RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 PCDHA6Q9UN73 950 aa23.21■■□□□ 1.31
TRIM8-204ENST00000487927 PCDHA8Q9Y5H6 950 aa23.21■■□□□ 1.31
TRIM8-204ENST00000487927 COL4A4P53420 1690 aaPredicted RBP23.21■■□□□ 1.31
TRIM8-204ENST00000487927 REV3LO60673 3130 aa23.2■■□□□ 1.3
TRIM8-204ENST00000487927 ABHD14A-ACY1A0A1B0GW23 586 aa23.2■■□□□ 1.3
TRIM8-204ENST00000487927 LCHNA4D1U4 455 aa23.2■■□□□ 1.3
TRIM8-204ENST00000487927 KIF28PB7ZC32 967 aa23.2■■□□□ 1.3
TRIM8-204ENST00000487927 LGR5O75473 907 aa23.2■■□□□ 1.3
TRIM8-204ENST00000487927 ADAM17P78536 824 aa23.2■■□□□ 1.3
TRIM8-204ENST00000487927 RTN1Q16799 776 aa23.2■■□□□ 1.3
TRIM8-204ENST00000487927 FAM217BQ9NTX9 383 aaPredicted RBP23.2■■□□□ 1.3
TRIM8-204ENST00000487927 SIP14410 1827 aa23.19■■□□□ 1.3
TRIM8-204ENST00000487927 SPDYE3A6NKU9 549 aa23.19■■□□□ 1.3
TRIM8-204ENST00000487927 RSPH10B2B2RC85 870 aa23.19■■□□□ 1.3
TRIM8-204ENST00000487927 ZBTB43O43298 467 aa23.19■■□□□ 1.3
TRIM8-204ENST00000487927 TLL1O43897 1013 aa23.19■■□□□ 1.3
TRIM8-204ENST00000487927 RSPH10BP0C881 870 aa23.19■■□□□ 1.3
TRIM8-204ENST00000487927 MKRN4PQ13434 485 aaPredicted RBP23.19■■□□□ 1.3
TRIM8-204ENST00000487927 GIMAP8Q8ND71 665 aaPredicted RBP23.19■■□□□ 1.3
TRIM8-204ENST00000487927 ZNF215Q9UL58 517 aaPredicted RBP23.19■■□□□ 1.3
TRIM8-204ENST00000487927 EMSYQ7Z589 1322 aa23.18■■□□□ 1.3
TRIM8-204ENST00000487927 KLF18A0A0U1RQI7 1052 aa23.18■■□□□ 1.3
TRIM8-204ENST00000487927 GSTTP1A0A1W2PQM5 241 aa23.18■■□□□ 1.3
TRIM8-204ENST00000487927 POU3F3P20264 500 aaPredicted RBP23.18■■□□□ 1.3
TRIM8-204ENST00000487927 TCF7P36402 384 aaPredicted RBP23.18■■□□□ 1.3
TRIM8-204ENST00000487927 MTMR1Q13613 665 aa23.18■■□□□ 1.3
TRIM8-204ENST00000487927 IKBKEQ14164 716 aa23.18■■□□□ 1.3
TRIM8-204ENST00000487927 KRT32Q14532 448 aa23.18■■□□□ 1.3
TRIM8-204ENST00000487927 DBF4BQ8NFT6 615 aa23.18■■□□□ 1.3
TRIM8-204ENST00000487927 CDHR1Q96JP9 859 aa23.18■■□□□ 1.3
TRIM8-204ENST00000487927 OSBPL7Q9BZF2 842 aa23.18■■□□□ 1.3
TRIM8-204ENST00000487927 JADE2Q9NQC1 790 aa23.18■■□□□ 1.3
TRIM8-204ENST00000487927 GOLGA8AA7E2F4 631 aa23.17■■□□□ 1.3
TRIM8-204ENST00000487927 GOLGA8BA8MQT2 603 aa23.17■■□□□ 1.3
TRIM8-204ENST00000487927 EFCAB14O75071 495 aa23.17■■□□□ 1.3
TRIM8-204ENST00000487927 GJB5O95377 273 aa23.17■■□□□ 1.3
TRIM8-204ENST00000487927 CPA1P15085 419 aa23.17■■□□□ 1.3
TRIM8-204ENST00000487927 CDC27P30260 824 aa23.17■■□□□ 1.3
TRIM8-204ENST00000487927 NAPAP54920 295 aa23.17■■□□□ 1.3
TRIM8-204ENST00000487927 TJAP1Q5JTD0 557 aa23.17■■□□□ 1.3
TRIM8-204ENST00000487927 LMBR1Q8WVP7 490 aa23.17■■□□□ 1.3
TRIM8-204ENST00000487927 ARNTL2Q8WYA1 636 aa23.17■■□□□ 1.3
TRIM8-204ENST00000487927 TM6SF1Q9BZW5 370 aa23.17■■□□□ 1.3
TRIM8-204ENST00000487927 RIC8AQ9NPQ8 531 aa23.17■■□□□ 1.3
TRIM8-204ENST00000487927 PKD2L1Q9P0L9 805 aa23.17■■□□□ 1.3
TRIM8-204ENST00000487927 THEGQ9P2T0 379 aa23.17■■□□□ 1.3
TRIM8-204ENST00000487927 MTCH2Q9Y6C9 303 aa23.17■■□□□ 1.3
TRIM8-204ENST00000487927 V9GY48 417 aaPredicted RBP23.17■■□□□ 1.3
TRIM8-204ENST00000487927 STXBP3O00186 592 aa23.16■■□□□ 1.3
TRIM8-204ENST00000487927 CAND2O75155 1236 aa23.16■■□□□ 1.3
TRIM8-204ENST00000487927 PLEKHG4Q58EX7 1191 aa23.16■■□□□ 1.3
TRIM8-204ENST00000487927 PPP1R18Q6NYC8 613 aa23.16■■□□□ 1.3
TRIM8-204ENST00000487927 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.16■■□□□ 1.38e-17■■■■□ 26.7
TRIM8-204ENST00000487927 PGBD1Q96JS3 809 aa23.16■■□□□ 1.3
TRIM8-204ENST00000487927 ZBED2Q9BTP6 218 aa23.16■■□□□ 1.3
TRIM8-204ENST00000487927 HMGB1P09429 215 aaKnown RBP23.15■■□□□ 1.3
TRIM8-204ENST00000487927 CTSHP09668 335 aa23.15■■□□□ 1.3
TRIM8-204ENST00000487927 GNAT1P11488 350 aa23.15■■□□□ 1.3
TRIM8-204ENST00000487927 RCAN1P53805 252 aa23.15■■□□□ 1.3
TRIM8-204ENST00000487927 ARHGAP4P98171 946 aa23.15■■□□□ 1.3
TRIM8-204ENST00000487927 KRT40Q6A162 431 aa23.15■■□□□ 1.3
TRIM8-204ENST00000487927 MICALL1Q8N3F8 863 aa23.15■■□□□ 1.3
TRIM8-204ENST00000487927 ATXN2LQ8WWM7 1075 aaKnown RBP23.15■■□□□ 1.3
TRIM8-204ENST00000487927 SEPT1Q8WYJ6 367 aa23.15■■□□□ 1.3
TRIM8-204ENST00000487927 SYMPKQ92797 1274 aaKnown RBP23.15■■□□□ 1.3
TRIM8-204ENST00000487927 NRCAMQ92823 1304 aa23.14■■□□□ 1.3
TRIM8-204ENST00000487927 hCG_1984214I3L0E3 225 aa23.14■■□□□ 1.29
TRIM8-204ENST00000487927 MAFGO15525 162 aa23.14■■□□□ 1.29
TRIM8-204ENST00000487927 LPXNO60711 386 aa23.14■■□□□ 1.29
TRIM8-204ENST00000487927 ADCY7P51828 1080 aa23.14■■□□□ 1.29
TRIM8-204ENST00000487927 FAM117BQ6P1L5 589 aa23.14■■□□□ 1.29
TRIM8-204ENST00000487927 ZNF713Q8N859 430 aaPredicted RBP23.14■■□□□ 1.29
TRIM8-204ENST00000487927 CYP2W1Q8TAV3 490 aa23.14■■□□□ 1.29
TRIM8-204ENST00000487927 RAD9AQ99638 391 aa23.14■■□□□ 1.29
TRIM8-204ENST00000487927 MXRA8Q9BRK3 442 aa23.14■■□□□ 1.29
TRIM8-204ENST00000487927 ANO3Q9BYT9 981 aa23.14■■□□□ 1.29
TRIM8-204ENST00000487927 EHMT1Q9H9B1 1298 aa23.14■■□□□ 1.29
TRIM8-204ENST00000487927 BARHL2Q9NY43 387 aa23.14■■□□□ 1.29
TRIM8-204ENST00000487927 SNX14Q9Y5W7 946 aa23.14■■□□□ 1.29
TRIM8-204ENST00000487927 NCOR1O75376 2440 aa23.13■■□□□ 1.29
TRIM8-204ENST00000487927 ADD1P35611 737 aaKnown RBP23.13■■□□□ 1.29
TRIM8-204ENST00000487927 CLK2P49760 499 aaKnown RBP23.13■■□□□ 1.29
TRIM8-204ENST00000487927 APOBRQ0VD83 1088 aa23.13■■□□□ 1.29
TRIM8-204ENST00000487927 GRB10Q13322 594 aa23.13■■□□□ 1.29
TRIM8-204ENST00000487927 FAM26DQ5JW98 314 aa23.13■■□□□ 1.29
TRIM8-204ENST00000487927 RUFY4Q6ZNE9 571 aa23.13■■□□□ 1.29
TRIM8-204ENST00000487927 TEX2Q8IWB9 1127 aa23.13■■□□□ 1.29
TRIM8-204ENST00000487927 PCYT2Q99447 389 aa23.13■■□□□ 1.29
TRIM8-204ENST00000487927 KCNH7Q9NS40 1196 aa23.13■■□□□ 1.29
TRIM8-204ENST00000487927 TMEM260Q9NX78 707 aa23.13■■□□□ 1.29
TRIM8-204ENST00000487927 CIZ1Q9ULV3 898 aaPredicted RBP23.13■■□□□ 1.29
TRIM8-204ENST00000487927 LINC01553A4QN01 128 aa23.12■■□□□ 1.29
TRIM8-204ENST00000487927 SMCO2A6NFE2 343 aa23.12■■□□□ 1.29
TRIM8-204ENST00000487927 MARK3P27448 753 aa23.12■■□□□ 1.29
TRIM8-204ENST00000487927 PSMA5P28066 241 aa23.12■■□□□ 1.29
TRIM8-204ENST00000487927 Q6ZUG5 572 aa23.12■■□□□ 1.29
TRIM8-204ENST00000487927 JAKMIP1Q96N16 626 aaKnown RBP23.12■■□□□ 1.29
TRIM8-204ENST00000487927 ASB2Q96Q27 587 aa23.12■■□□□ 1.29
TRIM8-204ENST00000487927 ERAP1Q9NZ08 941 aa23.12■■□□□ 1.29
TRIM8-204ENST00000487927 GTPBP6O43824 516 aaPredicted RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms