RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 H3BQ06 376 aaPredicted RBP21.97■■□□□ 1.11
GGPS1-206ENST00000488594 RBAK-RBAKDNI3L0D1 243 aa21.97■■□□□ 1.11
GGPS1-206ENST00000488594 PIK3CDO00329 1044 aa21.97■■□□□ 1.11
GGPS1-206ENST00000488594 RB1P06400 928 aa21.97■■□□□ 1.11
GGPS1-206ENST00000488594 UTP14CQ5TAP6 766 aaKnown RBP21.97■■□□□ 1.11
GGPS1-206ENST00000488594 NLRX1Q86UT6 975 aa21.97■■□□□ 1.11
GGPS1-206ENST00000488594 FIBCD1Q8N539 461 aa21.97■■□□□ 1.11
GGPS1-206ENST00000488594 SENP2Q9HC62 589 aa21.97■■□□□ 1.11
GGPS1-206ENST00000488594 C5orf67F2Z3F1 127 aa21.96■■□□□ 1.11
GGPS1-206ENST00000488594 RRP36Q96EU6 259 aaKnown RBP21.96■■□□□ 1.11
GGPS1-206ENST00000488594 MAP3K14Q99558 947 aa21.96■■□□□ 1.11
GGPS1-206ENST00000488594 C11orf84Q9BUA3 381 aaPredicted RBP21.96■■□□□ 1.11
GGPS1-206ENST00000488594 PRKAG3Q9UGI9 489 aa21.96■■□□□ 1.11
GGPS1-206ENST00000488594 SMARCA1P28370 1054 aa21.95■■□□□ 1.1
GGPS1-206ENST00000488594 KIF5BP33176 963 aa21.95■■□□□ 1.1
GGPS1-206ENST00000488594 RSPH3Q86UC2 560 aa21.95■■□□□ 1.1
GGPS1-206ENST00000488594 CDHR1Q96JP9 859 aa21.95■■□□□ 1.1
GGPS1-206ENST00000488594 SPZ1Q9BXG8 430 aa21.95■■□□□ 1.1
GGPS1-206ENST00000488594 LMAN2LQ9H0V9 348 aa21.95■■□□□ 1.1
GGPS1-206ENST00000488594 E7EWF7 191 aa21.94■■□□□ 1.1
GGPS1-206ENST00000488594 CHRNA1P02708 482 aa21.94■■□□□ 1.1
GGPS1-206ENST00000488594 CTNNB1P35222 781 aa21.94■■□□□ 1.1
GGPS1-206ENST00000488594 SP4Q02446 784 aa21.94■■□□□ 1.1
GGPS1-206ENST00000488594 TTC22Q5TAA0 569 aa21.94■■□□□ 1.1
GGPS1-206ENST00000488594 EP400NLQ6ZTU2 488 aa21.94■■□□□ 1.1
GGPS1-206ENST00000488594 CTCFLQ8NI51 663 aaPredicted RBP21.94■■□□□ 1.1
GGPS1-206ENST00000488594 PIBF1Q8WXW3 757 aa21.94■■□□□ 1.1
GGPS1-206ENST00000488594 EHMT1Q9H9B1 1298 aa21.94■■□□□ 1.1
GGPS1-206ENST00000488594 SEC63Q9UGP8 760 aaKnown RBP21.94■■□□□ 1.1
GGPS1-206ENST00000488594 DCXO43602 365 aa21.93■■□□□ 1.1
GGPS1-206ENST00000488594 DDAH1O94760 285 aa21.93■■□□□ 1.1
GGPS1-206ENST00000488594 RPLP2P05387 115 aaKnown RBP21.93■■□□□ 1.1
GGPS1-206ENST00000488594 GSPT1P15170 499 aaKnown RBP21.93■■□□□ 1.1
GGPS1-206ENST00000488594 TCF7P36402 384 aaPredicted RBP21.93■■□□□ 1.1
GGPS1-206ENST00000488594 BMPR1AP36894 532 aa21.93■■□□□ 1.1
GGPS1-206ENST00000488594 PTH1RQ03431 593 aa21.93■■□□□ 1.1
GGPS1-206ENST00000488594 CSPP1Q1MSJ5 1256 aa21.93■■□□□ 1.1
GGPS1-206ENST00000488594 USP17L6PQ6QN14 398 aa21.93■■□□□ 1.1
GGPS1-206ENST00000488594 IGDCC4Q8TDY8 1250 aa21.93■■□□□ 1.1
GGPS1-206ENST00000488594 GPRASP2Q96D09 838 aa21.93■■□□□ 1.1
GGPS1-206ENST00000488594 LZTS2Q9BRK4 669 aa21.93■■□□□ 1.1
GGPS1-206ENST00000488594 CLDND1Q9NY35 253 aa21.93■■□□□ 1.1
GGPS1-206ENST00000488594 ADGRA3Q8IWK6 1321 aa21.92■■□□□ 1.1
GGPS1-206ENST00000488594 MEIS2O14770 477 aa21.92■■□□□ 1.1
GGPS1-206ENST00000488594 GHRP10912 638 aa21.92■■□□□ 1.1
GGPS1-206ENST00000488594 ZP2Q05996 745 aa21.92■■□□□ 1.1
GGPS1-206ENST00000488594 PPFIA1Q13136 1202 aa21.92■■□□□ 1.1
GGPS1-206ENST00000488594 ERAP1Q9NZ08 941 aa21.92■■□□□ 1.1
GGPS1-206ENST00000488594 TELO2Q9Y4R8 837 aa21.92■■□□□ 1.1
GGPS1-206ENST00000488594 CHMLP26374 656 aa21.91■■□□□ 1.1
GGPS1-206ENST00000488594 GNAQP50148 359 aa21.91■■□□□ 1.1
GGPS1-206ENST00000488594 ADHFE1Q8IWW8 467 aa21.91■■□□□ 1.1
GGPS1-206ENST00000488594 EXOC6Q8TAG9 804 aa21.91■■□□□ 1.1
GGPS1-206ENST00000488594 SEPT1Q8WYJ6 367 aa21.91■■□□□ 1.1
GGPS1-206ENST00000488594 CLP1Q92989 425 aaKnown RBP21.91■■□□□ 1.1
GGPS1-206ENST00000488594 BAZ2BQ9UIF8 2168 aaKnown RBP21.91■■□□□ 1.1
GGPS1-206ENST00000488594 TUBE1Q9UJT0 475 aa21.91■■□□□ 1.1
GGPS1-206ENST00000488594 POTEB3A0JP26 581 aa21.9■■□□□ 1.1
GGPS1-206ENST00000488594 MBLAC1A4D2B0 266 aaPredicted RBP21.9■■□□□ 1.1
GGPS1-206ENST00000488594 LINC00271P0C7V0 271 aa21.9■■□□□ 1.1
GGPS1-206ENST00000488594 KCNA2P16389 499 aa21.9■■□□□ 1.1
GGPS1-206ENST00000488594 ANTXR2P58335 489 aa21.9■■□□□ 1.1
GGPS1-206ENST00000488594 MGAT3Q09327 533 aa21.9■■□□□ 1.1
GGPS1-206ENST00000488594 LPIN1Q14693 890 aa21.9■■□□□ 1.1
GGPS1-206ENST00000488594 CTC1Q2NKJ3 1217 aa21.9■■□□□ 1.1
GGPS1-206ENST00000488594 POTEBQ6S5H4 581 aa21.9■■□□□ 1.1
GGPS1-206ENST00000488594 RUFY4Q6ZNE9 571 aa21.9■■□□□ 1.1
GGPS1-206ENST00000488594 ZNF654Q8IZM8 581 aa21.9■■□□□ 1.1
GGPS1-206ENST00000488594 UIMC1Q96RL1 719 aa21.9■■□□□ 1.1
GGPS1-206ENST00000488594 MTA3Q9BTC8 594 aa21.9■■□□□ 1.1
GGPS1-206ENST00000488594 PLVAPQ9BX97 442 aa21.9■■□□□ 1.1
GGPS1-206ENST00000488594 UPF3BQ9BZI7 483 aaKnown RBP21.9■■□□□ 1.1
GGPS1-206ENST00000488594 RC3H2Q9HBD1 1191 aaKnown RBP21.9■■□□□ 1.1
GGPS1-206ENST00000488594 RALGAPA2Q2PPJ7 1873 aa21.9■■□□□ 1.1
GGPS1-206ENST00000488594 C19orf67A6NJJ6 358 aa21.89■■□□□ 1.1
GGPS1-206ENST00000488594 ENPP3O14638 875 aa21.89■■□□□ 1.1
GGPS1-206ENST00000488594 GRIK4Q16099 956 aa21.89■■□□□ 1.1
GGPS1-206ENST00000488594 MB21D2Q8IYB1 491 aaPredicted RBP21.89■■□□□ 1.1
GGPS1-206ENST00000488594 GLG1Q92896 1179 aa21.89■■□□□ 1.1
GGPS1-206ENST00000488594 SMARCAD1Q9H4L7 1026 aa21.89■■□□□ 1.1
GGPS1-206ENST00000488594 PSTPIP2Q9H939 334 aa21.89■■□□□ 1.1
GGPS1-206ENST00000488594 SUPT16HQ9Y5B9 1047 aaKnown RBP21.89■■□□□ 1.1
GGPS1-206ENST00000488594 TAF6LQ9Y6J9 622 aa21.89■■□□□ 1.1
GGPS1-206ENST00000488594 GRM6O15303 877 aa21.88■■□□□ 1.09
GGPS1-206ENST00000488594 MAFGO15525 162 aa21.88■■□□□ 1.09
GGPS1-206ENST00000488594 BTG3Q14201 252 aaPredicted RBP21.88■■□□□ 1.09
GGPS1-206ENST00000488594 FBXO47Q5MNV8 452 aa21.88■■□□□ 1.09
GGPS1-206ENST00000488594 TSHZ1Q6ZSZ6 1077 aa21.88■■□□□ 1.09
GGPS1-206ENST00000488594 TMTC2Q8N394 836 aa21.88■■□□□ 1.09
GGPS1-206ENST00000488594 ZNF689Q96CS4 500 aaPredicted RBP21.88■■□□□ 1.09
GGPS1-206ENST00000488594 POP1Q99575 1024 aaKnown RBP21.88■■□□□ 1.09
GGPS1-206ENST00000488594 LY9Q9HBG7 655 aa21.88■■□□□ 1.09
GGPS1-206ENST00000488594 MUC6Q6W4X9 2439 aa21.88■■□□□ 1.09
GGPS1-206ENST00000488594 GSTTP1A0A1W2PQM5 241 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 SGSM2O43147 1006 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 ATP9AO75110 1047 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 DGKIO75912 1065 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 ITGB5P18084 799 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 MARK3P27448 753 aa21.87■■□□□ 1.09
GGPS1-206ENST00000488594 PDE4AP27815 886 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms