RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 ZNF449Q6P9G9 518 aa16.6■□□□□ 0.25
HLA-DQB1-209ENST00000487676 ATG9AQ7Z3C6 839 aa16.6■□□□□ 0.25
HLA-DQB1-209ENST00000487676 NUDCD1Q96RS6 583 aa16.6■□□□□ 0.25
HLA-DQB1-209ENST00000487676 PODXLO00592 558 aa16.6■□□□□ 0.25
HLA-DQB1-209ENST00000487676 AGTP01019 485 aa16.6■□□□□ 0.25
HLA-DQB1-209ENST00000487676 EEF2P13639 858 aaKnown RBP16.6■□□□□ 0.25
HLA-DQB1-209ENST00000487676 CDK17Q00537 523 aa16.6■□□□□ 0.25
HLA-DQB1-209ENST00000487676 PSMD2Q13200 908 aa16.6■□□□□ 0.25
HLA-DQB1-209ENST00000487676 OTUD6AQ7L8S5 288 aa16.6■□□□□ 0.25
HLA-DQB1-209ENST00000487676 APLFQ8IW19 511 aaPredicted RBP16.6■□□□□ 0.25
HLA-DQB1-209ENST00000487676 STAMBPL1Q96FJ0 436 aa16.6■□□□□ 0.25
HLA-DQB1-209ENST00000487676 FGD4Q96M96 766 aa16.6■□□□□ 0.25
HLA-DQB1-209ENST00000487676 DENND2AQ9ULE3 1009 aa16.6■□□□□ 0.25
HLA-DQB1-209ENST00000487676 C15orf41Q9Y2V0 281 aa16.6■□□□□ 0.25
HLA-DQB1-209ENST00000487676 KCNA6P17658 529 aa16.6■□□□□ 0.25
HLA-DQB1-209ENST00000487676 RFX5P48382 616 aaPredicted RBP16.6■□□□□ 0.25
HLA-DQB1-209ENST00000487676 ANKRD40Q6AI12 368 aa16.6■□□□□ 0.25
HLA-DQB1-209ENST00000487676 CFAP61Q8NHU2 1237 aa16.6■□□□□ 0.25
HLA-DQB1-209ENST00000487676 DTNBP1Q96EV8 351 aa16.6■□□□□ 0.25
HLA-DQB1-209ENST00000487676 ERGIC2Q96RQ1 377 aa16.6■□□□□ 0.25
HLA-DQB1-209ENST00000487676 FAM205CA6NFA0 338 aa16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 BAG2O95816 211 aa16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 GJC1P36383 396 aa16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 TOB1P50616 345 aaPredicted RBP16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 ITIH4Q14624 930 aa16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 ZC3H18Q86VM9 953 aaKnown RBP16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 ZBTB38Q8NAP3 1195 aaPredicted RBP16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 USP38Q8NB14 1042 aa16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 TUBB6Q9BUF5 446 aa16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 CEBPAP49715 358 aaPredicted RBP16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 TFAP4Q01664 338 aa16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 USH1CQ9Y6N9 552 aa16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 OVOS2A0A0J9YW53 1432 aa16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 OVOS2Q6IE36 1432 aa16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 LRRC10BA6NIK2 292 aa16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 PDE2AO00408 941 aaPredicted RBP16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 GLI1P08151 1106 aa16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 BCRP11274 1271 aa16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 MRPL12P52815 198 aaKnown RBP16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 CREG2Q8IUH2 290 aa16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 ARHGAP18Q8N392 663 aa16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 PDCD7Q8N8D1 485 aaKnown RBP16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 PNMA1Q8ND90 353 aa16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 GRK7Q8WTQ7 553 aa16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 SERPINA10Q9UK55 444 aa16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 TMEM2Q9UHN6 1383 aa16.59■□□□□ 0.25
HLA-DQB1-209ENST00000487676 IGF2BP3O00425 579 aaKnown RBP eCLIP16.58■□□□□ 0.25
HLA-DQB1-209ENST00000487676 RHOBTB3O94955 611 aa16.58■□□□□ 0.25
HLA-DQB1-209ENST00000487676 NQO1P15559 274 aaKnown RBP16.58■□□□□ 0.25
HLA-DQB1-209ENST00000487676 ADCY8P40145 1251 aa16.58■□□□□ 0.25
HLA-DQB1-209ENST00000487676 CTSWP56202 376 aa16.58■□□□□ 0.25
HLA-DQB1-209ENST00000487676 TMTC3Q6ZXV5 915 aa16.58■□□□□ 0.25
HLA-DQB1-209ENST00000487676 SPDYE1Q8NFV5 336 aaPredicted RBP16.58■□□□□ 0.25
HLA-DQB1-209ENST00000487676 PRMT1Q99873 361 aaKnown RBP16.58■□□□□ 0.25
HLA-DQB1-209ENST00000487676 CTCFP49711 727 aaPredicted RBP16.58■□□□□ 0.25
HLA-DQB1-209ENST00000487676 SPATA21Q7Z572 469 aa16.58■□□□□ 0.25
HLA-DQB1-209ENST00000487676 GGT7Q9UJ14 662 aa16.58■□□□□ 0.25
HLA-DQB1-209ENST00000487676 PCDHB13Q9Y5F0 798 aa16.58■□□□□ 0.25
HLA-DQB1-209ENST00000487676 FAM187AA6NFU0 413 aa16.58■□□□□ 0.24
HLA-DQB1-209ENST00000487676 LCORLQ8N3X6 602 aa16.58■□□□□ 0.24
HLA-DQB1-209ENST00000487676 CENPKQ9BS16 269 aa16.58■□□□□ 0.24
HLA-DQB1-209ENST00000487676 ZFATQ9P243 1243 aa16.58■□□□□ 0.24
HLA-DQB1-209ENST00000487676 PTPN22Q9Y2R2 807 aa16.58■□□□□ 0.24
HLA-DQB1-209ENST00000487676 KDM3AQ9Y4C1 1321 aa16.58■□□□□ 0.24
HLA-DQB1-209ENST00000487676 ORC4O43929 436 aa16.58■□□□□ 0.24
HLA-DQB1-209ENST00000487676 DNAJC8O75937 253 aaPredicted RBP16.58■□□□□ 0.24
HLA-DQB1-209ENST00000487676 MSH2P43246 934 aa16.58■□□□□ 0.24
HLA-DQB1-209ENST00000487676 MKRN3Q13064 507 aaKnown RBP16.58■□□□□ 0.24
HLA-DQB1-209ENST00000487676 FIGNQ5HY92 759 aa16.58■□□□□ 0.24
HLA-DQB1-209ENST00000487676 TMC4Q7Z404 712 aa16.58■□□□□ 0.24
HLA-DQB1-209ENST00000487676 GRAMD1AQ96CP6 724 aa16.58■□□□□ 0.24
HLA-DQB1-209ENST00000487676 STAMBPO95630 424 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 HSPA9P38646 679 aaKnown RBP16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 GSTO1P78417 241 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 UNC13DQ70J99 1090 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 PROM2Q8N271 834 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 LRRC37BQ96QE4 947 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 IRX4P78413 519 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 ADCY1Q08828 1119 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 ARHGAP44Q17R89 818 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 GPBP1Q86WP2 473 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 DDX42Q86XP3 938 aaKnown RBP eCLIP16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 HSD3B7Q9H2F3 369 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 C21orf2O43822 256 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 SEPT6Q14141 434 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 SLC18A3Q16572 532 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 BBOF1Q8ND07 529 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 MDM1Q8TC05 714 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 TEKT4Q8WW24 435 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 VPS37BQ9H9H4 285 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 SENP2Q9HC62 589 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 ATF2P15336 505 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 NR2F2P24468 414 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 AEBP2Q6ZN18 517 aaPredicted RBP16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 GIMAP8Q8ND71 665 aaPredicted RBP16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 CCDC110Q8TBZ0 833 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 PPP1R9AQ9ULJ8 1098 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 LEMD3Q9Y2U8 911 aa16.57■□□□□ 0.24
HLA-DQB1-209ENST00000487676 TRAPPC3O43617 180 aa16.56■□□□□ 0.24
HLA-DQB1-209ENST00000487676 ECEL1O95672 775 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms