RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 ZNF689Q96CS4 500 aaPredicted RBP10.81□□□□□ -0.68
COL17A1-207ENST00000488320 TTC14Q96N46 770 aa10.81□□□□□ -0.68
COL17A1-207ENST00000488320 VAT1LQ9HCJ6 419 aa10.81□□□□□ -0.68
COL17A1-207ENST00000488320 TCP11L1Q9NUJ3 509 aa10.81□□□□□ -0.68
COL17A1-207ENST00000488320 ANAPC4Q9UJX5 808 aa10.81□□□□□ -0.68
COL17A1-207ENST00000488320 MYH6P13533 1939 aa10.8□□□□□ -0.68
COL17A1-207ENST00000488320 DGKIO75912 1065 aa10.8□□□□□ -0.68
COL17A1-207ENST00000488320 GLP2RO95838 553 aa10.8□□□□□ -0.68
COL17A1-207ENST00000488320 LGALS2P05162 132 aa10.8□□□□□ -0.68
COL17A1-207ENST00000488320 SP100P23497 879 aaPredicted RBP10.8□□□□□ -0.68
COL17A1-207ENST00000488320 SP2Q02086 613 aa10.8□□□□□ -0.68
COL17A1-207ENST00000488320 PAN2Q504Q3 1202 aaKnown RBP10.8□□□□□ -0.68
COL17A1-207ENST00000488320 FAM26DQ5JW98 314 aa10.8□□□□□ -0.68
COL17A1-207ENST00000488320 SPOUT1Q5T280 376 aaKnown RBP10.8□□□□□ -0.68
COL17A1-207ENST00000488320 MCTP2Q6DN12 878 aa10.8□□□□□ -0.68
COL17A1-207ENST00000488320 NEK1Q96PY6 1258 aa10.8□□□□□ -0.68
COL17A1-207ENST00000488320 USP26Q9BXU7 913 aa10.8□□□□□ -0.68
COL17A1-207ENST00000488320 MFSD1Q9H3U5 465 aa10.8□□□□□ -0.68
COL17A1-207ENST00000488320 MRPL42Q9Y6G3 142 aaKnown RBP10.8□□□□□ -0.68
COL17A1-207ENST00000488320 CCDC171Q6TFL3 1326 aa10.8□□□□□ -0.68
COL17A1-207ENST00000488320 CACNA1HO95180 2353 aa10.79□□□□□ -0.68
COL17A1-207ENST00000488320 CHRNA1P02708 482 aa10.79□□□□□ -0.68
COL17A1-207ENST00000488320 SRGAP2BP0DMP2 458 aa10.79□□□□□ -0.68
COL17A1-207ENST00000488320 SNHG28P0DPA3 235 aa10.79□□□□□ -0.68
COL17A1-207ENST00000488320 TGFB3P10600 412 aa10.79□□□□□ -0.68
COL17A1-207ENST00000488320 IBSPP21815 317 aaPredicted RBP10.79□□□□□ -0.68
COL17A1-207ENST00000488320 UTP14CQ5TAP6 766 aaKnown RBP10.79□□□□□ -0.68
COL17A1-207ENST00000488320 RSPH3Q86UC2 560 aa10.79□□□□□ -0.68
COL17A1-207ENST00000488320 CMTR2Q8IYT2 770 aaKnown RBP10.79□□□□□ -0.68
COL17A1-207ENST00000488320 ADGRF4Q8IZF3 695 aa10.79□□□□□ -0.68
COL17A1-207ENST00000488320 TMEM105Q8N8V8 129 aa10.79□□□□□ -0.68
COL17A1-207ENST00000488320 KREMEN2Q8NCW0 462 aa10.79□□□□□ -0.68
COL17A1-207ENST00000488320 ZFP91Q96JP5 570 aaPredicted RBP10.79□□□□□ -0.68
COL17A1-207ENST00000488320 TSHZ2Q9NRE2 1034 aa10.79□□□□□ -0.68
COL17A1-207ENST00000488320 NR2E1Q9Y466 385 aa10.79□□□□□ -0.68
COL17A1-207ENST00000488320 PCDHGC5Q9Y5F6 944 aa10.79□□□□□ -0.68
COL17A1-207ENST00000488320 MYO10Q9HD67 2058 aa10.78□□□□□ -0.68
COL17A1-207ENST00000488320 RGS20O76081 388 aa10.78□□□□□ -0.68
COL17A1-207ENST00000488320 FGRP09769 529 aa10.78□□□□□ -0.68
COL17A1-207ENST00000488320 STAG3L1P0CL83 205 aa10.78□□□□□ -0.68
COL17A1-207ENST00000488320 UBA1P22314 1058 aaKnown RBP10.78□□□□□ -0.68
COL17A1-207ENST00000488320 CCND2P30279 289 aa10.78□□□□□ -0.68
COL17A1-207ENST00000488320 HOXC8P31273 242 aa10.78□□□□□ -0.68
COL17A1-207ENST00000488320 TECP42680 631 aa10.78□□□□□ -0.68
COL17A1-207ENST00000488320 LPIN1Q14693 890 aa10.78□□□□□ -0.68
COL17A1-207ENST00000488320 QRICH1Q2TAL8 776 aa10.78□□□□□ -0.68
COL17A1-207ENST00000488320 VPS53Q5VIR6 699 aa10.78□□□□□ -0.68
COL17A1-207ENST00000488320 VSIG10LQ86VR7 867 aa10.78□□□□□ -0.68
COL17A1-207ENST00000488320 UBALD2Q8IYN6 164 aa10.78□□□□□ -0.68
COL17A1-207ENST00000488320 KCNG4Q8TDN1 519 aa10.78□□□□□ -0.68
COL17A1-207ENST00000488320 SUSD6Q92537 303 aa10.78□□□□□ -0.68
COL17A1-207ENST00000488320 PDCD2LQ9BRP1 358 aa10.78□□□□□ -0.68
COL17A1-207ENST00000488320 APOL5Q9BWW9 433 aa10.78□□□□□ -0.68
COL17A1-207ENST00000488320 RC3H2Q9HBD1 1191 aaKnown RBP10.78□□□□□ -0.68
COL17A1-207ENST00000488320 ZNF215Q9UL58 517 aaPredicted RBP10.78□□□□□ -0.68
COL17A1-207ENST00000488320 LRFN2Q9ULH4 789 aa10.78□□□□□ -0.68
COL17A1-207ENST00000488320 SUPT16HQ9Y5B9 1047 aaKnown RBP10.78□□□□□ -0.68
COL17A1-207ENST00000488320 PCDHB12Q9Y5F1 795 aa10.78□□□□□ -0.68
COL17A1-207ENST00000488320 FAM186AA6NE01 2351 aa10.78□□□□□ -0.68
COL17A1-207ENST00000488320 TTC3P53804 2025 aa10.78□□□□□ -0.68
COL17A1-207ENST00000488320 RIF1Q5UIP0 2472 aaKnown RBP10.78□□□□□ -0.68
COL17A1-207ENST00000488320 FSD2A1L4K1 749 aa10.77□□□□□ -0.69
COL17A1-207ENST00000488320 RBM10P98175 930 aaKnown RBP10.77□□□□□ -0.69
COL17A1-207ENST00000488320 MTMR3Q13615 1198 aa10.77□□□□□ -0.69
COL17A1-207ENST00000488320 PGM5Q15124 567 aa10.77□□□□□ -0.69
COL17A1-207ENST00000488320 ASTLQ6HA08 431 aaPredicted RBP10.77□□□□□ -0.69
COL17A1-207ENST00000488320 MFSD6Q6ZSS7 791 aa10.77□□□□□ -0.69
COL17A1-207ENST00000488320 CYFIP1Q7L576 1253 aa10.77□□□□□ -0.69
COL17A1-207ENST00000488320 DGLUCYQ7Z3D6 616 aa10.77□□□□□ -0.69
COL17A1-207ENST00000488320 MIER1Q8N108 512 aa10.77□□□□□ -0.69
COL17A1-207ENST00000488320 GPKOWQ92917 476 aaPredicted RBP eCLIP10.77□□□□□ -0.69
COL17A1-207ENST00000488320 CDCA3Q99618 268 aaPredicted RBP10.77□□□□□ -0.69
COL17A1-207ENST00000488320 ZKSCAN3Q9BRR0 538 aa10.77□□□□□ -0.69
COL17A1-207ENST00000488320 BCAS3Q9H6U6 928 aa10.77□□□□□ -0.69
COL17A1-207ENST00000488320 EHMT1Q9H9B1 1298 aa10.77□□□□□ -0.69
COL17A1-207ENST00000488320 SORCS3Q9UPU3 1222 aa10.77□□□□□ -0.69
COL17A1-207ENST00000488320 KIAA1671Q9BY89 1806 aa10.77□□□□□ -0.69
COL17A1-207ENST00000488320 MED19A0JLT2 244 aaPredicted RBP10.76□□□□□ -0.69
COL17A1-207ENST00000488320 FOXP2O15409 715 aa10.76□□□□□ -0.69
COL17A1-207ENST00000488320 FGAP02671 866 aa10.76□□□□□ -0.69
COL17A1-207ENST00000488320 HOXA13P31271 388 aaPredicted RBP10.76□□□□□ -0.69
COL17A1-207ENST00000488320 CD52P31358 61 aa10.76□□□□□ -0.69
COL17A1-207ENST00000488320 HAND2P61296 217 aa10.76□□□□□ -0.69
COL17A1-207ENST00000488320 NEDD9Q14511 834 aa10.76□□□□□ -0.69
COL17A1-207ENST00000488320 ALX1Q15699 326 aa10.76□□□□□ -0.69
COL17A1-207ENST00000488320 LLGL2Q6P1M3 1020 aa10.76□□□□□ -0.69
COL17A1-207ENST00000488320 TAF2Q6P1X5 1199 aa10.76□□□□□ -0.69
COL17A1-207ENST00000488320 TSHZ1Q6ZSZ6 1077 aa10.76□□□□□ -0.69
COL17A1-207ENST00000488320 STOX1Q6ZVD7 989 aa10.76□□□□□ -0.69
COL17A1-207ENST00000488320 NPAS4Q8IUM7 802 aa10.76□□□□□ -0.69
COL17A1-207ENST00000488320 PNMA1Q8ND90 353 aa10.76□□□□□ -0.69
COL17A1-207ENST00000488320 ATP8B4Q8TF62 1192 aa10.76□□□□□ -0.69
COL17A1-207ENST00000488320 LMBR1Q8WVP7 490 aa10.76□□□□□ -0.69
COL17A1-207ENST00000488320 AMNQ9BXJ7 453 aa10.76□□□□□ -0.69
COL17A1-207ENST00000488320 FTHL17Q9BXU8 183 aa10.76□□□□□ -0.69
COL17A1-207ENST00000488320 KAT14Q9H8E8 782 aa10.76□□□□□ -0.69
COL17A1-207ENST00000488320 AAASQ9NRG9 546 aa10.76□□□□□ -0.69
COL17A1-207ENST00000488320 MAP3K20Q9NYL2 800 aaKnown RBP10.76□□□□□ -0.69
COL17A1-207ENST00000488320 CDY2AQ9Y6F7 541 aa10.76□□□□□ -0.69
COL17A1-207ENST00000488320 TTC41PQ6P2S7 1318 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms