RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 MOXD2PA6NHM9 499 aa10.15□□□□□ -0.78
COL12A1-208ENST00000486533 GOLGA8AA7E2F4 631 aa10.15□□□□□ -0.78
COL12A1-208ENST00000486533 ADCY6O43306 1168 aa10.15□□□□□ -0.78
COL12A1-208ENST00000486533 SLU7O95391 586 aaKnown RBP10.15□□□□□ -0.78
COL12A1-208ENST00000486533 BMP15O95972 392 aa10.15□□□□□ -0.78
COL12A1-208ENST00000486533 XBP1P17861 261 aa10.15□□□□□ -0.78
COL12A1-208ENST00000486533 NDUFA8P51970 172 aa10.15□□□□□ -0.78
COL12A1-208ENST00000486533 MYL5Q02045 173 aa10.15□□□□□ -0.78
COL12A1-208ENST00000486533 SSRP1Q08945 709 aaKnown RBP10.15□□□□□ -0.78
COL12A1-208ENST00000486533 COL9A3Q14050 684 aaPredicted RBP10.15□□□□□ -0.78
COL12A1-208ENST00000486533 KCNA10Q16322 511 aa10.15□□□□□ -0.78
COL12A1-208ENST00000486533 LRIT3Q3SXY7 679 aa10.15□□□□□ -0.78
COL12A1-208ENST00000486533 C1orf53Q5VUE5 145 aa10.15□□□□□ -0.78
COL12A1-208ENST00000486533 NYAP1Q6ZVC0 841 aa10.15□□□□□ -0.78
COL12A1-208ENST00000486533 SH3RF1Q7Z6J0 888 aa10.15□□□□□ -0.78
COL12A1-208ENST00000486533 VTI1AQ96AJ9 217 aa10.15□□□□□ -0.78
COL12A1-208ENST00000486533 TSEN34Q9BSV6 310 aaKnown RBP10.15□□□□□ -0.78
COL12A1-208ENST00000486533 KAT14Q9H8E8 782 aa10.15□□□□□ -0.78
COL12A1-208ENST00000486533 NFIBO00712 420 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 CLTBP09497 229 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 GOLGA8HP0CJ92 632 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 SNHG28P0DPA3 235 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 PFKFB1P16118 471 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 NT5C2P49902 561 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 CCZ1BP86790 482 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 CCZ1P86791 482 aaPredicted RBP10.14□□□□□ -0.79
COL12A1-208ENST00000486533 TNFAIP2Q03169 654 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 GABPB1Q06547 395 aaPredicted RBP10.14□□□□□ -0.79
COL12A1-208ENST00000486533 CCDC178Q5BJE1 867 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 GNASQ5JWF2 1037 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 EEPD1Q7L9B9 569 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 DGKHQ86XP1 1220 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 TRIML1Q8N9V2 468 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 PCSK9Q8NBP7 692 aaKnown RBP10.14□□□□□ -0.79
COL12A1-208ENST00000486533 PNMA1Q8ND90 353 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 KLHDC9Q8NEP7 349 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 BADQ92934 168 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 PKNOX2Q96KN3 472 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 GLT1D1Q96MS3 346 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 PURBQ96QR8 312 aaKnown RBP10.14□□□□□ -0.79
COL12A1-208ENST00000486533 ZSCAN10Q96SZ4 725 aaPredicted RBP10.14□□□□□ -0.79
COL12A1-208ENST00000486533 UBAC1Q9BSL1 405 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 KATNBL1Q9H079 304 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.14□□□□□ -0.79
COL12A1-208ENST00000486533 ARGLU1Q9NWB6 273 aaPredicted RBP10.14□□□□□ -0.79
COL12A1-208ENST00000486533 CLIC4Q9Y696 253 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 MORC2Q9Y6X9 1032 aaPredicted RBP10.14□□□□□ -0.79
COL12A1-208ENST00000486533 ASTN1O14525 1302 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 CDH23Q9H251 3354 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 LCTP09848 1927 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 A0A0C4DFX4 3053 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 LRRC37A2A6NM11 1700 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.14□□□□□ -0.79
COL12A1-208ENST00000486533 TRIM43BA6NCK2 446 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 ASGR1P07306 291 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 CALML3P27482 149 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 ANTXR2P58335 489 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 NCBP1Q09161 790 aaKnown RBP10.14□□□□□ -0.79
COL12A1-208ENST00000486533 BAATQ14032 418 aaPredicted RBP10.14□□□□□ -0.79
COL12A1-208ENST00000486533 USH1GQ495M9 461 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 RILPL1Q5EBL4 403 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 TMEM67Q5HYA8 995 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 GPATCH4Q5T3I0 446 aaKnown RBP10.14□□□□□ -0.79
COL12A1-208ENST00000486533 RESP18Q5W5W9 173 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 KRT40Q6A162 431 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 CCSAPQ6IQ19 270 aaPredicted RBP10.14□□□□□ -0.79
COL12A1-208ENST00000486533 APOA5Q6Q788 366 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 CHST3Q7LGC8 479 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 TMC6Q7Z403 805 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 FBXO16Q8IX29 292 aaPredicted RBP10.14□□□□□ -0.79
COL12A1-208ENST00000486533 ENAHQ8N8S7 591 aaPredicted RBP10.14□□□□□ -0.79
COL12A1-208ENST00000486533 ZNF592Q92610 1267 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 TRIM43Q96BQ3 446 aaPredicted RBP10.14□□□□□ -0.79
COL12A1-208ENST00000486533 PYM1Q9BRP8 204 aaKnown RBP10.14□□□□□ -0.79
COL12A1-208ENST00000486533 UPF3AQ9H1J1 476 aaKnown RBP10.14□□□□□ -0.79
COL12A1-208ENST00000486533 CPVLQ9H3G5 476 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 ZSWIM5Q9P217 1185 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 ADD3Q9UEY8 706 aaKnown RBP10.14□□□□□ -0.79
COL12A1-208ENST00000486533 TUBE1Q9UJT0 475 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 PNMA2Q9UL42 364 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 SLC12A7Q9Y666 1083 aa10.14□□□□□ -0.79
COL12A1-208ENST00000486533 TNKSO95271 1327 aa10.13□□□□□ -0.79
COL12A1-208ENST00000486533 PHLPP2Q6ZVD8 1323 aa10.13□□□□□ -0.79
COL12A1-208ENST00000486533 DCDC2CA8MYV0 355 aa10.13□□□□□ -0.79
COL12A1-208ENST00000486533 DTNBO60941 627 aa10.13□□□□□ -0.79
COL12A1-208ENST00000486533 KIF20AO95235 890 aa10.13□□□□□ -0.79
COL12A1-208ENST00000486533 SERPINC1P01008 464 aa10.13□□□□□ -0.79
COL12A1-208ENST00000486533 RAG1P15918 1043 aa10.13□□□□□ -0.79
COL12A1-208ENST00000486533 U2AF2P26368 475 aaKnown RBP eCLIP10.13□□□□□ -0.79
COL12A1-208ENST00000486533 CST5P28325 142 aaPredicted RBP10.13□□□□□ -0.79
COL12A1-208ENST00000486533 GJA9P57773 515 aa10.13□□□□□ -0.79
COL12A1-208ENST00000486533 BEX3Q00994 111 aa10.13□□□□□ -0.79
COL12A1-208ENST00000486533 DMTNQ08495 405 aa10.13□□□□□ -0.79
COL12A1-208ENST00000486533 SLC30A10Q6XR72 485 aa10.13□□□□□ -0.79
COL12A1-208ENST00000486533 RNF207Q6ZRF8 634 aa10.13□□□□□ -0.79
COL12A1-208ENST00000486533 TLK2Q86UE8 772 aa10.13□□□□□ -0.79
COL12A1-208ENST00000486533 DEFB123Q8N688 67 aa10.13□□□□□ -0.79
COL12A1-208ENST00000486533 KRI1Q8N9T8 703 aaKnown RBP10.13□□□□□ -0.79
COL12A1-208ENST00000486533 FTOQ9C0B1 505 aaKnown RBP eCLIP10.13□□□□□ -0.79
COL12A1-208ENST00000486533 XPO4Q9C0E2 1151 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms