RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 CTAGE1Q96RT6 745 aa12.57□□□□□ -0.4
SNX21-211ENST00000486336 SEMA6BQ9H3T3 888 aa12.57□□□□□ -0.4
SNX21-211ENST00000486336 RNPEPQ9H4A4 650 aa12.57□□□□□ -0.4
SNX21-211ENST00000486336 AGO4Q9HCK5 861 aaKnown RBP12.57□□□□□ -0.4
SNX21-211ENST00000486336 JPH1Q9HDC5 661 aaPredicted RBP12.57□□□□□ -0.4
SNX21-211ENST00000486336 SLC9A2Q9UBY0 812 aa12.57□□□□□ -0.4
SNX21-211ENST00000486336 TPCN1Q9ULQ1 816 aa12.57□□□□□ -0.4
SNX21-211ENST00000486336 SLC4A7Q9Y6M7 1214 aa12.57□□□□□ -0.4
SNX21-211ENST00000486336 TRIP12Q14669 1992 aaPredicted RBP12.57□□□□□ -0.4
SNX21-211ENST00000486336 MEIS1O00470 390 aa12.56□□□□□ -0.4
SNX21-211ENST00000486336 TREHO43280 583 aa12.56□□□□□ -0.4
SNX21-211ENST00000486336 CDKL5O76039 1030 aa12.56□□□□□ -0.4
SNX21-211ENST00000486336 PFKMP08237 780 aa12.56□□□□□ -0.4
SNX21-211ENST00000486336 DNAJB2P25686 324 aa12.56□□□□□ -0.4
SNX21-211ENST00000486336 PBX2P40425 430 aa12.56□□□□□ -0.4
SNX21-211ENST00000486336 NEK4P51957 841 aa12.56□□□□□ -0.4
SNX21-211ENST00000486336 SCRN1Q12765 414 aa12.56□□□□□ -0.4
SNX21-211ENST00000486336 ZNF618Q5T7W0 954 aa12.56□□□□□ -0.4
SNX21-211ENST00000486336 RASIP1Q5U651 963 aa12.56□□□□□ -0.4
SNX21-211ENST00000486336 WNT8BQ93098 351 aa12.56□□□□□ -0.4
SNX21-211ENST00000486336 SMARCAD1Q9H4L7 1026 aa12.56□□□□□ -0.4
SNX21-211ENST00000486336 AZI2Q9H6S1 392 aa12.56□□□□□ -0.4
SNX21-211ENST00000486336 SH3GLB2Q9NR46 395 aa12.56□□□□□ -0.4
SNX21-211ENST00000486336 MSRAQ9UJ68 235 aa12.56□□□□□ -0.4
SNX21-211ENST00000486336 LAMA3Q16787 3333 aa12.56□□□□□ -0.4
SNX21-211ENST00000486336 SCN5AQ14524 2016 aa12.55□□□□□ -0.4
SNX21-211ENST00000486336 SZT2Q5T011 3432 aa12.55□□□□□ -0.4
SNX21-211ENST00000486336 FAM86B1E9PN63 330 aa12.55□□□□□ -0.4
SNX21-211ENST00000486336 PFKFB2O60825 505 aa12.55□□□□□ -0.4
SNX21-211ENST00000486336 CYP3A4P08684 503 aa12.55□□□□□ -0.4
SNX21-211ENST00000486336 FAM86B2P0C5J1 330 aa12.55□□□□□ -0.4
SNX21-211ENST00000486336 RABGGTBP53611 331 aa12.55□□□□□ -0.4
SNX21-211ENST00000486336 ACTR2P61160 394 aa12.55□□□□□ -0.4
SNX21-211ENST00000486336 IGBP1P78318 339 aa12.55□□□□□ -0.4
SNX21-211ENST00000486336 ITGB3BPQ13352 177 aaPredicted RBP12.55□□□□□ -0.4
SNX21-211ENST00000486336 PRR16Q569H4 304 aa12.55□□□□□ -0.4
SNX21-211ENST00000486336 NIPA1Q7RTP0 329 aa12.55□□□□□ -0.4
SNX21-211ENST00000486336 NECAB1Q8N987 351 aa12.55□□□□□ -0.4
SNX21-211ENST00000486336 TIFAQ96CG3 184 aa12.55□□□□□ -0.4
SNX21-211ENST00000486336 VWCEQ96DN2 955 aa12.55□□□□□ -0.4
SNX21-211ENST00000486336 AIFM3Q96NN9 605 aa12.55□□□□□ -0.4
SNX21-211ENST00000486336 ZNF577Q9BSK1 485 aa12.55□□□□□ -0.4
SNX21-211ENST00000486336 ERAP1Q9NZ08 941 aa12.55□□□□□ -0.4
SNX21-211ENST00000486336 NFASCO94856 1347 aa12.55□□□□□ -0.4
SNX21-211ENST00000486336 RSPH10B2B2RC85 870 aa12.54□□□□□ -0.4
SNX21-211ENST00000486336 RBAK-RBAKDNI3L0D1 243 aa12.54□□□□□ -0.4
SNX21-211ENST00000486336 BACH1O14867 736 aa12.54□□□□□ -0.4
SNX21-211ENST00000486336 CTSHP09668 335 aa12.54□□□□□ -0.4
SNX21-211ENST00000486336 RSPH10BP0C881 870 aa12.54□□□□□ -0.4
SNX21-211ENST00000486336 ATP2A2P16615 1042 aaKnown RBP12.54□□□□□ -0.4
SNX21-211ENST00000486336 PPFIA1Q13136 1202 aa12.54□□□□□ -0.4
SNX21-211ENST00000486336 TRIM71Q2Q1W2 868 aaKnown RBP12.54□□□□□ -0.4
SNX21-211ENST00000486336 SERINC5Q86VE9 423 aa12.54□□□□□ -0.4
SNX21-211ENST00000486336 BLIDQ8IZY5 108 aa12.54□□□□□ -0.4
SNX21-211ENST00000486336 PBX4Q9BYU1 374 aa12.54□□□□□ -0.4
SNX21-211ENST00000486336 NKX2-4Q9H2Z4 354 aa12.54□□□□□ -0.4
SNX21-211ENST00000486336 TTYH1Q9H313 450 aaPredicted RBP12.54□□□□□ -0.4
SNX21-211ENST00000486336 TCEAL9Q9UHQ7 104 aa12.54□□□□□ -0.4
SNX21-211ENST00000486336 PCDHA4Q9UN74 947 aa12.54□□□□□ -0.4
SNX21-211ENST00000486336 KCNJ14Q9UNX9 436 aa12.54□□□□□ -0.4
SNX21-211ENST00000486336 TRPC6Q9Y210 931 aa12.54□□□□□ -0.4
SNX21-211ENST00000486336 IPO5O00410 1097 aaKnown RBP12.53□□□□□ -0.4
SNX21-211ENST00000486336 NBNO60934 754 aa12.53□□□□□ -0.4
SNX21-211ENST00000486336 PARNO95453 639 aaKnown RBP12.53□□□□□ -0.4
SNX21-211ENST00000486336 XBP1P17861 261 aa12.53□□□□□ -0.4
SNX21-211ENST00000486336 KCNJ6P48051 423 aa12.53□□□□□ -0.4
SNX21-211ENST00000486336 STAT5BP51692 787 aa12.53□□□□□ -0.4
SNX21-211ENST00000486336 RBL2Q08999 1139 aa12.53□□□□□ -0.4
SNX21-211ENST00000486336 RAB30Q15771 203 aa12.53□□□□□ -0.4
SNX21-211ENST00000486336 GRIK4Q16099 956 aa12.53□□□□□ -0.4
SNX21-211ENST00000486336 LMBR1Q8WVP7 490 aa12.53□□□□□ -0.4
SNX21-211ENST00000486336 GUCD1Q96NT3 240 aa12.53□□□□□ -0.4
SNX21-211ENST00000486336 PCYT2Q99447 389 aa12.53□□□□□ -0.4
SNX21-211ENST00000486336 CDX2Q99626 313 aaPredicted RBP12.53□□□□□ -0.4
SNX21-211ENST00000486336 ZNF576Q9H609 170 aa12.53□□□□□ -0.4
SNX21-211ENST00000486336 ORC3Q9UBD5 711 aaPredicted RBP12.53□□□□□ -0.4
SNX21-211ENST00000486336 KAT6AQ92794 2004 aa12.53□□□□□ -0.4
SNX21-211ENST00000486336 NRCAMQ92823 1304 aa12.53□□□□□ -0.4
SNX21-211ENST00000486336 IGLV3-22A0A075B6J6 115 aa12.52□□□□□ -0.41
SNX21-211ENST00000486336 LGR5O75473 907 aa12.52□□□□□ -0.41
SNX21-211ENST00000486336 INSRRP14616 1297 aa12.52□□□□□ -0.41
SNX21-211ENST00000486336 MYOGP15173 224 aa12.52□□□□□ -0.41
SNX21-211ENST00000486336 FOSBP53539 338 aa12.52□□□□□ -0.41
SNX21-211ENST00000486336 SETQ01105 290 aaPredicted RBP12.52□□□□□ -0.41
SNX21-211ENST00000486336 GPNMBQ14956 572 aa12.52□□□□□ -0.41
SNX21-211ENST00000486336 ME3Q16798 604 aa12.52□□□□□ -0.41
SNX21-211ENST00000486336 FAM160B1Q5W0V3 765 aa12.52□□□□□ -0.41
SNX21-211ENST00000486336 MIS18BP1Q6P0N0 1132 aa12.52□□□□□ -0.41
SNX21-211ENST00000486336 CNKSR3Q6P9H4 555 aa12.52□□□□□ -0.41
SNX21-211ENST00000486336 RUFY4Q6ZNE9 571 aa12.52□□□□□ -0.41
SNX21-211ENST00000486336 TRMT1LQ7Z2T5 733 aaKnown RBP12.52□□□□□ -0.41
SNX21-211ENST00000486336 TBCKQ8TEA7 893 aa12.52□□□□□ -0.41
SNX21-211ENST00000486336 CRYGNQ8WXF5 182 aa12.52□□□□□ -0.41
SNX21-211ENST00000486336 MYLIPQ8WY64 445 aa12.52□□□□□ -0.41
SNX21-211ENST00000486336 TNPO1Q92973 898 aaKnown RBP12.52□□□□□ -0.41
SNX21-211ENST00000486336 C22orf23Q9BZE7 217 aa12.52□□□□□ -0.41
SNX21-211ENST00000486336 SLC28A3Q9HAS3 691 aa12.52□□□□□ -0.41
SNX21-211ENST00000486336 TBC1D22BQ9NU19 505 aa12.52□□□□□ -0.41
SNX21-211ENST00000486336 STXBP5LQ9Y2K9 1186 aa12.52□□□□□ -0.41
SNX21-211ENST00000486336 YBX2Q9Y2T7 364 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms