RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 MTMR1Q13613 665 aa12.94□□□□□ -0.34
PRKCB-207ENST00000486868 PRKG1Q13976 671 aa12.94□□□□□ -0.34
PRKCB-207ENST00000486868 SPECC1LQ69YQ0 1117 aa12.94□□□□□ -0.34
PRKCB-207ENST00000486868 POTEGQ6S5H5 508 aa12.94□□□□□ -0.34
PRKCB-207ENST00000486868 POTEEQ6S8J3 1075 aa12.94□□□□□ -0.34
PRKCB-207ENST00000486868 SLC30A10Q6XR72 485 aa12.94□□□□□ -0.34
PRKCB-207ENST00000486868 PPP4R3CPQ6ZMV5 832 aa12.94□□□□□ -0.34
PRKCB-207ENST00000486868 MYOCDQ8IZQ8 938 aa12.94□□□□□ -0.34
PRKCB-207ENST00000486868 IL31RAQ8NI17 732 aa12.94□□□□□ -0.34
PRKCB-207ENST00000486868 CACTINQ8WUQ7 758 aaKnown RBP12.94□□□□□ -0.34
PRKCB-207ENST00000486868 DUSP9Q99956 384 aaKnown RBP12.94□□□□□ -0.34
PRKCB-207ENST00000486868 ZSWIM4Q9H7M6 989 aa12.94□□□□□ -0.34
PRKCB-207ENST00000486868 ELP3Q9H9T3 547 aa12.94□□□□□ -0.34
PRKCB-207ENST00000486868 A1CFQ9NQ94 594 aaKnown RBP12.94□□□□□ -0.34
PRKCB-207ENST00000486868 INTS13Q9NVM9 706 aa12.94□□□□□ -0.34
PRKCB-207ENST00000486868 SEL1LQ9UBV2 794 aa12.94□□□□□ -0.34
PRKCB-207ENST00000486868 SLC45A1Q9Y2W3 748 aa12.94□□□□□ -0.34
PRKCB-207ENST00000486868 PCDHA2Q9Y5H9 948 aa12.94□□□□□ -0.34
PRKCB-207ENST00000486868 B4DLN1 442 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 KCNJ18B7U540 433 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 DKC1O60832 514 aaKnown RBP eCLIP12.93□□□□□ -0.34
PRKCB-207ENST00000486868 FCER1AP12319 257 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 IDEP14735 1019 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 SFPQP23246 707 aaKnown RBP eCLIP12.93□□□□□ -0.34
PRKCB-207ENST00000486868 ICAM3P32942 547 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 UBXN2AP68543 259 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 IRX3P78415 501 aaPredicted RBP12.93□□□□□ -0.34
PRKCB-207ENST00000486868 MOGSQ13724 837 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 TRIM14Q14142 442 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 GIT2Q14161 759 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 KCNJ12Q14500 433 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 KRT31Q15323 416 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 GNPTABQ3T906 1256 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 ARSHQ5FYA8 562 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 TREML2Q5T2D2 321 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 ZNF746Q6NUN9 644 aaPredicted RBP12.93□□□□□ -0.34
PRKCB-207ENST00000486868 DYMQ7RTS9 669 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 MIER3Q7Z3K6 550 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 FILIP1Q7Z7B0 1213 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 IRF2BP1Q8IU81 584 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 IQCDQ96DY2 449 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 DYDC2Q96IM9 177 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 TRIM47Q96LD4 638 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 TSG101Q99816 390 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 TIPINQ9BVW5 301 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 OLFML3Q9NRN5 406 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 HOMER2Q9NSB8 354 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 MAGEC2Q9UBF1 373 aaPredicted RBP12.93□□□□□ -0.34
PRKCB-207ENST00000486868 DBR1Q9UK59 544 aaKnown RBP12.93□□□□□ -0.34
PRKCB-207ENST00000486868 ODF2LQ9ULJ1 636 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 COL4A3BPQ9Y5P4 624 aa12.93□□□□□ -0.34
PRKCB-207ENST00000486868 PARP14Q460N5 1801 aa12.92□□□□□ -0.34
PRKCB-207ENST00000486868 A0A1W2PQC6 194 aa12.92□□□□□ -0.34
PRKCB-207ENST00000486868 KRT18P05783 430 aaKnown RBP12.92□□□□□ -0.34
PRKCB-207ENST00000486868 TPM2P07951 284 aa12.92□□□□□ -0.34
PRKCB-207ENST00000486868 EIF2AK2P19525 551 aaKnown RBP12.92□□□□□ -0.34
PRKCB-207ENST00000486868 GUCY2CP25092 1073 aa12.92□□□□□ -0.34
PRKCB-207ENST00000486868 COPB1P53618 953 aaKnown RBP12.92□□□□□ -0.34
PRKCB-207ENST00000486868 SNAPC2Q13487 334 aa12.92□□□□□ -0.34
PRKCB-207ENST00000486868 TTLL12Q14166 644 aaPredicted RBP12.92□□□□□ -0.34
PRKCB-207ENST00000486868 BMT2Q1RMZ1 405 aa12.92□□□□□ -0.34
PRKCB-207ENST00000486868 ZCWPW2Q504Y3 356 aa12.92□□□□□ -0.34
PRKCB-207ENST00000486868 HERC4Q5GLZ8 1057 aaPredicted RBP12.92□□□□□ -0.34
PRKCB-207ENST00000486868 ANKRD40Q6AI12 368 aa12.92□□□□□ -0.34
PRKCB-207ENST00000486868 RINT1Q6NUQ1 792 aa12.92□□□□□ -0.34
PRKCB-207ENST00000486868 C1orf186Q6ZWK4 172 aa12.92□□□□□ -0.34
PRKCB-207ENST00000486868 ZC3H3Q8IXZ2 948 aaKnown RBP12.92□□□□□ -0.34
PRKCB-207ENST00000486868 C4orf19Q8IY42 314 aa12.92□□□□□ -0.34
PRKCB-207ENST00000486868 SMAP1Q8IYB5 467 aaPredicted RBP12.92□□□□□ -0.34
PRKCB-207ENST00000486868 CSGALNACT2Q8N6G5 542 aa12.92□□□□□ -0.34
PRKCB-207ENST00000486868 SHCBP1Q8NEM2 672 aa12.92□□□□□ -0.34
PRKCB-207ENST00000486868 OTUD5Q96G74 571 aa12.92□□□□□ -0.34
PRKCB-207ENST00000486868 CEP63Q96MT8 703 aa12.92□□□□□ -0.34
PRKCB-207ENST00000486868 SRRTQ9BXP5 876 aaKnown RBP12.92□□□□□ -0.34
PRKCB-207ENST00000486868 SPATC1LQ9H0A9 340 aa12.92□□□□□ -0.34
PRKCB-207ENST00000486868 ASCC2Q9H1I8 757 aaPredicted RBP12.92□□□□□ -0.34
PRKCB-207ENST00000486868 TMX1Q9H3N1 280 aa12.92□□□□□ -0.34
PRKCB-207ENST00000486868 SEMA6BQ9H3T3 888 aa12.92□□□□□ -0.34
PRKCB-207ENST00000486868 SLC39A2Q9NP94 309 aa12.92□□□□□ -0.34
PRKCB-207ENST00000486868 RGL1Q9NZL6 768 aa12.92□□□□□ -0.34
PRKCB-207ENST00000486868 TCEAL9Q9UHQ7 104 aa12.92□□□□□ -0.34
PRKCB-207ENST00000486868 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.92□□□□□ -0.343e-8■□□□□ 9.7
PRKCB-207ENST00000486868 UBE4BO95155 1302 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 WDR64B1ANS9 1081 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 EIF3JO75822 258 aaKnown RBP12.91□□□□□ -0.34
PRKCB-207ENST00000486868 GNA14O95837 355 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 SSBP05455 408 aaKnown RBP eCLIP12.91□□□□□ -0.34
PRKCB-207ENST00000486868 MAPTP10636 758 aaKnown RBP12.91□□□□□ -0.34
PRKCB-207ENST00000486868 EDNRBP24530 442 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 QARSP47897 775 aaKnown RBP12.91□□□□□ -0.34
PRKCB-207ENST00000486868 ZNF131P52739 623 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 PMS1P54277 932 aaKnown RBP12.91□□□□□ -0.34
PRKCB-207ENST00000486868 PSMC6P62333 389 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 HERVK_113P62684 666 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 CCZ1BP86790 482 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 CCZ1P86791 482 aaPredicted RBP12.91□□□□□ -0.34
PRKCB-207ENST00000486868 ITGB3BPQ13352 177 aaPredicted RBP12.91□□□□□ -0.34
PRKCB-207ENST00000486868 NOLC1Q14978 699 aaKnown RBP eCLIP12.91□□□□□ -0.34
PRKCB-207ENST00000486868 EDRF1Q3B7T1 1238 aa12.91□□□□□ -0.34
PRKCB-207ENST00000486868 EAPPQ56P03 285 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms