RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 C8orf76Q96K31 380 aa10.61□□□□□ -0.71
LCN2-205ENST00000487719 TRPV6Q9H1D0 765 aa10.61□□□□□ -0.71
LCN2-205ENST00000487719 AGO4Q9HCK5 861 aaKnown RBP10.61□□□□□ -0.71
LCN2-205ENST00000487719 TRMT13Q9NUP7 481 aaKnown RBP10.61□□□□□ -0.71
LCN2-205ENST00000487719 GTF2IRD1Q9UHL9 959 aa10.61□□□□□ -0.71
LCN2-205ENST00000487719 KCNJ14Q9UNX9 436 aa10.61□□□□□ -0.71
LCN2-205ENST00000487719 SAMM50Q9Y512 469 aa10.61□□□□□ -0.71
LCN2-205ENST00000487719 GRIN2DO15399 1336 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 EMSYQ7Z589 1322 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 TET1Q8NFU7 2136 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 GBF1Q92538 1859 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 FAM86B1E9PN63 330 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 DDX39AO00148 427 aaKnown RBP10.6□□□□□ -0.71
LCN2-205ENST00000487719 PITPNM1O00562 1244 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 GAS7O60861 476 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 ATP9AO75110 1047 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 RPLP2P05387 115 aaKnown RBP10.6□□□□□ -0.71
LCN2-205ENST00000487719 PFKMP08237 780 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 FAM86B2P0C5J1 330 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 CIITAP33076 1130 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 RFC2P35250 354 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 SLC26A2P50443 739 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 ACTR2P61160 394 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 LETM2Q2VYF4 491 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 PSRC1Q6PGN9 363 aaPredicted RBP10.6□□□□□ -0.71
LCN2-205ENST00000487719 NEK8Q86SG6 692 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 CYP2W1Q8TAV3 490 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 AFAP1L1Q8TED9 768 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 KAT2BQ92831 832 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 ATP6V0A1Q93050 837 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 AIFM3Q96NN9 605 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 TEKT3Q9BXF9 490 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 BACH2Q9BYV9 841 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 HDAC6Q9UBN7 1215 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 TRPC6Q9Y210 931 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 RANBP2P49792 3224 aaKnown RBP10.6□□□□□ -0.71
LCN2-205ENST00000487719 MICAL3Q7RTP6 2002 aa10.6□□□□□ -0.71
LCN2-205ENST00000487719 NRCAMQ92823 1304 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 HAS3O00219 553 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 BAG4O95429 457 aaKnown RBP10.59□□□□□ -0.71
LCN2-205ENST00000487719 CTDNEP1O95476 244 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 MMP1P03956 469 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 PSAPP07602 524 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 SMIM10L2AP0DMW4 78 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 SMIM10L2BP0DMW5 78 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 ARP10275 920 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 ACTN1P12814 892 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 SFNP31947 248 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 CYP2C18P33260 490 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 STAT5BP51692 787 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 PTK7Q13308 1070 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 INF2Q27J81 1249 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 LRCH2Q5VUJ6 765 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 ZNF746Q6NUN9 644 aaPredicted RBP10.59□□□□□ -0.71
LCN2-205ENST00000487719 PIK3AP1Q6ZUJ8 805 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 RSPH3Q86UC2 560 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 CKAP2LQ8IYA6 745 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 CRYGNQ8WXF5 182 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 RNPC3Q96LT9 517 aaKnown RBP10.59□□□□□ -0.71
LCN2-205ENST00000487719 RIT2Q99578 217 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 KIF2CQ99661 725 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 C16orf70Q9BSU1 422 aa10.59□□□□□ -0.71
LCN2-205ENST00000487719 NOC4LQ9BVI4 516 aaKnown RBP10.59□□□□□ -0.71
LCN2-205ENST00000487719 DDX25Q9UHL0 483 aaKnown RBP10.59□□□□□ -0.71
LCN2-205ENST00000487719 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.59□□□□□ -0.71
LCN2-205ENST00000487719 IGLV3-22A0A075B6J6 115 aa10.58□□□□□ -0.72
LCN2-205ENST00000487719 RRN3P2A6NIE6 340 aa10.58□□□□□ -0.72
LCN2-205ENST00000487719 WDR64B1ANS9 1081 aa10.58□□□□□ -0.72
LCN2-205ENST00000487719 CCNT1O60563 726 aaKnown RBP10.58□□□□□ -0.72
LCN2-205ENST00000487719 JAK2O60674 1132 aa10.58□□□□□ -0.72
LCN2-205ENST00000487719 CYP2C9P11712 490 aa10.58□□□□□ -0.72
LCN2-205ENST00000487719 JAK3P52333 1124 aa10.58□□□□□ -0.72
LCN2-205ENST00000487719 FOSBP53539 338 aa10.58□□□□□ -0.72
LCN2-205ENST00000487719 PPFIA1Q13136 1202 aa10.58□□□□□ -0.72
LCN2-205ENST00000487719 ITGB3BPQ13352 177 aaPredicted RBP10.58□□□□□ -0.72
LCN2-205ENST00000487719 Q4G0T1 1027 aa10.58□□□□□ -0.72
LCN2-205ENST00000487719 KRT40Q6A162 431 aa10.58□□□□□ -0.72
LCN2-205ENST00000487719 GDF6Q6KF10 455 aaPredicted RBP10.58□□□□□ -0.72
LCN2-205ENST00000487719 PLPPR4Q7Z2D5 763 aa10.58□□□□□ -0.72
LCN2-205ENST00000487719 TRIM50Q86XT4 487 aa10.58□□□□□ -0.72
LCN2-205ENST00000487719 DIS3L2Q8IYB7 885 aaKnown RBP10.58□□□□□ -0.72
LCN2-205ENST00000487719 FAM167AQ96KS9 214 aa10.58□□□□□ -0.72
LCN2-205ENST00000487719 FTOQ9C0B1 505 aaKnown RBP eCLIP10.58□□□□□ -0.72
LCN2-205ENST00000487719 IL23AQ9NPF7 189 aa10.58□□□□□ -0.72
LCN2-205ENST00000487719 ZNF302Q9NR11 478 aa10.58□□□□□ -0.72
LCN2-205ENST00000487719 NOL7Q9UMY1 257 aaKnown RBP10.58□□□□□ -0.72
LCN2-205ENST00000487719 PCDHA10Q9Y5I2 948 aa10.58□□□□□ -0.72
LCN2-205ENST00000487719 CYP3A7-CYP3A51PA0A087WV96 503 aa10.57□□□□□ -0.72
LCN2-205ENST00000487719 GSTTP1A0A1W2PQM5 241 aa10.57□□□□□ -0.72
LCN2-205ENST00000487719 H3BQV1 296 aa10.57□□□□□ -0.72
LCN2-205ENST00000487719 M0QZ92 97 aa10.57□□□□□ -0.72
LCN2-205ENST00000487719 M0R2N6 131 aa10.57□□□□□ -0.72
LCN2-205ENST00000487719 DKC1O60832 514 aaKnown RBP eCLIP10.57□□□□□ -0.72
LCN2-205ENST00000487719 CAND2O75155 1236 aa10.57□□□□□ -0.72
LCN2-205ENST00000487719 LGR5O75473 907 aa10.57□□□□□ -0.72
LCN2-205ENST00000487719 FDPSP14324 419 aaKnown RBP10.57□□□□□ -0.72
LCN2-205ENST00000487719 CSF2RAP15509 400 aa10.57□□□□□ -0.72
LCN2-205ENST00000487719 SELPP16109 830 aa10.57□□□□□ -0.72
LCN2-205ENST00000487719 CYP3A7P24462 503 aa10.57□□□□□ -0.72
LCN2-205ENST00000487719 MARK3P27448 753 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms