RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 CKBP12277 381 aa27.02■■□□□ 1.92
RNF38-208ENST00000488058 SCRN1Q12765 414 aa27.02■■□□□ 1.92
RNF38-208ENST00000488058 ANKRD1Q15327 319 aa27.02■■□□□ 1.92
RNF38-208ENST00000488058 PLA2G4DQ86XP0 818 aa27.02■■□□□ 1.92
RNF38-208ENST00000488058 GLG1Q92896 1179 aa27.02■■□□□ 1.92
RNF38-208ENST00000488058 WNT8BQ93098 351 aa27.02■■□□□ 1.92
RNF38-208ENST00000488058 RNPEPQ9H4A4 650 aa27.02■■□□□ 1.92
RNF38-208ENST00000488058 AGO4Q9HCK5 861 aaKnown RBP27.02■■□□□ 1.92
RNF38-208ENST00000488058 SH3GLB2Q9NR46 395 aa27.02■■□□□ 1.92
RNF38-208ENST00000488058 SETD4Q9NVD3 440 aa27.02■■□□□ 1.92
RNF38-208ENST00000488058 DDX39AO00148 427 aaKnown RBP27.01■■□□□ 1.91
RNF38-208ENST00000488058 MEIS1O00470 390 aa27.01■■□□□ 1.91
RNF38-208ENST00000488058 ACTN1P12814 892 aa27.01■■□□□ 1.91
RNF38-208ENST00000488058 MARK3P27448 753 aa27.01■■□□□ 1.91
RNF38-208ENST00000488058 UIMC1Q96RL1 719 aa27.01■■□□□ 1.91
RNF38-208ENST00000488058 SLC4A7Q9Y6M7 1214 aa27.01■■□□□ 1.91
RNF38-208ENST00000488058 NFASCO94856 1347 aa27■■□□□ 1.91
RNF38-208ENST00000488058 FAM86B1E9PN63 330 aa27■■□□□ 1.91
RNF38-208ENST00000488058 TREHO43280 583 aa27■■□□□ 1.91
RNF38-208ENST00000488058 CDKL5O76039 1030 aa27■■□□□ 1.91
RNF38-208ENST00000488058 FAM86B2P0C5J1 330 aa27■■□□□ 1.91
RNF38-208ENST00000488058 DNAJB2P25686 324 aa27■■□□□ 1.91
RNF38-208ENST00000488058 AIFM3Q96NN9 605 aa27■■□□□ 1.91
RNF38-208ENST00000488058 KAT6AQ92794 2004 aa26.99■■□□□ 1.91
RNF38-208ENST00000488058 DTNBO60941 627 aa26.99■■□□□ 1.91
RNF38-208ENST00000488058 CYP3A4P08684 503 aa26.99■■□□□ 1.91
RNF38-208ENST00000488058 GNAT1P11488 350 aa26.99■■□□□ 1.91
RNF38-208ENST00000488058 THPOP40225 353 aa26.99■■□□□ 1.91
RNF38-208ENST00000488058 PBX2P40425 430 aa26.99■■□□□ 1.91
RNF38-208ENST00000488058 RBL2Q08999 1139 aa26.99■■□□□ 1.91
RNF38-208ENST00000488058 ITGB3BPQ13352 177 aaPredicted RBP26.99■■□□□ 1.91
RNF38-208ENST00000488058 TRIM71Q2Q1W2 868 aaKnown RBP26.99■■□□□ 1.91
RNF38-208ENST00000488058 ZNF618Q5T7W0 954 aa26.99■■□□□ 1.91
RNF38-208ENST00000488058 NIPA1Q7RTP0 329 aa26.99■■□□□ 1.91
RNF38-208ENST00000488058 SERINC5Q86VE9 423 aa26.99■■□□□ 1.91
RNF38-208ENST00000488058 SMARCAD1Q9H4L7 1026 aa26.99■■□□□ 1.91
RNF38-208ENST00000488058 ERAP1Q9NZ08 941 aa26.99■■□□□ 1.91
RNF38-208ENST00000488058 GBF1Q92538 1859 aa26.98■■□□□ 1.91
RNF38-208ENST00000488058 PFKFB2O60825 505 aa26.98■■□□□ 1.91
RNF38-208ENST00000488058 NEK4P51957 841 aa26.98■■□□□ 1.91
RNF38-208ENST00000488058 ACTR2P61160 394 aa26.98■■□□□ 1.91
RNF38-208ENST00000488058 CRYGNQ8WXF5 182 aa26.98■■□□□ 1.91
RNF38-208ENST00000488058 PBX4Q9BYU1 374 aa26.98■■□□□ 1.91
RNF38-208ENST00000488058 SEMA6BQ9H3T3 888 aa26.98■■□□□ 1.91
RNF38-208ENST00000488058 AZI2Q9H6S1 392 aa26.98■■□□□ 1.91
RNF38-208ENST00000488058 HOXC8P31273 242 aa26.97■■□□□ 1.91
RNF38-208ENST00000488058 LMBR1Q8WVP7 490 aa26.97■■□□□ 1.91
RNF38-208ENST00000488058 TIFAQ96CG3 184 aa26.97■■□□□ 1.91
RNF38-208ENST00000488058 GUCD1Q96NT3 240 aa26.97■■□□□ 1.91
RNF38-208ENST00000488058 TTYH1Q9H313 450 aaPredicted RBP26.97■■□□□ 1.91
RNF38-208ENST00000488058 PCDHA4Q9UN74 947 aa26.97■■□□□ 1.91
RNF38-208ENST00000488058 TET1Q8NFU7 2136 aa26.96■■□□□ 1.91
RNF38-208ENST00000488058 EMSYQ7Z589 1322 aa26.96■■□□□ 1.91
RNF38-208ENST00000488058 IGLV3-22A0A075B6J6 115 aa26.96■■□□□ 1.91
RNF38-208ENST00000488058 SETQ01105 290 aaPredicted RBP26.96■■□□□ 1.91
RNF38-208ENST00000488058 PPFIA1Q13136 1202 aa26.96■■□□□ 1.91
RNF38-208ENST00000488058 PRR16Q569H4 304 aa26.96■■□□□ 1.91
RNF38-208ENST00000488058 ZNF577Q9BSK1 485 aa26.96■■□□□ 1.91
RNF38-208ENST00000488058 MSRAQ9UJ68 235 aa26.96■■□□□ 1.91
RNF38-208ENST00000488058 NRCAMQ92823 1304 aa26.95■■□□□ 1.91
RNF38-208ENST00000488058 RBAK-RBAKDNI3L0D1 243 aa26.95■■□□□ 1.9
RNF38-208ENST00000488058 NBNO60934 754 aa26.95■■□□□ 1.9
RNF38-208ENST00000488058 PARNO95453 639 aaKnown RBP26.95■■□□□ 1.9
RNF38-208ENST00000488058 GPNMBQ14956 572 aa26.95■■□□□ 1.9
RNF38-208ENST00000488058 BLIDQ8IZY5 108 aa26.95■■□□□ 1.9
RNF38-208ENST00000488058 NECAB1Q8N987 351 aa26.95■■□□□ 1.9
RNF38-208ENST00000488058 IL17RAQ96F46 866 aa26.95■■□□□ 1.9
RNF38-208ENST00000488058 PCYT2Q99447 389 aa26.95■■□□□ 1.9
RNF38-208ENST00000488058 TMEM265A0A087WTH1 108 aa26.94■■□□□ 1.9
RNF38-208ENST00000488058 IPO5O00410 1097 aaKnown RBP26.94■■□□□ 1.9
RNF38-208ENST00000488058 LGR5O75473 907 aa26.94■■□□□ 1.9
RNF38-208ENST00000488058 LARGE1O95461 756 aa26.94■■□□□ 1.9
RNF38-208ENST00000488058 CTSHP09668 335 aa26.94■■□□□ 1.9
RNF38-208ENST00000488058 ATP2A2P16615 1042 aaKnown RBP26.94■■□□□ 1.9
RNF38-208ENST00000488058 RABGGTBP53611 331 aa26.94■■□□□ 1.9
RNF38-208ENST00000488058 IGBP1P78318 339 aa26.94■■□□□ 1.9
RNF38-208ENST00000488058 RAB30Q15771 203 aa26.94■■□□□ 1.9
RNF38-208ENST00000488058 GRIK4Q16099 956 aa26.94■■□□□ 1.9
RNF38-208ENST00000488058 TRAF7Q6Q0C0 670 aa26.94■■□□□ 1.9
RNF38-208ENST00000488058 KCNJ14Q9UNX9 436 aa26.94■■□□□ 1.9
RNF38-208ENST00000488058 STK36Q9NRP7 1315 aa26.93■■□□□ 1.9
RNF38-208ENST00000488058 RSPH10B2B2RC85 870 aa26.93■■□□□ 1.9
RNF38-208ENST00000488058 RSPH10BP0C881 870 aa26.93■■□□□ 1.9
RNF38-208ENST00000488058 ME3Q16798 604 aa26.93■■□□□ 1.9
RNF38-208ENST00000488058 C8orf34Q49A92 452 aa26.93■■□□□ 1.9
RNF38-208ENST00000488058 TBCKQ8TEA7 893 aa26.93■■□□□ 1.9
RNF38-208ENST00000488058 TCEAL9Q9UHQ7 104 aa26.93■■□□□ 1.9
RNF38-208ENST00000488058 TRPC6Q9Y210 931 aa26.93■■□□□ 1.9
RNF38-208ENST00000488058 STXBP5LQ9Y2K9 1186 aa26.93■■□□□ 1.9
RNF38-208ENST00000488058 BACH1O14867 736 aa26.92■■□□□ 1.9
RNF38-208ENST00000488058 CCNE2O96020 404 aa26.92■■□□□ 1.9
RNF38-208ENST00000488058 CIITAP33076 1130 aa26.92■■□□□ 1.9
RNF38-208ENST00000488058 KCNJ6P48051 423 aa26.92■■□□□ 1.9
RNF38-208ENST00000488058 STAT5BP51692 787 aa26.92■■□□□ 1.9
RNF38-208ENST00000488058 CNKSR3Q6P9H4 555 aa26.92■■□□□ 1.9
RNF38-208ENST00000488058 CDX2Q99626 313 aaPredicted RBP26.92■■□□□ 1.9
RNF38-208ENST00000488058 C22orf23Q9BZE7 217 aa26.92■■□□□ 1.9
RNF38-208ENST00000488058 NKX2-4Q9H2Z4 354 aa26.92■■□□□ 1.9
RNF38-208ENST00000488058 ZNF576Q9H609 170 aa26.92■■□□□ 1.9
RNF38-208ENST00000488058 ORC3Q9UBD5 711 aaPredicted RBP26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms