RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 ZFYVE9O95405 1425 aa6.03□□□□□ -1.44
SNRNP40-205ENST00000486941 NCOA3Q9Y6Q9 1424 aa6.03□□□□□ -1.44
SNRNP40-205ENST00000486941 ANKRD34BA5PLL1 514 aa6.03□□□□□ -1.44
SNRNP40-205ENST00000486941 NPHS1O60500 1241 aa6.03□□□□□ -1.44
SNRNP40-205ENST00000486941 ZBTB7AO95365 584 aa6.03□□□□□ -1.44
SNRNP40-205ENST00000486941 THBS2P35442 1172 aa6.03□□□□□ -1.44
SNRNP40-205ENST00000486941 MAGEA10P43363 369 aaPredicted RBP6.03□□□□□ -1.44
SNRNP40-205ENST00000486941 GTF2IRD2BQ6EKJ0 949 aa6.03□□□□□ -1.44
SNRNP40-205ENST00000486941 GTF2IRD2Q86UP8 949 aa6.03□□□□□ -1.44
SNRNP40-205ENST00000486941 CABP7Q86V35 215 aa6.03□□□□□ -1.44
SNRNP40-205ENST00000486941 MIB1Q86YT6 1006 aa6.03□□□□□ -1.44
SNRNP40-205ENST00000486941 MARCH2Q9P0N8 246 aa6.03□□□□□ -1.44
SNRNP40-205ENST00000486941 NTMQ9P121 344 aa6.03□□□□□ -1.44
SNRNP40-205ENST00000486941 KIAA1522Q9P206 1035 aaPredicted RBP6.03□□□□□ -1.44
SNRNP40-205ENST00000486941 TBX22Q9Y458 520 aa6.03□□□□□ -1.44
SNRNP40-205ENST00000486941 GCC2Q8IWJ2 1684 aa6.03□□□□□ -1.44
SNRNP40-205ENST00000486941 PLEKHG1Q9ULL1 1385 aa6.03□□□□□ -1.44
SNRNP40-205ENST00000486941 TMEM131LA2VDJ0 1609 aa6.03□□□□□ -1.44
SNRNP40-205ENST00000486941 RIMS2Q9UQ26 1411 aa6.02□□□□□ -1.45
SNRNP40-205ENST00000486941 FPR2P25090 351 aa6.02□□□□□ -1.45
SNRNP40-205ENST00000486941 ADAM17P78536 824 aa6.02□□□□□ -1.45
SNRNP40-205ENST00000486941 FAM50AQ14320 339 aaKnown RBP6.02□□□□□ -1.45
SNRNP40-205ENST00000486941 PUM1Q14671 1186 aaKnown RBP eCLIP6.02□□□□□ -1.45
SNRNP40-205ENST00000486941 TBC1D10BQ4KMP7 808 aaPredicted RBP6.02□□□□□ -1.45
SNRNP40-205ENST00000486941 ERICH6BQ5W0A0 696 aa6.02□□□□□ -1.45
SNRNP40-205ENST00000486941 NLRP10Q86W26 655 aa6.02□□□□□ -1.45
SNRNP40-205ENST00000486941 TRIM59Q8IWR1 403 aa6.02□□□□□ -1.45
SNRNP40-205ENST00000486941 KREMEN2Q8NCW0 462 aa6.02□□□□□ -1.45
SNRNP40-205ENST00000486941 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.02□□□□□ -1.45
SNRNP40-205ENST00000486941 BVESQ8NE79 360 aa6.02□□□□□ -1.45
SNRNP40-205ENST00000486941 USP33Q8TEY7 942 aa6.02□□□□□ -1.45
SNRNP40-205ENST00000486941 BCL11AQ9H165 835 aa6.02□□□□□ -1.45
SNRNP40-205ENST00000486941 ACBD3Q9H3P7 528 aa6.02□□□□□ -1.45
SNRNP40-205ENST00000486941 TMPRSS5Q9H3S3 457 aa6.02□□□□□ -1.45
SNRNP40-205ENST00000486941 NUDT5Q9UKK9 219 aa6.02□□□□□ -1.45
SNRNP40-205ENST00000486941 CNOT11Q9UKZ1 510 aaKnown RBP6.02□□□□□ -1.45
SNRNP40-205ENST00000486941 PHLPP1O60346 1717 aa6.02□□□□□ -1.45
SNRNP40-205ENST00000486941 UNCXA6NJT0 531 aa6.01□□□□□ -1.45
SNRNP40-205ENST00000486941 GJA9P57773 515 aa6.01□□□□□ -1.45
SNRNP40-205ENST00000486941 SF1Q15637 639 aaKnown RBP6.01□□□□□ -1.45
SNRNP40-205ENST00000486941 DENND5AQ6IQ26 1287 aa6.01□□□□□ -1.45
SNRNP40-205ENST00000486941 SPATA32Q96LK8 384 aa6.01□□□□□ -1.45
SNRNP40-205ENST00000486941 NKX2-4Q9H2Z4 354 aa6.01□□□□□ -1.45
SNRNP40-205ENST00000486941 CYP26B1Q9NR63 512 aa6.01□□□□□ -1.45
SNRNP40-205ENST00000486941 WASF3Q9UPY6 502 aa6.01□□□□□ -1.45
SNRNP40-205ENST00000486941 PIK3R4Q99570 1358 aa6.01□□□□□ -1.45
SNRNP40-205ENST00000486941 JCADQ9P266 1359 aa6.01□□□□□ -1.45
SNRNP40-205ENST00000486941 C22orf46C9J442 243 aa6□□□□□ -1.45
SNRNP40-205ENST00000486941 CAPNS1P04632 268 aa6□□□□□ -1.45
SNRNP40-205ENST00000486941 CYP2C8P10632 490 aa6□□□□□ -1.45
SNRNP40-205ENST00000486941 RPL13P26373 211 aaKnown RBP6□□□□□ -1.45
SNRNP40-205ENST00000486941 STAT5AP42229 794 aa6□□□□□ -1.45
SNRNP40-205ENST00000486941 ITGA1P56199 1179 aa6□□□□□ -1.45
SNRNP40-205ENST00000486941 CR1LQ2VPA4 569 aa6□□□□□ -1.45
SNRNP40-205ENST00000486941 RGL3Q3MIN7 710 aa6□□□□□ -1.45
SNRNP40-205ENST00000486941 Q8N1Y9 231 aa6□□□□□ -1.45
SNRNP40-205ENST00000486941 APBA2Q99767 749 aa6□□□□□ -1.45
SNRNP40-205ENST00000486941 BTG4Q9NY30 223 aa6□□□□□ -1.45
SNRNP40-205ENST00000486941 PALD1Q9ULE6 856 aa6□□□□□ -1.45
SNRNP40-205ENST00000486941 ROCK1Q13464 1354 aa6□□□□□ -1.45
SNRNP40-205ENST00000486941 UNC13BO14795 1591 aa6□□□□□ -1.45
SNRNP40-205ENST00000486941 E9PCH4 1651 aa6□□□□□ -1.45
SNRNP40-205ENST00000486941 ADAMTS13Q76LX8 1427 aa5.99□□□□□ -1.45
SNRNP40-205ENST00000486941 DIP2AQ14689 1571 aa5.99□□□□□ -1.45
SNRNP40-205ENST00000486941 TRBV23OR9-2A0A075B6M9 112 aa5.99□□□□□ -1.45
SNRNP40-205ENST00000486941 TNFRSF1AP19438 455 aa5.99□□□□□ -1.45
SNRNP40-205ENST00000486941 ADAM9Q13443 819 aa5.99□□□□□ -1.45
SNRNP40-205ENST00000486941 CD300LDQ6UXZ3 194 aa5.99□□□□□ -1.45
SNRNP40-205ENST00000486941 ETV3LQ6ZN32 361 aa5.99□□□□□ -1.45
SNRNP40-205ENST00000486941 KYQ8NBH2 561 aa5.99□□□□□ -1.45
SNRNP40-205ENST00000486941 BTN2A2Q8WVV5 523 aa5.99□□□□□ -1.45
SNRNP40-205ENST00000486941 INVSQ9Y283 1065 aa5.99□□□□□ -1.45
SNRNP40-205ENST00000486941 MYRFQ9Y2G1 1151 aa5.99□□□□□ -1.45
SNRNP40-205ENST00000486941 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.99□□□□□ -1.45
SNRNP40-205ENST00000486941 COL16A1Q07092 1604 aaPredicted RBP5.99□□□□□ -1.45
SNRNP40-205ENST00000486941 IQGAP3Q86VI3 1631 aa5.99□□□□□ -1.45
SNRNP40-205ENST00000486941 SPATA31A6Q5VVP1 1343 aa5.99□□□□□ -1.45
SNRNP40-205ENST00000486941 B2RBV5 119 aa5.98□□□□□ -1.45
SNRNP40-205ENST00000486941 LCP1P13796 627 aa5.98□□□□□ -1.45
SNRNP40-205ENST00000486941 ATF3P18847 181 aa5.98□□□□□ -1.45
SNRNP40-205ENST00000486941 BCL6P41182 706 aa5.98□□□□□ -1.45
SNRNP40-205ENST00000486941 PRSS53Q2L4Q9 553 aa5.98□□□□□ -1.45
SNRNP40-205ENST00000486941 MCTP2Q6DN12 878 aa5.98□□□□□ -1.45
SNRNP40-205ENST00000486941 TTLL7Q6ZT98 887 aa5.98□□□□□ -1.45
SNRNP40-205ENST00000486941 TXNDC5Q8NBS9 432 aaKnown RBP5.98□□□□□ -1.45
SNRNP40-205ENST00000486941 MICAL1Q8TDZ2 1067 aa5.98□□□□□ -1.45
SNRNP40-205ENST00000486941 SEC16BQ96JE7 1060 aa5.98□□□□□ -1.45
SNRNP40-205ENST00000486941 SMPD4Q9NXE4 827 aa5.98□□□□□ -1.45
SNRNP40-205ENST00000486941 X6R8D5 127 aa5.98□□□□□ -1.45
SNRNP40-205ENST00000486941 NUP155O75694 1391 aa5.97□□□□□ -1.45
SNRNP40-205ENST00000486941 AHDC1Q5TGY3 1603 aaPredicted RBP5.97□□□□□ -1.45
SNRNP40-205ENST00000486941 DDX3XO00571 662 aaKnown RBP eCLIP5.97□□□□□ -1.45
SNRNP40-205ENST00000486941 MATN3O15232 486 aa5.97□□□□□ -1.45
SNRNP40-205ENST00000486941 PLATP00750 562 aa5.97□□□□□ -1.45
SNRNP40-205ENST00000486941 ITGAVP06756 1048 aa5.97□□□□□ -1.45
SNRNP40-205ENST00000486941 ZNF827Q17R98 1081 aa5.97□□□□□ -1.45
SNRNP40-205ENST00000486941 ZNF772Q68DY9 489 aaPredicted RBP5.97□□□□□ -1.45
SNRNP40-205ENST00000486941 CEP68Q76N32 757 aa5.97□□□□□ -1.45
SNRNP40-205ENST00000486941 LIMS2Q7Z4I7 341 aa5.97□□□□□ -1.45
SNRNP40-205ENST00000486941 MILR1Q7Z6M3 343 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms