1-207ENST00000488737 CCDC125Q86Z20 511 aa15.65■□□□□ 0.1
ABCB1-207ENST00000488737 GANQ9H2C0 597 aa15.65■□□□□ 0.1
ABCB1-207ENST00000488737 NLRC4Q9NPP4 1024 aa15.65■□□□□ 0.1
ABCB1-207ENST00000488737 PLCB1Q9NQ66 1216 aa15.65■□□□□ 0.1
ABCB1-207ENST00000488737 PCDHAC2Q9Y5I4 1007 aa15.65■□□□□ 0.1
ABCB1-207ENST00000488737 PSME4Q14997 1843 aa15.65■□□□□ 0.1
ABCB1-207ENST00000488737 PDXKO00764 312 aa15.65■□□□□ 0.1
ABCB1-207ENST00000488737 CALUO43852 315 aaPredicted RBP15.65■□□□□ 0.1
ABCB1-207ENST00000488737 NR2F2P24468 414 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms