RNA–Protein interactions for RNA: ENST00000486509.1

CDC7-204, Transcript of cell division cycle 7, humanhuman

TSL 3

Gene CDC7, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-204ENST00000486509 KISS1RQ969F8 398 aaPredicted RBP5.75□□□□□ -1.49
CDC7-204ENST00000486509 DACT3Q96B18 629 aaPredicted RBP5.75□□□□□ -1.49
CDC7-204ENST00000486509 CDC6Q99741 560 aa5.75□□□□□ -1.49
CDC7-204ENST00000486509 ZFYVE21Q9BQ24 234 aa5.75□□□□□ -1.49
CDC7-204ENST00000486509 JAM3Q9BX67 310 aa5.75□□□□□ -1.49
CDC7-204ENST00000486509 AP5M1Q9H0R1 490 aa5.75□□□□□ -1.49
CDC7-204ENST00000486509 PALD1Q9ULE6 856 aa5.75□□□□□ -1.49
CDC7-204ENST00000486509 COA3Q9Y2R0 106 aaPredicted RBP5.75□□□□□ -1.49
CDC7-204ENST00000486509 TRAF6Q9Y4K3 522 aa5.75□□□□□ -1.49
CDC7-204ENST00000486509 SHANK2Q9UPX8 1470 aa5.75□□□□□ -1.49
CDC7-204ENST00000486509 KIDINS220Q9ULH0 1771 aa5.75□□□□□ -1.49
CDC7-204ENST00000486509 ABCC1P33527 1531 aa5.74□□□□□ -1.49
CDC7-204ENST00000486509 PLA2G1BP04054 148 aaKnown RBP5.74□□□□□ -1.49
CDC7-204ENST00000486509 PFKLP17858 780 aa5.74□□□□□ -1.49
CDC7-204ENST00000486509 SUMO1P63165 101 aaKnown RBP5.74□□□□□ -1.49
CDC7-204ENST00000486509 FOXO4P98177 505 aa5.74□□□□□ -1.49
CDC7-204ENST00000486509 BMS1Q14692 1282 aaKnown RBP5.74□□□□□ -1.49
CDC7-204ENST00000486509 CNKSR3Q6P9H4 555 aa5.74□□□□□ -1.49
CDC7-204ENST00000486509 SPOCD1Q6ZMY3 1216 aa5.74□□□□□ -1.49
CDC7-204ENST00000486509 AMIGO3Q86WK7 504 aa5.74□□□□□ -1.49
CDC7-204ENST00000486509 MIB1Q86YT6 1006 aa5.74□□□□□ -1.49
CDC7-204ENST00000486509 DHX37Q8IY37 1157 aaKnown RBP5.74□□□□□ -1.49
CDC7-204ENST00000486509 IFNL3Q8IZI9 196 aa5.74□□□□□ -1.49
CDC7-204ENST00000486509 ZSCAN18Q8TBC5 510 aaPredicted RBP5.74□□□□□ -1.49
CDC7-204ENST00000486509 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.74□□□□□ -1.49
CDC7-204ENST00000486509 CPA5Q8WXQ8 436 aa5.74□□□□□ -1.49
CDC7-204ENST00000486509 DHRS4Q9BTZ2 278 aa5.74□□□□□ -1.49
CDC7-204ENST00000486509 EPB41L1Q9H4G0 881 aa5.74□□□□□ -1.49
CDC7-204ENST00000486509 TMA7Q9Y2S6 64 aaKnown RBP5.74□□□□□ -1.49
CDC7-204ENST00000486509 MRPS23Q9Y3D9 190 aaKnown RBP5.74□□□□□ -1.49
CDC7-204ENST00000486509 ZMYM3Q14202 1370 aa5.74□□□□□ -1.49
CDC7-204ENST00000486509 NEURL4Q96JN8 1562 aa5.74□□□□□ -1.49
CDC7-204ENST00000486509 RNF17Q9BXT8 1623 aaKnown RBP5.74□□□□□ -1.49
CDC7-204ENST00000486509 ARHGAP5Q13017 1502 aa5.74□□□□□ -1.49
CDC7-204ENST00000486509 CDK13Q14004 1512 aaKnown RBP5.74□□□□□ -1.49
CDC7-204ENST00000486509 ITSN2Q9NZM3 1697 aa5.73□□□□□ -1.49
CDC7-204ENST00000486509 SYNMO15061 1565 aa5.73□□□□□ -1.49
CDC7-204ENST00000486509 PLXNC1O60486 1568 aa5.73□□□□□ -1.49
CDC7-204ENST00000486509 A2ML1A8K2U0 1454 aa5.73□□□□□ -1.49
CDC7-204ENST00000486509 RFXAPO00287 272 aa5.73□□□□□ -1.49
CDC7-204ENST00000486509 TADA3O75528 432 aa5.73□□□□□ -1.49
CDC7-204ENST00000486509 ZSCAN22P10073 491 aaPredicted RBP5.73□□□□□ -1.49
CDC7-204ENST00000486509 EMC4Q5J8M3 183 aa5.73□□□□□ -1.49
CDC7-204ENST00000486509 MILR1Q7Z6M3 343 aa5.73□□□□□ -1.49
CDC7-204ENST00000486509 B3GNT8Q7Z7M8 397 aa5.73□□□□□ -1.49
CDC7-204ENST00000486509 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.73□□□□□ -1.49
CDC7-204ENST00000486509 PWWP2AQ96N64 755 aa5.73□□□□□ -1.49
CDC7-204ENST00000486509 ZNF652Q9Y2D9 606 aa5.73□□□□□ -1.49
CDC7-204ENST00000486509 DNMT1P26358 1616 aaKnown RBP5.73□□□□□ -1.49
CDC7-204ENST00000486509 FAM135AQ9P2D6 1515 aa5.73□□□□□ -1.49
CDC7-204ENST00000486509 VWDEQ8N2E2 1590 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 MED14O60244 1454 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 CDC42BPBQ9Y5S2 1711 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 TCRBV5S2A0A599 114 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 HGSO14964 777 aaPredicted RBP5.72□□□□□ -1.49
CDC7-204ENST00000486509 DGKIO75912 1065 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 C8BP07358 591 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 GRK2P25098 689 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 GRK3P35626 688 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 HTRA3P83110 453 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 CACNB2Q08289 660 aaPredicted RBP5.72□□□□□ -1.49
CDC7-204ENST00000486509 KIZQ2M2Z5 673 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 KRTAP19-4Q3LI73 84 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 CCDC144BQ3MJ40 725 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 C2orf27AQ580R0 203 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 STEAP3Q658P3 488 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 MAMDC2Q7Z304 686 aaPredicted RBP5.72□□□□□ -1.49
CDC7-204ENST00000486509 SIAH1Q8IUQ4 282 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 AFAP1Q8N556 730 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 FAM26EQ8N5C1 309 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 SMARCC2Q8TAQ2 1214 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 THAP3Q8WTV1 239 aaPredicted RBP5.72□□□□□ -1.49
CDC7-204ENST00000486509 PTPRN2Q92932 1015 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 NOX5Q96PH1 765 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 SYT3Q9BQG1 590 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 PIF1Q9H611 641 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 DEPDC5O75140 1603 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 PREX2Q70Z35 1606 aa5.72□□□□□ -1.49
CDC7-204ENST00000486509 TROQ12816 1431 aaPredicted RBP5.72□□□□□ -1.49
CDC7-204ENST00000486509 SOD2P04179 222 aa5.71□□□□□ -1.5
CDC7-204ENST00000486509 AFF3P51826 1226 aaKnown RBP5.71□□□□□ -1.5
CDC7-204ENST00000486509 CHRNA2Q15822 529 aa5.71□□□□□ -1.5
CDC7-204ENST00000486509 NFE2L2Q16236 605 aa5.71□□□□□ -1.5
CDC7-204ENST00000486509 ZC3H12BQ5HYM0 836 aaKnown RBP5.71□□□□□ -1.5
CDC7-204ENST00000486509 HABP4Q5JVS0 413 aaKnown RBP5.71□□□□□ -1.5
CDC7-204ENST00000486509 ETV3LQ6ZN32 361 aa5.71□□□□□ -1.5
CDC7-204ENST00000486509 OTOP3Q7RTS5 596 aa5.71□□□□□ -1.5
CDC7-204ENST00000486509 FAM126BQ8IXS8 530 aa5.71□□□□□ -1.5
CDC7-204ENST00000486509 ARRDC4Q8NCT1 418 aa5.71□□□□□ -1.5
CDC7-204ENST00000486509 PIP4K2CQ8TBX8 421 aa5.71□□□□□ -1.5
CDC7-204ENST00000486509 FNIP1Q8TF40 1166 aa5.71□□□□□ -1.5
CDC7-204ENST00000486509 IPO9Q96P70 1041 aaKnown RBP5.71□□□□□ -1.5
CDC7-204ENST00000486509 ZSWIM4Q9H7M6 989 aa5.71□□□□□ -1.5
CDC7-204ENST00000486509 IPPKQ9H8X2 491 aa5.71□□□□□ -1.5
CDC7-204ENST00000486509 KANSL2Q9H9L4 492 aa5.71□□□□□ -1.5
CDC7-204ENST00000486509 SLC6A20Q9NP91 592 aa5.71□□□□□ -1.5
CDC7-204ENST00000486509 RGS17Q9UGC6 210 aaPredicted RBP5.71□□□□□ -1.5
CDC7-204ENST00000486509 PTCH2Q9Y6C5 1203 aa5.71□□□□□ -1.5
CDC7-204ENST00000486509 CLTCQ00610 1675 aaKnown RBP5.71□□□□□ -1.5
CDC7-204ENST00000486509 CLIP1P30622 1438 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms