RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 TRIM71Q2Q1W2 868 aaKnown RBP18.16■□□□□ 0.5
CTDSP1-209ENST00000488627 GALNT17Q6IS24 598 aa18.16■□□□□ 0.5
CTDSP1-209ENST00000488627 ZNF365Q70YC5 407 aa18.16■□□□□ 0.5
CTDSP1-209ENST00000488627 BLIDQ8IZY5 108 aa18.16■□□□□ 0.5
CTDSP1-209ENST00000488627 WNT8BQ93098 351 aa18.16■□□□□ 0.5
CTDSP1-209ENST00000488627 LENG9Q96B70 501 aa18.16■□□□□ 0.5
CTDSP1-209ENST00000488627 PHF20Q9BVI0 1012 aa18.16■□□□□ 0.5
CTDSP1-209ENST00000488627 RNPEPQ9H4A4 650 aa18.16■□□□□ 0.5
CTDSP1-209ENST00000488627 GJB4Q9NTQ9 266 aa18.16■□□□□ 0.5
CTDSP1-209ENST00000488627 SLC9A2Q9UBY0 812 aa18.16■□□□□ 0.5
CTDSP1-209ENST00000488627 KCNJ14Q9UNX9 436 aa18.16■□□□□ 0.5
CTDSP1-209ENST00000488627 LGR5O75473 907 aa18.15■□□□□ 0.5
CTDSP1-209ENST00000488627 ATG7O95352 703 aa18.15■□□□□ 0.5
CTDSP1-209ENST00000488627 ADAM17P78536 824 aa18.15■□□□□ 0.5
CTDSP1-209ENST00000488627 PTK7Q13308 1070 aa18.15■□□□□ 0.5
CTDSP1-209ENST00000488627 BFSP2Q13515 415 aa18.15■□□□□ 0.5
CTDSP1-209ENST00000488627 GPR153Q6NV75 609 aa18.15■□□□□ 0.5
CTDSP1-209ENST00000488627 NSUN7Q8NE18 718 aaKnown RBP18.15■□□□□ 0.5
CTDSP1-209ENST00000488627 CAGE1Q8TC20 777 aa18.15■□□□□ 0.5
CTDSP1-209ENST00000488627 RNPC3Q96LT9 517 aaKnown RBP18.15■□□□□ 0.5
CTDSP1-209ENST00000488627 SDF4Q9BRK5 362 aa18.15■□□□□ 0.5
CTDSP1-209ENST00000488627 ORC3Q9UBD5 711 aaPredicted RBP18.15■□□□□ 0.5
CTDSP1-209ENST00000488627 NOD1Q9Y239 953 aa18.15■□□□□ 0.5
CTDSP1-209ENST00000488627 CCNE2O96020 404 aa18.14■□□□□ 0.49
CTDSP1-209ENST00000488627 USP11P51784 963 aa18.14■□□□□ 0.49
CTDSP1-209ENST00000488627 ACTR2P61160 394 aa18.14■□□□□ 0.49
CTDSP1-209ENST00000488627 TRAF7Q6Q0C0 670 aa18.14■□□□□ 0.49
CTDSP1-209ENST00000488627 SERINC5Q86VE9 423 aa18.14■□□□□ 0.49
CTDSP1-209ENST00000488627 TBCKQ8TEA7 893 aa18.14■□□□□ 0.49
CTDSP1-209ENST00000488627 HERVK_113Q902F9 699 aa18.14■□□□□ 0.49
CTDSP1-209ENST00000488627 SETD4Q9NVD3 440 aa18.14■□□□□ 0.49
CTDSP1-209ENST00000488627 ZNF215Q9UL58 517 aaPredicted RBP18.14■□□□□ 0.49
CTDSP1-209ENST00000488627 LIMCH1Q9UPQ0 1083 aa18.14■□□□□ 0.49
CTDSP1-209ENST00000488627 LAMA2P24043 3122 aaKnown RBP18.14■□□□□ 0.49
CTDSP1-209ENST00000488627 C17orf102A2RUQ5 167 aa18.13■□□□□ 0.49
CTDSP1-209ENST00000488627 IPO5O00410 1097 aaKnown RBP18.13■□□□□ 0.49
CTDSP1-209ENST00000488627 TREHO43280 583 aa18.13■□□□□ 0.49
CTDSP1-209ENST00000488627 JAK2O60674 1132 aa18.13■□□□□ 0.49
CTDSP1-209ENST00000488627 FGBP02675 491 aa18.13■□□□□ 0.49
CTDSP1-209ENST00000488627 CKBP12277 381 aa18.13■□□□□ 0.49
CTDSP1-209ENST00000488627 PRR16Q569H4 304 aa18.13■□□□□ 0.49
CTDSP1-209ENST00000488627 PSRC1Q6PGN9 363 aaPredicted RBP18.13■□□□□ 0.49
CTDSP1-209ENST00000488627 RPUSD2Q8IZ73 545 aaKnown RBP18.13■□□□□ 0.49
CTDSP1-209ENST00000488627 RETREG2Q8NC44 543 aa18.13■□□□□ 0.49
CTDSP1-209ENST00000488627 AFAP1L1Q8TED9 768 aa18.13■□□□□ 0.49
CTDSP1-209ENST00000488627 UIMC1Q96RL1 719 aa18.13■□□□□ 0.49
CTDSP1-209ENST00000488627 SMARCAD1Q9H4L7 1026 aa18.13■□□□□ 0.49
CTDSP1-209ENST00000488627 MYH7BA7E2Y1 1941 aa18.12■□□□□ 0.49
CTDSP1-209ENST00000488627 CYP3A7-CYP3A51PA0A087WV96 503 aa18.12■□□□□ 0.49
CTDSP1-209ENST00000488627 IGKV6D-21A0A0A0MT36 114 aa18.12■□□□□ 0.49
CTDSP1-209ENST00000488627 SELPP16109 830 aa18.12■□□□□ 0.49
CTDSP1-209ENST00000488627 CYP3A7P24462 503 aa18.12■□□□□ 0.49
CTDSP1-209ENST00000488627 SMAD3P84022 425 aaKnown RBP18.12■□□□□ 0.49
CTDSP1-209ENST00000488627 SETQ01105 290 aaPredicted RBP18.12■□□□□ 0.49
CTDSP1-209ENST00000488627 FAM109BQ6ICB4 259 aaPredicted RBP18.12■□□□□ 0.49
CTDSP1-209ENST00000488627 ABHD15Q6UXT9 468 aa18.12■□□□□ 0.49
CTDSP1-209ENST00000488627 OXER1Q8TDS5 423 aa18.12■□□□□ 0.49
CTDSP1-209ENST00000488627 ATP6V0A1Q93050 837 aa18.12■□□□□ 0.49
CTDSP1-209ENST00000488627 ZNF577Q9BSK1 485 aa18.12■□□□□ 0.49
CTDSP1-209ENST00000488627 ERAP1Q9NZ08 941 aa18.12■□□□□ 0.49
CTDSP1-209ENST00000488627 CXXC1Q9P0U4 656 aaPredicted RBP18.12■□□□□ 0.49
CTDSP1-209ENST00000488627 EMSYQ7Z589 1322 aa18.12■□□□□ 0.49
CTDSP1-209ENST00000488627 MARK3P27448 753 aa18.11■□□□□ 0.49
CTDSP1-209ENST00000488627 RFC2P35250 354 aa18.11■□□□□ 0.49
CTDSP1-209ENST00000488627 OTOP2Q7RTS6 562 aa18.11■□□□□ 0.49
CTDSP1-209ENST00000488627 CCDC155Q8N6L0 562 aa18.11■□□□□ 0.49
CTDSP1-209ENST00000488627 LMBR1Q8WVP7 490 aa18.11■□□□□ 0.49
CTDSP1-209ENST00000488627 WASF1Q92558 559 aa18.11■□□□□ 0.49
CTDSP1-209ENST00000488627 GLG1Q92896 1179 aa18.11■□□□□ 0.49
CTDSP1-209ENST00000488627 MBOAT7Q96N66 472 aa18.11■□□□□ 0.49
CTDSP1-209ENST00000488627 TBC1D22BQ9NU19 505 aa18.11■□□□□ 0.49
CTDSP1-209ENST00000488627 NRCAMQ92823 1304 aa18.11■□□□□ 0.49
CTDSP1-209ENST00000488627 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.1■□□□□ 0.49
CTDSP1-209ENST00000488627 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.1■□□□□ 0.49
CTDSP1-209ENST00000488627 RBAK-RBAKDNI3L0D1 243 aa18.1■□□□□ 0.49
CTDSP1-209ENST00000488627 DDX39AO00148 427 aaKnown RBP18.1■□□□□ 0.49
CTDSP1-209ENST00000488627 MSH4O15457 936 aa18.1■□□□□ 0.49
CTDSP1-209ENST00000488627 PFKMP08237 780 aa18.1■□□□□ 0.49
CTDSP1-209ENST00000488627 XBP1P17861 261 aa18.1■□□□□ 0.49
CTDSP1-209ENST00000488627 MBTPS1Q14703 1052 aa18.1■□□□□ 0.49
CTDSP1-209ENST00000488627 Q4G0T1 1027 aa18.1■□□□□ 0.49
CTDSP1-209ENST00000488627 ZNF618Q5T7W0 954 aa18.1■□□□□ 0.49
CTDSP1-209ENST00000488627 LRRC8DQ7L1W4 858 aa18.1■□□□□ 0.49
CTDSP1-209ENST00000488627 PLPPR4Q7Z2D5 763 aa18.1■□□□□ 0.49
CTDSP1-209ENST00000488627 KRT25Q7Z3Z0 450 aa18.1■□□□□ 0.49
CTDSP1-209ENST00000488627 DEFB128Q7Z7B8 93 aa18.1■□□□□ 0.49
CTDSP1-209ENST00000488627 NBNO60934 754 aa18.09■□□□□ 0.49
CTDSP1-209ENST00000488627 TDP2O95551 362 aa18.09■□□□□ 0.49
CTDSP1-209ENST00000488627 CXCL10P02778 98 aa18.09■□□□□ 0.49
CTDSP1-209ENST00000488627 GNAT1P11488 350 aa18.09■□□□□ 0.49
CTDSP1-209ENST00000488627 STAT5BP51692 787 aa18.09■□□□□ 0.49
CTDSP1-209ENST00000488627 NONOQ15233 471 aaKnown RBP eCLIP18.09■□□□□ 0.491e-9■■■□□ 18.4
CTDSP1-209ENST00000488627 INF2Q27J81 1249 aa18.09■□□□□ 0.49
CTDSP1-209ENST00000488627 EARS2Q5JPH6 523 aaKnown RBP18.09■□□□□ 0.49
CTDSP1-209ENST00000488627 MARCH8Q5T0T0 291 aa18.09■□□□□ 0.49
CTDSP1-209ENST00000488627 MOXD1Q6UVY6 613 aa18.09■□□□□ 0.49
CTDSP1-209ENST00000488627 Q7L0L9 218 aa18.09■□□□□ 0.49
CTDSP1-209ENST00000488627 SLC5A5Q92911 643 aa18.09■□□□□ 0.49
CTDSP1-209ENST00000488627 TNFRSF25Q93038 417 aa18.09■□□□□ 0.49
CTDSP1-209ENST00000488627 MBLAC1A4D2B0 266 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms