RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 WDR78Q5VTH9 848 aa5.39□□□□□ -1.55
R3HDM1-217ENST00000486532 LIMS2Q7Z4I7 341 aa5.39□□□□□ -1.55
R3HDM1-217ENST00000486532 TMEM145Q8NBT3 493 aa5.39□□□□□ -1.55
R3HDM1-217ENST00000486532 MICAL1Q8TDZ2 1067 aa5.39□□□□□ -1.55
R3HDM1-217ENST00000486532 ZNF622Q969S3 477 aaKnown RBP eCLIP5.39□□□□□ -1.55
R3HDM1-217ENST00000486532 ZSWIM3Q96MP5 696 aa5.39□□□□□ -1.55
R3HDM1-217ENST00000486532 SYT3Q9BQG1 590 aa5.39□□□□□ -1.55
R3HDM1-217ENST00000486532 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.39□□□□□ -1.557e-13■□□□□ 9.5
R3HDM1-217ENST00000486532 PPP4R1LQ9P1A2 415 aa5.39□□□□□ -1.55
R3HDM1-217ENST00000486532 ASH2LQ9UBL3 628 aa5.39□□□□□ -1.55
R3HDM1-217ENST00000486532 ST6GALNAC2Q9UJ37 374 aa5.39□□□□□ -1.55
R3HDM1-217ENST00000486532 MRVI1Q9Y6F6 885 aa5.39□□□□□ -1.55
R3HDM1-217ENST00000486532 CYR61O00622 381 aa5.38□□□□□ -1.55
R3HDM1-217ENST00000486532 TBX1O43435 398 aa5.38□□□□□ -1.55
R3HDM1-217ENST00000486532 AKAP8O43823 692 aaKnown RBP5.38□□□□□ -1.55
R3HDM1-217ENST00000486532 FBXO21O94952 628 aa5.38□□□□□ -1.55
R3HDM1-217ENST00000486532 ERCC5P28715 1186 aaPredicted RBP5.38□□□□□ -1.55
R3HDM1-217ENST00000486532 SPIRE1Q08AE8 756 aa5.38□□□□□ -1.55
R3HDM1-217ENST00000486532 HSP90AA2PQ14568 343 aaPredicted RBP5.38□□□□□ -1.55
R3HDM1-217ENST00000486532 LONRF3Q496Y0 759 aa5.38□□□□□ -1.55
R3HDM1-217ENST00000486532 FAM43BQ6ZT52 329 aaPredicted RBP5.38□□□□□ -1.55
R3HDM1-217ENST00000486532 SMC5Q8IY18 1101 aa5.38□□□□□ -1.55
R3HDM1-217ENST00000486532 IFNL2Q8IZJ0 200 aa5.38□□□□□ -1.55
R3HDM1-217ENST00000486532 SH3RF3Q8TEJ3 882 aaPredicted RBP5.38□□□□□ -1.55
R3HDM1-217ENST00000486532 SECISBP2LQ93073 1101 aaKnown RBP5.38□□□□□ -1.55
R3HDM1-217ENST00000486532 MBD6Q96DN6 1003 aa5.38□□□□□ -1.55
R3HDM1-217ENST00000486532 SGSM3Q96HU1 749 aa5.38□□□□□ -1.55
R3HDM1-217ENST00000486532 ZFYVE21Q9BQ24 234 aa5.38□□□□□ -1.55
R3HDM1-217ENST00000486532 LGR4Q9BXB1 951 aa5.38□□□□□ -1.55
R3HDM1-217ENST00000486532 KLC2Q9H0B6 622 aa5.38□□□□□ -1.55
R3HDM1-217ENST00000486532 ZDHHC9Q9Y397 364 aa5.38□□□□□ -1.55
R3HDM1-217ENST00000486532 B4GALT4O60513 344 aa5.37□□□□□ -1.55
R3HDM1-217ENST00000486532 FSHBP01225 129 aa5.37□□□□□ -1.55
R3HDM1-217ENST00000486532 LCP1P13796 627 aa5.37□□□□□ -1.55
R3HDM1-217ENST00000486532 TACR2P21452 398 aa5.37□□□□□ -1.55
R3HDM1-217ENST00000486532 SELENOPP49908 381 aa5.37□□□□□ -1.55
R3HDM1-217ENST00000486532 MLLT6P55198 1093 aaPredicted RBP5.37□□□□□ -1.55
R3HDM1-217ENST00000486532 SMAD2Q15796 467 aaKnown RBP5.37□□□□□ -1.55
R3HDM1-217ENST00000486532 PRSS53Q2L4Q9 553 aa5.37□□□□□ -1.55
R3HDM1-217ENST00000486532 ZNF568Q3ZCX4 644 aa5.37□□□□□ -1.55
R3HDM1-217ENST00000486532 RALYLQ86SE5 291 aaKnown RBP5.37□□□□□ -1.55
R3HDM1-217ENST00000486532 C1orf159Q96HA4 380 aa5.37□□□□□ -1.55
R3HDM1-217ENST00000486532 SEC61A2Q9H9S3 476 aa5.37□□□□□ -1.55
R3HDM1-217ENST00000486532 KIAA1522Q9P206 1035 aaPredicted RBP5.37□□□□□ -1.55
R3HDM1-217ENST00000486532 FBXL7Q9UJT9 491 aa5.37□□□□□ -1.55
R3HDM1-217ENST00000486532 ADAM29Q9UKF5 820 aa5.37□□□□□ -1.55
R3HDM1-217ENST00000486532 ARNTLO00327 626 aa5.36□□□□□ -1.55
R3HDM1-217ENST00000486532 FZD7O75084 574 aa5.36□□□□□ -1.55
R3HDM1-217ENST00000486532 ENO2P09104 434 aaPredicted RBP5.36□□□□□ -1.55
R3HDM1-217ENST00000486532 C6P13671 934 aa5.36□□□□□ -1.55
R3HDM1-217ENST00000486532 PPP2R2AP63151 447 aa5.36□□□□□ -1.55
R3HDM1-217ENST00000486532 ARID5AQ03989 594 aa5.36□□□□□ -1.55
R3HDM1-217ENST00000486532 KIZQ2M2Z5 673 aa5.36□□□□□ -1.55
R3HDM1-217ENST00000486532 CASC1Q6TDU7 716 aa5.36□□□□□ -1.55
R3HDM1-217ENST00000486532 TMC5Q6UXY8 1006 aa5.36□□□□□ -1.55
R3HDM1-217ENST00000486532 TSHZ1Q6ZSZ6 1077 aa5.36□□□□□ -1.55
R3HDM1-217ENST00000486532 APBB1IPQ7Z5R6 666 aaPredicted RBP5.36□□□□□ -1.55
R3HDM1-217ENST00000486532 REXO1L1PQ8IX06 675 aa5.36□□□□□ -1.55
R3HDM1-217ENST00000486532 SLC16A11Q8NCK7 471 aa5.36□□□□□ -1.55
R3HDM1-217ENST00000486532 DNERQ8NFT8 737 aa5.36□□□□□ -1.55
R3HDM1-217ENST00000486532 IGDCC4Q8TDY8 1250 aa5.36□□□□□ -1.55
R3HDM1-217ENST00000486532 DCAF4Q8WV16 495 aa5.36□□□□□ -1.55
R3HDM1-217ENST00000486532 ZCCHC14Q8WYQ9 949 aaKnown RBP5.36□□□□□ -1.55
R3HDM1-217ENST00000486532 SORCS2Q96PQ0 1159 aa5.36□□□□□ -1.55
R3HDM1-217ENST00000486532 PDGFDQ9GZP0 370 aaPredicted RBP5.36□□□□□ -1.55
R3HDM1-217ENST00000486532 B2RBV5 119 aa5.35□□□□□ -1.55
R3HDM1-217ENST00000486532 MUSKO15146 869 aa5.35□□□□□ -1.55
R3HDM1-217ENST00000486532 GJB6O95452 261 aa5.35□□□□□ -1.55
R3HDM1-217ENST00000486532 KRTAP1-1Q07627 177 aa5.35□□□□□ -1.55
R3HDM1-217ENST00000486532 ICAM4Q14773 271 aa5.35□□□□□ -1.55
R3HDM1-217ENST00000486532 SF1Q15637 639 aaKnown RBP5.35□□□□□ -1.55
R3HDM1-217ENST00000486532 SLC10A6Q3KNW5 377 aa5.35□□□□□ -1.55
R3HDM1-217ENST00000486532 OTOP3Q7RTS5 596 aa5.35□□□□□ -1.55
R3HDM1-217ENST00000486532 NME8Q8N427 588 aa5.35□□□□□ -1.55
R3HDM1-217ENST00000486532 DTX3Q8N9I9 347 aa5.35□□□□□ -1.55
R3HDM1-217ENST00000486532 IER2Q9BTL4 223 aa5.35□□□□□ -1.55
R3HDM1-217ENST00000486532 CD248Q9HCU0 757 aa5.35□□□□□ -1.55
R3HDM1-217ENST00000486532 TESMINQ9Y4I5 508 aa5.35□□□□□ -1.55
R3HDM1-217ENST00000486532 PATE3B3GLJ2 98 aa5.34□□□□□ -1.55
R3HDM1-217ENST00000486532 ZNF623O75123 536 aa5.34□□□□□ -1.55
R3HDM1-217ENST00000486532 ZRANB2O95218 330 aaKnown RBP eCLIP5.34□□□□□ -1.55
R3HDM1-217ENST00000486532 GNAT1P11488 350 aa5.34□□□□□ -1.55
R3HDM1-217ENST00000486532 FAHP16930 419 aa5.34□□□□□ -1.55
R3HDM1-217ENST00000486532 DEKP35659 375 aaKnown RBP5.34□□□□□ -1.55
R3HDM1-217ENST00000486532 ETFBP38117 255 aa5.34□□□□□ -1.55
R3HDM1-217ENST00000486532 HMGA2P52926 109 aa5.34□□□□□ -1.55
R3HDM1-217ENST00000486532 ZC3H6P61129 1189 aaKnown RBP5.34□□□□□ -1.55
R3HDM1-217ENST00000486532 MYBPC2Q14324 1141 aa5.34□□□□□ -1.55
R3HDM1-217ENST00000486532 MRM1Q6IN84 353 aaKnown RBP5.34□□□□□ -1.55
R3HDM1-217ENST00000486532 Q6ZUG5 572 aa5.34□□□□□ -1.55
R3HDM1-217ENST00000486532 USP53Q70EK8 1073 aa5.34□□□□□ -1.55
R3HDM1-217ENST00000486532 FAM9BQ8IZU0 186 aa5.34□□□□□ -1.55
R3HDM1-217ENST00000486532 PIP4K2CQ8TBX8 421 aa5.34□□□□□ -1.55
R3HDM1-217ENST00000486532 ANP32BQ92688 251 aaKnown RBP5.34□□□□□ -1.55
R3HDM1-217ENST00000486532 AJUBAQ96IF1 538 aa5.34□□□□□ -1.55
R3HDM1-217ENST00000486532 PHF20Q9BVI0 1012 aa5.34□□□□□ -1.55
R3HDM1-217ENST00000486532 VPS11Q9H270 941 aa5.34□□□□□ -1.55
R3HDM1-217ENST00000486532 NOP58Q9Y2X3 529 aaKnown RBP5.34□□□□□ -1.55
R3HDM1-217ENST00000486532 A0A1W2PQU0 124 aa5.33□□□□□ -1.56
R3HDM1-217ENST00000486532 FAM47E-STBD1D6RA91 191 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms