RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 DLL4Q9NR61 685 aa6.88□□□□□ -1.31
SMC4-219ENST00000487747 IGSF5Q9NSI5 407 aa6.88□□□□□ -1.31
SMC4-219ENST00000487747 TCRBV5S4A2TA0A5A2 114 aa6.87□□□□□ -1.31
SMC4-219ENST00000487747 CYP7B1O75881 506 aa6.87□□□□□ -1.31
SMC4-219ENST00000487747 KNG1P01042 644 aa6.87□□□□□ -1.31
SMC4-219ENST00000487747 SOD2P04179 222 aa6.87□□□□□ -1.31
SMC4-219ENST00000487747 GPR85P60893 370 aa6.87□□□□□ -1.31
SMC4-219ENST00000487747 PFKPQ01813 784 aa6.87□□□□□ -1.31
SMC4-219ENST00000487747 SURF1Q15526 300 aa6.87□□□□□ -1.31
SMC4-219ENST00000487747 KIZQ2M2Z5 673 aa6.87□□□□□ -1.31
SMC4-219ENST00000487747 CD276Q5ZPR3 534 aa6.87□□□□□ -1.31
SMC4-219ENST00000487747 PLEKHH3Q7Z736 793 aa6.87□□□□□ -1.31
SMC4-219ENST00000487747 STPG3Q8N7X2 389 aa6.87□□□□□ -1.31
SMC4-219ENST00000487747 ST13P5Q8NFI4 369 aaPredicted RBP6.87□□□□□ -1.31
SMC4-219ENST00000487747 DNERQ8NFT8 737 aa6.87□□□□□ -1.31
SMC4-219ENST00000487747 CD244Q9BZW8 370 aa6.87□□□□□ -1.31
SMC4-219ENST00000487747 MEGF9Q9H1U4 602 aa6.87□□□□□ -1.31
SMC4-219ENST00000487747 ZFP69BQ9UJL9 534 aa6.87□□□□□ -1.31
SMC4-219ENST00000487747 ADAM29Q9UKF5 820 aa6.87□□□□□ -1.31
SMC4-219ENST00000487747 DSEQ9UL01 958 aa6.87□□□□□ -1.31
SMC4-219ENST00000487747 CCDC9Q9Y3X0 531 aaKnown RBP6.87□□□□□ -1.31
SMC4-219ENST00000487747 TRAV20A0A0B4J274 112 aa6.86□□□□□ -1.31
SMC4-219ENST00000487747 IQCA1LA6NCM1 817 aa6.86□□□□□ -1.31
SMC4-219ENST00000487747 AKAP8O43823 692 aaKnown RBP6.86□□□□□ -1.31
SMC4-219ENST00000487747 IL18BPO95998 194 aa6.86□□□□□ -1.31
SMC4-219ENST00000487747 RBM25P49756 843 aaKnown RBP6.86□□□□□ -1.31
SMC4-219ENST00000487747 SPIRE1Q08AE8 756 aa6.86□□□□□ -1.31
SMC4-219ENST00000487747 IFRD2Q12894 506 aaPredicted RBP6.86□□□□□ -1.31
SMC4-219ENST00000487747 ARHGEF18Q6ZSZ5 1173 aa6.86□□□□□ -1.31
SMC4-219ENST00000487747 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.86□□□□□ -1.31
SMC4-219ENST00000487747 IFNL3Q8IZI9 196 aa6.86□□□□□ -1.31
SMC4-219ENST00000487747 WRNIP1Q96S55 665 aa6.86□□□□□ -1.31
SMC4-219ENST00000487747 PDGFDQ9GZP0 370 aaPredicted RBP6.86□□□□□ -1.31
SMC4-219ENST00000487747 BARX1Q9HBU1 254 aaPredicted RBP6.86□□□□□ -1.31
SMC4-219ENST00000487747 JADE2Q9NQC1 790 aa6.86□□□□□ -1.31
SMC4-219ENST00000487747 KCND1Q9NSA2 647 aa6.86□□□□□ -1.31
SMC4-219ENST00000487747 EPHA5P54756 1037 aa6.85□□□□□ -1.31
SMC4-219ENST00000487747 SMAD2Q15796 467 aaKnown RBP6.85□□□□□ -1.31
SMC4-219ENST00000487747 FOXB2Q5VYV0 432 aa6.85□□□□□ -1.31
SMC4-219ENST00000487747 ZNF585AQ6P3V2 769 aa6.85□□□□□ -1.31
SMC4-219ENST00000487747 Q6ZUG5 572 aa6.85□□□□□ -1.31
SMC4-219ENST00000487747 KCTD1Q719H9 257 aa6.85□□□□□ -1.31
SMC4-219ENST00000487747 GPR155Q7Z3F1 870 aa6.85□□□□□ -1.31
SMC4-219ENST00000487747 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.85□□□□□ -1.312e-6■■■■■ 54.3
SMC4-219ENST00000487747 SH3RF3Q8TEJ3 882 aaPredicted RBP6.85□□□□□ -1.31
SMC4-219ENST00000487747 ZFYVE21Q9BQ24 234 aa6.85□□□□□ -1.31
SMC4-219ENST00000487747 KLC2Q9H0B6 622 aa6.85□□□□□ -1.31
SMC4-219ENST00000487747 ARHGAP20Q9P2F6 1191 aa6.85□□□□□ -1.31
SMC4-219ENST00000487747 PTPN22Q9Y2R2 807 aa6.85□□□□□ -1.31
SMC4-219ENST00000487747 ZNF839A8K0R7 811 aa6.84□□□□□ -1.31
SMC4-219ENST00000487747 ADCY3O60266 1144 aa6.84□□□□□ -1.31
SMC4-219ENST00000487747 CNOT4O95628 575 aaKnown RBP6.84□□□□□ -1.31
SMC4-219ENST00000487747 CIR1Q86X95 450 aaPredicted RBP6.84□□□□□ -1.31
SMC4-219ENST00000487747 PALM2Q8IXS6 379 aa6.84□□□□□ -1.31
SMC4-219ENST00000487747 GNRHR2Q96P88 292 aa6.84□□□□□ -1.31
SMC4-219ENST00000487747 TACO1Q9BSH4 297 aaKnown RBP6.84□□□□□ -1.31
SMC4-219ENST00000487747 SPATA9Q9BWV2 254 aa6.84□□□□□ -1.31
SMC4-219ENST00000487747 SLC39A2Q9NP94 309 aa6.84□□□□□ -1.31
SMC4-219ENST00000487747 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.83□□□□□ -1.32
SMC4-219ENST00000487747 FAM47E-STBD1D6RA91 191 aa6.83□□□□□ -1.32
SMC4-219ENST00000487747 FBXO21O94952 628 aa6.83□□□□□ -1.32
SMC4-219ENST00000487747 ENO2P09104 434 aaPredicted RBP6.83□□□□□ -1.32
SMC4-219ENST00000487747 SLFN13Q68D06 897 aa6.83□□□□□ -1.32
SMC4-219ENST00000487747 LRRC47Q8N1G4 583 aaKnown RBP6.83□□□□□ -1.32
SMC4-219ENST00000487747 PFDN2Q9UHV9 154 aa6.83□□□□□ -1.32
SMC4-219ENST00000487747 MSRB2Q9Y3D2 182 aa6.83□□□□□ -1.32
SMC4-219ENST00000487747 TSC22D4Q9Y3Q8 395 aa6.83□□□□□ -1.32
SMC4-219ENST00000487747 FAM90A27PA6NNH2 459 aa6.82□□□□□ -1.32
SMC4-219ENST00000487747 PATE3B3GLJ2 98 aa6.82□□□□□ -1.32
SMC4-219ENST00000487747 FSHBP01225 129 aa6.82□□□□□ -1.32
SMC4-219ENST00000487747 CSF2RBP32927 897 aa6.82□□□□□ -1.32
SMC4-219ENST00000487747 R3HDM1Q15032 1099 aaKnown RBP6.82□□□□□ -1.32
SMC4-219ENST00000487747 FAM209AQ5JX71 171 aa6.82□□□□□ -1.32
SMC4-219ENST00000487747 Q8N1X5 172 aa6.82□□□□□ -1.32
SMC4-219ENST00000487747 KISS1RQ969F8 398 aaPredicted RBP6.82□□□□□ -1.32
SMC4-219ENST00000487747 AJUBAQ96IF1 538 aa6.82□□□□□ -1.32
SMC4-219ENST00000487747 TRIM55Q9BYV6 548 aa6.82□□□□□ -1.32
SMC4-219ENST00000487747 PCDHA8Q9Y5H6 950 aa6.82□□□□□ -1.32
SMC4-219ENST00000487747 DIAPH1O60610 1272 aaKnown RBP6.81□□□□□ -1.32
SMC4-219ENST00000487747 C6orf222P0C671 652 aaPredicted RBP6.81□□□□□ -1.32
SMC4-219ENST00000487747 ZNF888P0CJ79 500 aaPredicted RBP6.81□□□□□ -1.32
SMC4-219ENST00000487747 RALYLQ86SE5 291 aaKnown RBP6.81□□□□□ -1.32
SMC4-219ENST00000487747 SLC16A11Q8NCK7 471 aa6.81□□□□□ -1.32
SMC4-219ENST00000487747 ALG1Q9BT22 464 aa6.81□□□□□ -1.32
SMC4-219ENST00000487747 SCAND2PQ9GZW5 306 aaPredicted RBP6.81□□□□□ -1.32
SMC4-219ENST00000487747 CCDC85CA6NKD9 419 aa6.8□□□□□ -1.32
SMC4-219ENST00000487747 PDPK1O15530 556 aa6.8□□□□□ -1.32
SMC4-219ENST00000487747 AMY2AP04746 511 aa6.8□□□□□ -1.32
SMC4-219ENST00000487747 CHGBP05060 677 aa6.8□□□□□ -1.32
SMC4-219ENST00000487747 AMY2BP19961 511 aa6.8□□□□□ -1.32
SMC4-219ENST00000487747 OSTM1Q86WC4 334 aa6.8□□□□□ -1.32
SMC4-219ENST00000487747 PCDH19Q8TAB3 1148 aa6.8□□□□□ -1.32
SMC4-219ENST00000487747 Q8TCH9 128 aa6.8□□□□□ -1.32
SMC4-219ENST00000487747 KATNBL1Q9H079 304 aa6.8□□□□□ -1.32
SMC4-219ENST00000487747 DEF6Q9H4E7 631 aa6.8□□□□□ -1.32
SMC4-219ENST00000487747 MAN2B1O00754 1011 aa6.79□□□□□ -1.32
SMC4-219ENST00000487747 FOXS1O43638 330 aa6.79□□□□□ -1.32
SMC4-219ENST00000487747 ZNF623O75123 536 aa6.79□□□□□ -1.32
SMC4-219ENST00000487747 STK10O94804 968 aaKnown RBP6.79□□□□□ -1.32
SMC4-219ENST00000487747 C6P13671 934 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms