RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 FAM90A27PA6NNH2 459 aa8.37□□□□□ -1.07
RTN4-214ENST00000486085 CLASP2O75122 1294 aaKnown RBP8.37□□□□□ -1.07
RTN4-214ENST00000486085 ZBTB48P10074 688 aaPredicted RBP8.37□□□□□ -1.07
RTN4-214ENST00000486085 PMLP29590 882 aa8.37□□□□□ -1.07
RTN4-214ENST00000486085 NCKAP1LP55160 1127 aa8.37□□□□□ -1.07
RTN4-214ENST00000486085 IL2P60568 153 aa8.37□□□□□ -1.07
RTN4-214ENST00000486085 NOSTRINQ8IVI9 506 aa8.37□□□□□ -1.07
RTN4-214ENST00000486085 CHTF18Q8WVB6 975 aa8.37□□□□□ -1.07
RTN4-214ENST00000486085 MCOLN1Q9GZU1 580 aa8.37□□□□□ -1.07
RTN4-214ENST00000486085 H7C1D1 291 aa8.36□□□□□ -1.07
RTN4-214ENST00000486085 PEX10O60683 326 aa8.36□□□□□ -1.07
RTN4-214ENST00000486085 HIP1RO75146 1068 aa8.36□□□□□ -1.07
RTN4-214ENST00000486085 ASGR2P07307 311 aa8.36□□□□□ -1.07
RTN4-214ENST00000486085 PTPN1P18031 435 aaKnown RBP8.36□□□□□ -1.07
RTN4-214ENST00000486085 POU3F3P20264 500 aaPredicted RBP8.36□□□□□ -1.07
RTN4-214ENST00000486085 MCTP1Q6DN14 999 aa8.36□□□□□ -1.07
RTN4-214ENST00000486085 AMIGO3Q86WK7 504 aa8.36□□□□□ -1.07
RTN4-214ENST00000486085 FAM126BQ8IXS8 530 aa8.36□□□□□ -1.07
RTN4-214ENST00000486085 SMC1BQ8NDV3 1235 aa8.36□□□□□ -1.07
RTN4-214ENST00000486085 ATL2Q8NHH9 583 aa8.36□□□□□ -1.07
RTN4-214ENST00000486085 SGPP1Q9BX95 441 aa8.36□□□□□ -1.07
RTN4-214ENST00000486085 CNTD2Q9H8S5 307 aa8.36□□□□□ -1.07
RTN4-214ENST00000486085 OXSMQ9NWU1 459 aa8.36□□□□□ -1.07
RTN4-214ENST00000486085 H2AFY2Q9P0M6 372 aaPredicted RBP8.36□□□□□ -1.07
RTN4-214ENST00000486085 EIF4G1Q04637 1599 aaKnown RBP8.35□□□□□ -1.07
RTN4-214ENST00000486085 hCG_2014768A0A024R1R8 64 aa8.35□□□□□ -1.07
RTN4-214ENST00000486085 NEMP1O14524 444 aa8.35□□□□□ -1.07
RTN4-214ENST00000486085 BUB1BO60566 1050 aaPredicted RBP8.35□□□□□ -1.07
RTN4-214ENST00000486085 CPEP16870 476 aa8.35□□□□□ -1.07
RTN4-214ENST00000486085 YBX3P16989 372 aaKnown RBP eCLIP8.35□□□□□ -1.072e-23■□□□□ 9.5
RTN4-214ENST00000486085 STAT5AP42229 794 aa8.35□□□□□ -1.07
RTN4-214ENST00000486085 ID4P47928 161 aa8.35□□□□□ -1.07
RTN4-214ENST00000486085 TMEM132BQ14DG7 1078 aa8.35□□□□□ -1.07
RTN4-214ENST00000486085 SEC23AQ15436 765 aa8.35□□□□□ -1.07
RTN4-214ENST00000486085 PAN2Q504Q3 1202 aaKnown RBP8.35□□□□□ -1.07
RTN4-214ENST00000486085 ETV3LQ6ZN32 361 aa8.35□□□□□ -1.07
RTN4-214ENST00000486085 LDHDQ86WU2 507 aa8.35□□□□□ -1.07
RTN4-214ENST00000486085 DDX42Q86XP3 938 aaKnown RBP eCLIP8.35□□□□□ -1.078e-7■■□□□ 11.5
RTN4-214ENST00000486085 TOE1Q96GM8 510 aaKnown RBP8.35□□□□□ -1.07
RTN4-214ENST00000486085 BRINP2Q9C0B6 783 aa8.35□□□□□ -1.07
RTN4-214ENST00000486085 DTLQ9NZJ0 730 aa8.35□□□□□ -1.07
RTN4-214ENST00000486085 MBD1Q9UIS9 605 aaPredicted RBP8.35□□□□□ -1.07
RTN4-214ENST00000486085 ATP8A1Q9Y2Q0 1164 aa8.35□□□□□ -1.07
RTN4-214ENST00000486085 NOP58Q9Y2X3 529 aaKnown RBP8.35□□□□□ -1.07
RTN4-214ENST00000486085 SMARCA4P51532 1647 aa8.34□□□□□ -1.07
RTN4-214ENST00000486085 TEX51A0A1B0GUA7 166 aa8.34□□□□□ -1.07
RTN4-214ENST00000486085 ACOT7O00154 380 aa8.34□□□□□ -1.07
RTN4-214ENST00000486085 DVL2O14641 736 aa8.34□□□□□ -1.07
RTN4-214ENST00000486085 FKBP9O95302 570 aa8.34□□□□□ -1.07
RTN4-214ENST00000486085 GJA4P35212 333 aa8.34□□□□□ -1.07
RTN4-214ENST00000486085 ADCYAP1R1P41586 468 aa8.34□□□□□ -1.07
RTN4-214ENST00000486085 CDR1P51861 262 aa8.34□□□□□ -1.07
RTN4-214ENST00000486085 KPNA1P52294 538 aaPredicted RBP8.34□□□□□ -1.07
RTN4-214ENST00000486085 IGBP1P78318 339 aa8.34□□□□□ -1.07
RTN4-214ENST00000486085 ZNF174Q15697 407 aa8.34□□□□□ -1.07
RTN4-214ENST00000486085 CD300LDQ6UXZ3 194 aa8.34□□□□□ -1.07
RTN4-214ENST00000486085 FKBP9P1Q75LS8 142 aa8.34□□□□□ -1.07
RTN4-214ENST00000486085 MIB1Q86YT6 1006 aa8.34□□□□□ -1.07
RTN4-214ENST00000486085 FAM26EQ8N5C1 309 aa8.34□□□□□ -1.07
RTN4-214ENST00000486085 FBXO15Q8NCQ5 510 aaPredicted RBP8.34□□□□□ -1.07
RTN4-214ENST00000486085 DLG3Q92796 817 aa8.34□□□□□ -1.07
RTN4-214ENST00000486085 DDX11Q96FC9 970 aa8.34□□□□□ -1.07
RTN4-214ENST00000486085 TTC1Q99614 292 aa8.34□□□□□ -1.07
RTN4-214ENST00000486085 IFT22Q9H7X7 185 aa8.34□□□□□ -1.07
RTN4-214ENST00000486085 B3GALT1Q9Y5Z6 326 aa8.34□□□□□ -1.07
RTN4-214ENST00000486085 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.33□□□□□ -1.08
RTN4-214ENST00000486085 EYA4O95677 639 aa8.33□□□□□ -1.08
RTN4-214ENST00000486085 LRG1P02750 347 aa8.33□□□□□ -1.08
RTN4-214ENST00000486085 NCAM1P13591 858 aa8.33□□□□□ -1.08
RTN4-214ENST00000486085 FAHP16930 419 aa8.33□□□□□ -1.08
RTN4-214ENST00000486085 BPIP17213 487 aa8.33□□□□□ -1.08
RTN4-214ENST00000486085 SLC9A1P19634 815 aa8.33□□□□□ -1.08
RTN4-214ENST00000486085 FBLN1P23142 703 aa8.33□□□□□ -1.08
RTN4-214ENST00000486085 MC3RP41968 323 aa8.33□□□□□ -1.08
RTN4-214ENST00000486085 KIF11P52732 1056 aa8.33□□□□□ -1.08
RTN4-214ENST00000486085 XP32Q5T750 250 aa8.33□□□□□ -1.08
RTN4-214ENST00000486085 CREB3L3Q68CJ9 461 aa8.33□□□□□ -1.08
RTN4-214ENST00000486085 KIAA1958Q8N8K9 716 aa8.33□□□□□ -1.08
RTN4-214ENST00000486085 TTLL11Q8NHH1 800 aa8.33□□□□□ -1.08
RTN4-214ENST00000486085 KCNN1Q92952 543 aa8.33□□□□□ -1.08
RTN4-214ENST00000486085 PCIF1Q9H4Z3 704 aa8.33□□□□□ -1.08
RTN4-214ENST00000486085 KCNH7Q9NS40 1196 aa8.33□□□□□ -1.08
RTN4-214ENST00000486085 SPTLC3Q9NUV7 552 aa8.33□□□□□ -1.08
RTN4-214ENST00000486085 MCM8Q9UJA3 840 aa8.33□□□□□ -1.08
RTN4-214ENST00000486085 CECR2Q9BXF3 1484 aa8.32□□□□□ -1.08
RTN4-214ENST00000486085 IRS2Q9Y4H2 1338 aa8.32□□□□□ -1.08
RTN4-214ENST00000486085 PRAMEF25A6NGN4 478 aa8.32□□□□□ -1.08
RTN4-214ENST00000486085 C4BPAP04003 597 aaKnown RBP8.32□□□□□ -1.08
RTN4-214ENST00000486085 LSSP48449 732 aa8.32□□□□□ -1.08
RTN4-214ENST00000486085 EPHB3P54753 998 aa8.32□□□□□ -1.08
RTN4-214ENST00000486085 EVA1CP58658 441 aa8.32□□□□□ -1.08
RTN4-214ENST00000486085 ANAPC15P60006 121 aa8.32□□□□□ -1.08
RTN4-214ENST00000486085 CACNB2Q08289 660 aaPredicted RBP8.32□□□□□ -1.08
RTN4-214ENST00000486085 STAT4Q14765 748 aa8.32□□□□□ -1.08
RTN4-214ENST00000486085 TARBP2Q15633 366 aaKnown RBP8.32□□□□□ -1.08
RTN4-214ENST00000486085 TEPPQ6URK8 271 aa8.32□□□□□ -1.08
RTN4-214ENST00000486085 LHFPL2Q6ZUX7 228 aa8.32□□□□□ -1.08
RTN4-214ENST00000486085 PDGFDQ9GZP0 370 aaPredicted RBP8.32□□□□□ -1.08
RTN4-214ENST00000486085 PCDHA5Q9Y5H7 936 aa8.32□□□□□ -1.08
RTN4-214ENST00000486085 ZEB2O60315 1214 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms