RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 SLC9A2Q9UBY0 812 aa14.69□□□□□ -0.06
CHMP3-208ENST00000486404 TCEAL9Q9UHQ7 104 aa14.69□□□□□ -0.06
CHMP3-208ENST00000486404 SLC4A7Q9Y6M7 1214 aa14.69□□□□□ -0.06
CHMP3-208ENST00000486404 TET1Q8NFU7 2136 aa14.69□□□□□ -0.06
CHMP3-208ENST00000486404 PTPRSQ13332 1948 aa14.68□□□□□ -0.06
CHMP3-208ENST00000486404 ATP9AO75110 1047 aa14.68□□□□□ -0.06
CHMP3-208ENST00000486404 DEXIO95424 95 aa14.68□□□□□ -0.06
CHMP3-208ENST00000486404 PARNO95453 639 aaKnown RBP14.68□□□□□ -0.06
CHMP3-208ENST00000486404 CKBP12277 381 aa14.68□□□□□ -0.06
CHMP3-208ENST00000486404 THPOP40225 353 aa14.68□□□□□ -0.06
CHMP3-208ENST00000486404 SETQ01105 290 aaPredicted RBP14.68□□□□□ -0.06
CHMP3-208ENST00000486404 ANKRD1Q15327 319 aa14.68□□□□□ -0.06
CHMP3-208ENST00000486404 RAB30Q15771 203 aa14.68□□□□□ -0.06
CHMP3-208ENST00000486404 RASIP1Q5U651 963 aa14.68□□□□□ -0.06
CHMP3-208ENST00000486404 SEPT1Q8WYJ6 367 aa14.68□□□□□ -0.06
CHMP3-208ENST00000486404 DHX38Q92620 1227 aaKnown RBP14.68□□□□□ -0.06
CHMP3-208ENST00000486404 TIFAQ96CG3 184 aa14.68□□□□□ -0.06
CHMP3-208ENST00000486404 CTAGE1Q96RT6 745 aa14.68□□□□□ -0.06
CHMP3-208ENST00000486404 SLKQ9H2G2 1235 aaPredicted RBP14.68□□□□□ -0.06
CHMP3-208ENST00000486404 AZI2Q9H6S1 392 aa14.68□□□□□ -0.06
CHMP3-208ENST00000486404 ERAP1Q9NZ08 941 aa14.68□□□□□ -0.06
CHMP3-208ENST00000486404 MSRAQ9UJ68 235 aa14.68□□□□□ -0.06
CHMP3-208ENST00000486404 WDR81Q562E7 1941 aa14.68□□□□□ -0.06
CHMP3-208ENST00000486404 MICAL3Q7RTP6 2002 aa14.68□□□□□ -0.06
CHMP3-208ENST00000486404 SIP14410 1827 aa14.67□□□□□ -0.06
CHMP3-208ENST00000486404 MARK3P27448 753 aa14.67□□□□□ -0.06
CHMP3-208ENST00000486404 KCNJ6P48051 423 aa14.67□□□□□ -0.06
CHMP3-208ENST00000486404 NLRP5P59047 1200 aa14.67□□□□□ -0.06
CHMP3-208ENST00000486404 ZNF200P98182 395 aaPredicted RBP14.67□□□□□ -0.06
CHMP3-208ENST00000486404 RBL2Q08999 1139 aa14.67□□□□□ -0.06
CHMP3-208ENST00000486404 NIPA1Q7RTP0 329 aa14.67□□□□□ -0.06
CHMP3-208ENST00000486404 SERINC5Q86VE9 423 aa14.67□□□□□ -0.06
CHMP3-208ENST00000486404 PLA2G4DQ86XP0 818 aa14.67□□□□□ -0.06
CHMP3-208ENST00000486404 CYP2W1Q8TAV3 490 aa14.67□□□□□ -0.06
CHMP3-208ENST00000486404 RASGRP4Q8TDF6 673 aa14.67□□□□□ -0.06
CHMP3-208ENST00000486404 AGO4Q9HCK5 861 aaKnown RBP14.67□□□□□ -0.06
CHMP3-208ENST00000486404 SH3GLB2Q9NR46 395 aa14.67□□□□□ -0.06
CHMP3-208ENST00000486404 STXBP5LQ9Y2K9 1186 aa14.67□□□□□ -0.06
CHMP3-208ENST00000486404 NFASCO94856 1347 aa14.66□□□□□ -0.06
CHMP3-208ENST00000486404 EMSYQ7Z589 1322 aa14.66□□□□□ -0.06
CHMP3-208ENST00000486404 GRXCR1A8MXD5 290 aa14.66□□□□□ -0.06
CHMP3-208ENST00000486404 DDX39AO00148 427 aaKnown RBP14.66□□□□□ -0.06
CHMP3-208ENST00000486404 BAIAP3O94812 1187 aa14.66□□□□□ -0.06
CHMP3-208ENST00000486404 ATP2A2P16615 1042 aaKnown RBP14.66□□□□□ -0.06
CHMP3-208ENST00000486404 PPFIA1Q13136 1202 aa14.66□□□□□ -0.06
CHMP3-208ENST00000486404 LMBR1Q8WVP7 490 aa14.66□□□□□ -0.06
CHMP3-208ENST00000486404 GUCD1Q96NT3 240 aa14.66□□□□□ -0.06
CHMP3-208ENST00000486404 SLC9A7Q96T83 725 aa14.66□□□□□ -0.06
CHMP3-208ENST00000486404 PBX4Q9BYU1 374 aa14.66□□□□□ -0.06
CHMP3-208ENST00000486404 SMARCAD1Q9H4L7 1026 aa14.66□□□□□ -0.06
CHMP3-208ENST00000486404 SETD4Q9NVD3 440 aa14.66□□□□□ -0.06
CHMP3-208ENST00000486404 TRPC6Q9Y210 931 aa14.66□□□□□ -0.06
CHMP3-208ENST00000486404 TELO2Q9Y4R8 837 aa14.66□□□□□ -0.06
CHMP3-208ENST00000486404 GSTTP1A0A1W2PQM5 241 aa14.65□□□□□ -0.06
CHMP3-208ENST00000486404 CTSHP09668 335 aa14.65□□□□□ -0.06
CHMP3-208ENST00000486404 ARP10275 920 aa14.65□□□□□ -0.06
CHMP3-208ENST00000486404 HOXC8P31273 242 aa14.65□□□□□ -0.06
CHMP3-208ENST00000486404 ACTR2P61160 394 aa14.65□□□□□ -0.06
CHMP3-208ENST00000486404 ZNF618Q5T7W0 954 aa14.65□□□□□ -0.06
CHMP3-208ENST00000486404 WNT8BQ93098 351 aa14.65□□□□□ -0.06
CHMP3-208ENST00000486404 ZNF577Q9BSK1 485 aa14.65□□□□□ -0.06
CHMP3-208ENST00000486404 TTYH1Q9H313 450 aaPredicted RBP14.65□□□□□ -0.06
CHMP3-208ENST00000486404 SEMA6BQ9H3T3 888 aa14.65□□□□□ -0.06
CHMP3-208ENST00000486404 RNPEPQ9H4A4 650 aa14.65□□□□□ -0.06
CHMP3-208ENST00000486404 NRCAMQ92823 1304 aa14.65□□□□□ -0.06
CHMP3-208ENST00000486404 STK36Q9NRP7 1315 aa14.65□□□□□ -0.06
CHMP3-208ENST00000486404 RSPH10B2B2RC85 870 aa14.64□□□□□ -0.07
CHMP3-208ENST00000486404 FAM86B1E9PN63 330 aa14.64□□□□□ -0.07
CHMP3-208ENST00000486404 IPO5O00410 1097 aaKnown RBP14.64□□□□□ -0.07
CHMP3-208ENST00000486404 MEIS1O00470 390 aa14.64□□□□□ -0.07
CHMP3-208ENST00000486404 BACH1O14867 736 aa14.64□□□□□ -0.07
CHMP3-208ENST00000486404 TREHO43280 583 aa14.64□□□□□ -0.07
CHMP3-208ENST00000486404 CAND2O75155 1236 aa14.64□□□□□ -0.07
CHMP3-208ENST00000486404 CYP3A4P08684 503 aa14.64□□□□□ -0.07
CHMP3-208ENST00000486404 FAM86B2P0C5J1 330 aa14.64□□□□□ -0.07
CHMP3-208ENST00000486404 RSPH10BP0C881 870 aa14.64□□□□□ -0.07
CHMP3-208ENST00000486404 XBP1P17861 261 aa14.64□□□□□ -0.07
CHMP3-208ENST00000486404 PBX2P40425 430 aa14.64□□□□□ -0.07
CHMP3-208ENST00000486404 AK2P54819 239 aa14.64□□□□□ -0.07
CHMP3-208ENST00000486404 SCRN1Q12765 414 aa14.64□□□□□ -0.07
CHMP3-208ENST00000486404 ITGB3BPQ13352 177 aaPredicted RBP14.64□□□□□ -0.07
CHMP3-208ENST00000486404 HIC1Q14526 733 aa14.64□□□□□ -0.07
CHMP3-208ENST00000486404 GRIK4Q16099 956 aa14.64□□□□□ -0.07
CHMP3-208ENST00000486404 TRIM71Q2Q1W2 868 aaKnown RBP14.64□□□□□ -0.07
CHMP3-208ENST00000486404 CNKSR3Q6P9H4 555 aa14.64□□□□□ -0.07
CHMP3-208ENST00000486404 FAM177A1Q8N128 213 aaPredicted RBP14.64□□□□□ -0.07
CHMP3-208ENST00000486404 TNPO1Q92973 898 aaKnown RBP14.64□□□□□ -0.07
CHMP3-208ENST00000486404 C22orf23Q9BZE7 217 aa14.64□□□□□ -0.07
CHMP3-208ENST00000486404 TUBE1Q9UJT0 475 aa14.64□□□□□ -0.07
CHMP3-208ENST00000486404 TPCN1Q9ULQ1 816 aa14.64□□□□□ -0.07
CHMP3-208ENST00000486404 PCDHA4Q9UN74 947 aa14.64□□□□□ -0.07
CHMP3-208ENST00000486404 LOXHD1Q8IVV2 1947 aa14.64□□□□□ -0.07
CHMP3-208ENST00000486404 PFKFB2O60825 505 aa14.63□□□□□ -0.07
CHMP3-208ENST00000486404 NBNO60934 754 aa14.63□□□□□ -0.07
CHMP3-208ENST00000486404 FOSL2P15408 326 aa14.63□□□□□ -0.07
CHMP3-208ENST00000486404 IGBP1P78318 339 aa14.63□□□□□ -0.07
CHMP3-208ENST00000486404 PRR16Q569H4 304 aa14.63□□□□□ -0.07
CHMP3-208ENST00000486404 FAM160B1Q5W0V3 765 aa14.63□□□□□ -0.07
CHMP3-208ENST00000486404 TAF2Q6P1X5 1199 aa14.63□□□□□ -0.07
CHMP3-208ENST00000486404 RSPH3Q86UC2 560 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms