RNA–Protein interactions for RNA: ENST00000487596.1

RAD50-207, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 3

Gene RAD50, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-207ENST00000487596 FAM209AQ5JX71 171 aa6.91□□□□□ -1.3
RAD50-207ENST00000487596 FOXB2Q5VYV0 432 aa6.91□□□□□ -1.3
RAD50-207ENST00000487596 CPZQ66K79 652 aa6.91□□□□□ -1.3
RAD50-207ENST00000487596 GLB1LQ6UWU2 654 aa6.91□□□□□ -1.3
RAD50-207ENST00000487596 STK32CQ86UX6 486 aa6.91□□□□□ -1.3
RAD50-207ENST00000487596 KISS1RQ969F8 398 aaPredicted RBP6.91□□□□□ -1.3
RAD50-207ENST00000487596 EXOC2Q96KP1 924 aa6.91□□□□□ -1.3
RAD50-207ENST00000487596 RNPC3Q96LT9 517 aaKnown RBP6.91□□□□□ -1.3
RAD50-207ENST00000487596 YTHDC1Q96MU7 727 aaKnown RBP6.91□□□□□ -1.3
RAD50-207ENST00000487596 MRPS23Q9Y3D9 190 aaKnown RBP6.91□□□□□ -1.3
RAD50-207ENST00000487596 PTCH2Q9Y6C5 1203 aa6.91□□□□□ -1.3
RAD50-207ENST00000487596 TLDC2A0PJX2 215 aa6.9□□□□□ -1.3
RAD50-207ENST00000487596 SPIRE1Q08AE8 756 aa6.9□□□□□ -1.3
RAD50-207ENST00000487596 PKN3Q6P5Z2 889 aa6.9□□□□□ -1.3
RAD50-207ENST00000487596 USP53Q70EK8 1073 aa6.9□□□□□ -1.3
RAD50-207ENST00000487596 SYNPOQ8N3V7 929 aa6.9□□□□□ -1.3
RAD50-207ENST00000487596 PHF20Q9BVI0 1012 aa6.9□□□□□ -1.3
RAD50-207ENST00000487596 TMEM260Q9NX78 707 aa6.9□□□□□ -1.3
RAD50-207ENST00000487596 ZNF536O15090 1300 aa6.9□□□□□ -1.3
RAD50-207ENST00000487596 LAMTOR5O43504 91 aa6.89□□□□□ -1.31
RAD50-207ENST00000487596 SQSTM1Q13501 440 aa6.89□□□□□ -1.31
RAD50-207ENST00000487596 STYK1Q6J9G0 422 aa6.89□□□□□ -1.31
RAD50-207ENST00000487596 LBX2Q6XYB7 198 aa6.89□□□□□ -1.31
RAD50-207ENST00000487596 OTOP3Q7RTS5 596 aa6.89□□□□□ -1.31
RAD50-207ENST00000487596 MAMDC2Q7Z304 686 aaPredicted RBP6.89□□□□□ -1.31
RAD50-207ENST00000487596 KLHL36Q8N4N3 616 aa6.89□□□□□ -1.31
RAD50-207ENST00000487596 LOXL4Q96JB6 756 aa6.89□□□□□ -1.31
RAD50-207ENST00000487596 FTSJ1Q9UET6 329 aa6.89□□□□□ -1.31
RAD50-207ENST00000487596 TMA7Q9Y2S6 64 aaKnown RBP6.89□□□□□ -1.31
RAD50-207ENST00000487596 INSRRP14616 1297 aa6.88□□□□□ -1.31
RAD50-207ENST00000487596 GPR85P60893 370 aa6.88□□□□□ -1.31
RAD50-207ENST00000487596 GABREP78334 506 aa6.88□□□□□ -1.31
RAD50-207ENST00000487596 NTRK3Q16288 839 aa6.88□□□□□ -1.31
RAD50-207ENST00000487596 JAZF1Q86VZ6 243 aa6.88□□□□□ -1.31
RAD50-207ENST00000487596 HOMER1Q86YM7 354 aa6.88□□□□□ -1.31
RAD50-207ENST00000487596 CHST13Q8NET6 341 aa6.88□□□□□ -1.31
RAD50-207ENST00000487596 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.88□□□□□ -1.31
RAD50-207ENST00000487596 PIP4K2CQ8TBX8 421 aa6.88□□□□□ -1.31
RAD50-207ENST00000487596 PTPRN2Q92932 1015 aa6.88□□□□□ -1.31
RAD50-207ENST00000487596 DLL4Q9NR61 685 aa6.88□□□□□ -1.31
RAD50-207ENST00000487596 TBX22Q9Y458 520 aa6.88□□□□□ -1.31
RAD50-207ENST00000487596 MRPL42Q9Y6G3 142 aaKnown RBP6.88□□□□□ -1.31
RAD50-207ENST00000487596 B4GALT3O60512 393 aa6.87□□□□□ -1.31
RAD50-207ENST00000487596 GRK2P25098 689 aa6.87□□□□□ -1.31
RAD50-207ENST00000487596 GRK3P35626 688 aa6.87□□□□□ -1.31
RAD50-207ENST00000487596 MLLT6P55198 1093 aaPredicted RBP6.87□□□□□ -1.31
RAD50-207ENST00000487596 VASNQ6EMK4 673 aa6.87□□□□□ -1.31
RAD50-207ENST00000487596 GIMAP6Q6P9H5 292 aa6.87□□□□□ -1.31
RAD50-207ENST00000487596 IFNL3Q8IZI9 196 aa6.87□□□□□ -1.31
RAD50-207ENST00000487596 UHMK1Q8TAS1 419 aaKnown RBP6.87□□□□□ -1.31
RAD50-207ENST00000487596 APPBP2Q92624 585 aa6.87□□□□□ -1.31
RAD50-207ENST00000487596 DVL3Q92997 716 aaPredicted RBP6.87□□□□□ -1.31
RAD50-207ENST00000487596 MBD6Q96DN6 1003 aa6.87□□□□□ -1.31
RAD50-207ENST00000487596 SSBP3Q9BWW4 388 aaPredicted RBP6.87□□□□□ -1.31
RAD50-207ENST00000487596 JAM3Q9BX67 310 aa6.87□□□□□ -1.31
RAD50-207ENST00000487596 MRPL4Q9BYD3 311 aaKnown RBP6.87□□□□□ -1.31
RAD50-207ENST00000487596 BARX1Q9HBU1 254 aaPredicted RBP6.87□□□□□ -1.31
RAD50-207ENST00000487596 CROTQ9UKG9 612 aa6.87□□□□□ -1.31
RAD50-207ENST00000487596 AQP7O14520 342 aa6.86□□□□□ -1.31
RAD50-207ENST00000487596 EFCAB14O75071 495 aa6.86□□□□□ -1.31
RAD50-207ENST00000487596 C6orf222P0C671 652 aaPredicted RBP6.86□□□□□ -1.31
RAD50-207ENST00000487596 NAT1P18440 290 aa6.86□□□□□ -1.31
RAD50-207ENST00000487596 EPHB4P54760 987 aa6.86□□□□□ -1.31
RAD50-207ENST00000487596 PUM1Q14671 1186 aaKnown RBP eCLIP6.86□□□□□ -1.31
RAD50-207ENST00000487596 DTX3Q8N9I9 347 aa6.86□□□□□ -1.31
RAD50-207ENST00000487596 ZCCHC14Q8WYQ9 949 aaKnown RBP6.86□□□□□ -1.31
RAD50-207ENST00000487596 KANSL2Q9H9L4 492 aa6.86□□□□□ -1.31
RAD50-207ENST00000487596 ESYT3A0FGR9 886 aa6.85□□□□□ -1.31
RAD50-207ENST00000487596 BLACEA4D250 179 aa6.85□□□□□ -1.31
RAD50-207ENST00000487596 ENPP3O14638 875 aa6.85□□□□□ -1.31
RAD50-207ENST00000487596 PLD2O14939 933 aa6.85□□□□□ -1.31
RAD50-207ENST00000487596 SLC27A2O14975 620 aa6.85□□□□□ -1.31
RAD50-207ENST00000487596 KCNQ2O43526 872 aa6.85□□□□□ -1.31
RAD50-207ENST00000487596 MSCO60682 206 aa6.85□□□□□ -1.31
RAD50-207ENST00000487596 GNAT1P11488 350 aa6.85□□□□□ -1.31
RAD50-207ENST00000487596 PPP2CBP62714 309 aa6.85□□□□□ -1.31
RAD50-207ENST00000487596 PPP2CAP67775 309 aa6.85□□□□□ -1.31
RAD50-207ENST00000487596 TRIM61Q5EBN2 209 aa6.85□□□□□ -1.31
RAD50-207ENST00000487596 HABP4Q5JVS0 413 aaKnown RBP6.85□□□□□ -1.31
RAD50-207ENST00000487596 TRMT10BQ6PF06 316 aaKnown RBP6.85□□□□□ -1.31
RAD50-207ENST00000487596 ARHGEF18Q6ZSZ5 1173 aa6.85□□□□□ -1.31
RAD50-207ENST00000487596 ZSWIM3Q96MP5 696 aa6.85□□□□□ -1.31
RAD50-207ENST00000487596 C8orf49Q96NF6 230 aa6.85□□□□□ -1.31
RAD50-207ENST00000487596 CDK5RAP1Q96SZ6 601 aaKnown RBP6.85□□□□□ -1.31
RAD50-207ENST00000487596 NCOA5Q9HCD5 579 aaKnown RBP6.85□□□□□ -1.31
RAD50-207ENST00000487596 NPEPPSL1A6NEC2 478 aa6.84□□□□□ -1.31
RAD50-207ENST00000487596 FAM47E-STBD1D6RA91 191 aa6.84□□□□□ -1.31
RAD50-207ENST00000487596 APPP05067 770 aa6.84□□□□□ -1.31
RAD50-207ENST00000487596 FAHP16930 419 aa6.84□□□□□ -1.31
RAD50-207ENST00000487596 ZNF20P17024 532 aa6.84□□□□□ -1.31
RAD50-207ENST00000487596 EPHA5P54756 1037 aa6.84□□□□□ -1.31
RAD50-207ENST00000487596 NFATC3Q12968 1075 aa6.84□□□□□ -1.31
RAD50-207ENST00000487596 TUSC3Q13454 348 aa6.84□□□□□ -1.31
RAD50-207ENST00000487596 TCEA2Q15560 299 aa6.84□□□□□ -1.31
RAD50-207ENST00000487596 SMAD2Q15796 467 aaKnown RBP6.84□□□□□ -1.31
RAD50-207ENST00000487596 FNDC3BQ53EP0 1204 aaKnown RBP6.84□□□□□ -1.31
RAD50-207ENST00000487596 SLFN13Q68D06 897 aa6.84□□□□□ -1.31
RAD50-207ENST00000487596 KCNT2Q6UVM3 1135 aa6.84□□□□□ -1.31
RAD50-207ENST00000487596 TMC5Q6UXY8 1006 aa6.84□□□□□ -1.31
RAD50-207ENST00000487596 C16orf86Q6ZW13 317 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms