RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 TRIM58Q8NG06 486 aa18.72■□□□□ 0.59
FDPS-212ENST00000487002 GMLQ99445 158 aa18.72■□□□□ 0.59
FDPS-212ENST00000487002 IFIH1Q9BYX4 1025 aaKnown RBP18.72■□□□□ 0.59
FDPS-212ENST00000487002 ZNF70Q9UC06 446 aaPredicted RBP18.72■□□□□ 0.59
FDPS-212ENST00000487002 ZBTB21Q9ULJ3 1066 aa18.72■□□□□ 0.59
FDPS-212ENST00000487002 TRAF3IP3Q9Y228 551 aa18.72■□□□□ 0.59
FDPS-212ENST00000487002 NPHP3-ACAD11A0A0J9YXS1 232 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 TBC1D12O60347 775 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 ATP1A1P05023 1023 aaKnown RBP18.71■□□□□ 0.59
FDPS-212ENST00000487002 VIL1P09327 827 aaKnown RBP18.71■□□□□ 0.59
FDPS-212ENST00000487002 DLGAP5Q15398 846 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 SPDYE2Q495Y8 402 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 EPM2AIP1Q7L775 607 aaPredicted RBP18.71■□□□□ 0.59
FDPS-212ENST00000487002 UBXN6Q9BZV1 441 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 GBP3Q9H0R5 595 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 RANBP17Q9H2T7 1088 aaKnown RBP18.71■□□□□ 0.59
FDPS-212ENST00000487002 DEF6Q9H4E7 631 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 SH2D4AQ9H788 454 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 TBC1D7Q9P0N9 293 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 PCDHA13Q9Y5I0 950 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.71■□□□□ 0.59
FDPS-212ENST00000487002 CNTNAP1P78357 1384 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 IGLV3-22A0A075B6J6 115 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 TCP10L2B9ZVM9 353 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 CETN3O15182 167 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 PJA2O43164 708 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 C21orf2O43822 256 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 PLEKP08567 350 aaPredicted RBP18.71■□□□□ 0.59
FDPS-212ENST00000487002 ZNF76P36508 570 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 EIF4A3P38919 411 aaKnown RBP18.71■□□□□ 0.59
FDPS-212ENST00000487002 BMT2Q1RMZ1 405 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 CHURC1Q8WUH1 139 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 REEP2Q9BRK0 252 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 VPS33BQ9H267 617 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 EHMT1Q9H9B1 1298 aa18.71■□□□□ 0.59
FDPS-212ENST00000487002 AKR1B10O60218 316 aa18.7■□□□□ 0.58
FDPS-212ENST00000487002 EYA4O95677 639 aa18.7■□□□□ 0.58
FDPS-212ENST00000487002 HOXA13P31271 388 aaPredicted RBP18.7■□□□□ 0.58
FDPS-212ENST00000487002 ECE1P42892 770 aa18.7■□□□□ 0.58
FDPS-212ENST00000487002 CYP27A1Q02318 531 aa18.7■□□□□ 0.58
FDPS-212ENST00000487002 LONRF2Q1L5Z9 754 aa18.7■□□□□ 0.58
FDPS-212ENST00000487002 NELFCDQ8IXH7 590 aa18.7■□□□□ 0.58
FDPS-212ENST00000487002 SPICE1Q8N0Z3 855 aa18.7■□□□□ 0.58
FDPS-212ENST00000487002 MSL3Q8N5Y2 521 aaKnown RBP18.7■□□□□ 0.58
FDPS-212ENST00000487002 FUT8Q9BYC5 575 aa18.7■□□□□ 0.58
FDPS-212ENST00000487002 TUFT1Q9NNX1 390 aa18.7■□□□□ 0.58
FDPS-212ENST00000487002 RBAK-RBAKDNI3L0D1 243 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 TACC1O75410 805 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 MUTP22033 750 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 CACNB1Q02641 598 aaPredicted RBP18.69■□□□□ 0.58
FDPS-212ENST00000487002 PABPC4Q13310 644 aaKnown RBP eCLIP18.69■□□□□ 0.58
FDPS-212ENST00000487002 ADAM9Q13443 819 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 ASTE1Q2TB18 679 aaPredicted RBP18.69■□□□□ 0.58
FDPS-212ENST00000487002 FAM160B2Q86V87 743 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 OGFOD1Q8N543 542 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 TTLL6Q8N841 843 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 MTMR14Q8NCE2 650 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 UIMC1Q96RL1 719 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 TFR2Q9UP52 801 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 GCOM1H8Y6P7 765 aaPredicted RBP18.69■□□□□ 0.58
FDPS-212ENST00000487002 PDXKO00764 312 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 ENC1O14682 589 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 SASH3O75995 380 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 POLR2MP0CAP2 368 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 GAP43P17677 238 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 PSMC6P62333 389 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 TERF2Q15554 542 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 KNOP1Q1ED39 458 aaKnown RBP18.69■□□□□ 0.58
FDPS-212ENST00000487002 FAM83BQ5T0W9 1011 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 WDR93Q6P2C0 686 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 FRMD5Q7Z6J6 570 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 SMCR8Q8TEV9 937 aaPredicted RBP18.69■□□□□ 0.58
FDPS-212ENST00000487002 PNKPQ96T60 521 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 EIF2AK1Q9BQI3 630 aaKnown RBP18.69■□□□□ 0.58
FDPS-212ENST00000487002 VCPKMTQ9H867 229 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 JRKLQ9Y4A0 524 aa18.69■□□□□ 0.58
FDPS-212ENST00000487002 SMCHD1A6NHR9 2005 aa18.68■□□□□ 0.58
FDPS-212ENST00000487002 CALUO43852 315 aaPredicted RBP18.68■□□□□ 0.58
FDPS-212ENST00000487002 NOL4O94818 638 aa18.68■□□□□ 0.58
FDPS-212ENST00000487002 MCM3P25205 808 aa18.68■□□□□ 0.58
FDPS-212ENST00000487002 PPP2R5CQ13362 524 aa18.68■□□□□ 0.58
FDPS-212ENST00000487002 SLC9C1Q4G0N8 1177 aa18.68■□□□□ 0.58
FDPS-212ENST00000487002 HGSNATQ68CP4 663 aa18.68■□□□□ 0.58
FDPS-212ENST00000487002 KRT26Q7Z3Y9 468 aa18.68■□□□□ 0.58
FDPS-212ENST00000487002 FAM83AQ86UY5 434 aa18.68■□□□□ 0.58
FDPS-212ENST00000487002 SFR1Q86XK3 245 aa18.68■□□□□ 0.58
FDPS-212ENST00000487002 ACER1Q8TDN7 264 aa18.68■□□□□ 0.58
FDPS-212ENST00000487002 LSM14BQ9BX40 385 aaKnown RBP18.68■□□□□ 0.58
FDPS-212ENST00000487002 OLFML3Q9NRN5 406 aa18.68■□□□□ 0.58
FDPS-212ENST00000487002 HDAC6Q9UBN7 1215 aa18.68■□□□□ 0.58
FDPS-212ENST00000487002 MRPL11Q9Y3B7 192 aaKnown RBP18.68■□□□□ 0.58
FDPS-212ENST00000487002 RABGAP1Q9Y3P9 1069 aa18.68■□□□□ 0.58
FDPS-212ENST00000487002 COL4A5P29400 1685 aa18.68■□□□□ 0.58
FDPS-212ENST00000487002 CLRN2A0PK11 232 aa18.67■□□□□ 0.58
FDPS-212ENST00000487002 MACROD2A1Z1Q3 448 aa18.67■□□□□ 0.58
FDPS-212ENST00000487002 MEIS1O00470 390 aa18.67■□□□□ 0.58
FDPS-212ENST00000487002 MAP2K7O14733 419 aa18.67■□□□□ 0.58
FDPS-212ENST00000487002 TBCAO75347 108 aaKnown RBP18.67■□□□□ 0.58
FDPS-212ENST00000487002 TFRCP02786 760 aaKnown RBP18.67■□□□□ 0.58
FDPS-212ENST00000487002 SERPING1P05155 500 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms