RNA–Protein interactions for RNA: ENST00000486506.5

MECP2-209, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 2,907 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-209ENST00000486506 SSBP05455 408 aaKnown RBP eCLIP8.59□□□□□ -1.03
MECP2-209ENST00000486506 LDHCP07864 332 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 GNAT2P19087 354 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 RXRAP19793 462 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 CXCL9Q07325 125 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 C6orf89Q6UWU4 347 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 FERMT3Q86UX7 667 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 TGFBRAP1Q8WUH2 860 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 NDNQ99608 321 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 NACAP1Q9BZK3 213 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 SUGCTQ9HAC7 445 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 SEL1LQ9UBV2 794 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 PPP2R2CQ9Y2T4 447 aa8.59□□□□□ -1.03
MECP2-209ENST00000486506 DPPA5A6NC42 116 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 E7EWF7 191 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 SH3BP5O60239 455 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 CUTAO60888 179 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 PFDN1O60925 122 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 SH3BGRP55822 239 aaPredicted RBP8.58□□□□□ -1.04
MECP2-209ENST00000486506 CTDSPL2Q05D32 466 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 ST3GAL1Q11201 340 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 INAQ16352 499 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 ERICH1Q86X53 443 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 DHX58Q96C10 678 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 CRNKL1Q9BZJ0 848 aaKnown RBP8.58□□□□□ -1.04
MECP2-209ENST00000486506 SLC7A5P2Q9GIP4 190 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 DCP1AQ9NPI6 582 aaPredicted RBP8.58□□□□□ -1.04
MECP2-209ENST00000486506 HPCAL4Q9UM19 191 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 USP17L12C9JPN9 530 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 USP17L21D6R901 530 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 DNAJC8O75937 253 aaPredicted RBP8.58□□□□□ -1.04
MECP2-209ENST00000486506 YBX3P16989 372 aaKnown RBP eCLIP8.58□□□□□ -1.04
MECP2-209ENST00000486506 MLH1P40692 756 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 BPIFB4P59827 614 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 TBC1D10CQ8IV04 446 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 MAPKAPK5Q8IW41 473 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 SNX27Q96L92 541 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 NEK1Q96PY6 1258 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 NR1H4Q96RI1 486 aaPredicted RBP8.58□□□□□ -1.04
MECP2-209ENST00000486506 UIMC1Q96RL1 719 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 ZKSCAN3Q9BRR0 538 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 GOLPH3LQ9H4A5 285 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 SYNCQ9H7C4 482 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 HAUS2Q9NVX0 235 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 ZNF148Q9UQR1 794 aa8.58□□□□□ -1.04
MECP2-209ENST00000486506 BRCA1P38398 1863 aaKnown RBP8.58□□□□□ -1.04
MECP2-209ENST00000486506 N4BP3O15049 544 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 ARHGAP6O43182 974 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 TBC1D12O60347 775 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 PRDM1O75626 825 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 PDGFRBP09619 1106 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 CRKP46108 304 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 CNGA3Q16281 694 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 BLOC1S2Q6QNY1 142 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 SLC7A5P1Q8MH63 180 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 L3MBTL3Q96JM7 780 aaPredicted RBP8.57□□□□□ -1.04
MECP2-209ENST00000486506 MRPL46Q9H2W6 279 aaKnown RBP8.57□□□□□ -1.04
MECP2-209ENST00000486506 VCX3BQ9H321 246 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 RABEP2Q9H5N1 569 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 ZSWIM6Q9HCJ5 1215 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 VCX3AQ9NNX9 186 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 GINM1Q9NU53 330 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 MCM9Q9NXL9 1143 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 PRELID1Q9Y255 219 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 L3MBTL1Q9Y468 752 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 CYP46A1Q9Y6A2 500 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 GAKO14976 1311 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 GOLGA8KD6RF30 607 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 CLTAP09496 248 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 USP17L8P0C7I0 530 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 PSMA5P28066 241 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 CCNG1P51959 295 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 CACNB3P54284 484 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 CSE1LP55060 971 aaKnown RBP8.57□□□□□ -1.04
MECP2-209ENST00000486506 PPP4CP60510 307 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 VSNL1P62760 191 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 PICALMQ13492 652 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 STIM1Q13586 685 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 MAP7Q14244 749 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 LACTB2Q53H82 288 aaPredicted RBP8.57□□□□□ -1.04
MECP2-209ENST00000486506 NAA35Q5VZE5 725 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 APOBEC3HQ6NTF7 200 aaKnown RBP8.57□□□□□ -1.04
MECP2-209ENST00000486506 RSBN1LQ6PCB5 846 aaPredicted RBP8.57□□□□□ -1.04
MECP2-209ENST00000486506 CCDC82Q8N4S0 544 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 KRI1Q8N9T8 703 aaKnown RBP8.57□□□□□ -1.04
MECP2-209ENST00000486506 NSUN7Q8NE18 718 aaKnown RBP8.57□□□□□ -1.04
MECP2-209ENST00000486506 TM6SF1Q9BZW5 370 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 CCDC68Q9H2F9 335 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 ZC3H4Q9UPT8 1303 aaKnown RBP8.57□□□□□ -1.04
MECP2-209ENST00000486506 MYH15Q9Y2K3 1946 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 BAZ2BQ9UIF8 2168 aaKnown RBP8.57□□□□□ -1.04
MECP2-209ENST00000486506 NDUFB5O43674 189 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 FLOT1O75955 427 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 CCDC159P0C7I6 412 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 CYP2D6P10635 497 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 FOSL1P15407 271 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 CCT6AP40227 531 aaKnown RBP8.57□□□□□ -1.04
MECP2-209ENST00000486506 DMPKQ09013 629 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 KRT32Q14532 448 aa8.57□□□□□ -1.04
MECP2-209ENST00000486506 ALX1Q15699 326 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms