RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 CHGBP05060 677 aa6.48□□□□□ -1.37
GCFC2-209ENST00000486016 CKMP06732 381 aa6.48□□□□□ -1.37
GCFC2-209ENST00000486016 COL6A2P12110 1019 aa6.48□□□□□ -1.37
GCFC2-209ENST00000486016 GRK2P25098 689 aa6.48□□□□□ -1.37
GCFC2-209ENST00000486016 GRK3P35626 688 aa6.48□□□□□ -1.37
GCFC2-209ENST00000486016 GPR85P60893 370 aa6.48□□□□□ -1.37
GCFC2-209ENST00000486016 RAB33AQ14088 237 aa6.48□□□□□ -1.37
GCFC2-209ENST00000486016 KIZQ2M2Z5 673 aa6.48□□□□□ -1.37
GCFC2-209ENST00000486016 PAN2Q504Q3 1202 aaKnown RBP6.48□□□□□ -1.37
GCFC2-209ENST00000486016 PHF19Q5T6S3 580 aa6.48□□□□□ -1.37
GCFC2-209ENST00000486016 YOD1Q5VVQ6 348 aaPredicted RBP6.48□□□□□ -1.37
GCFC2-209ENST00000486016 TRMT10BQ6PF06 316 aaKnown RBP6.48□□□□□ -1.37
GCFC2-209ENST00000486016 WWC2-AS2Q96NR7 200 aa6.48□□□□□ -1.37
GCFC2-209ENST00000486016 BLACEA4D250 179 aa6.47□□□□□ -1.37
GCFC2-209ENST00000486016 IQCA1LA6NCM1 817 aa6.47□□□□□ -1.37
GCFC2-209ENST00000486016 TACR2P21452 398 aa6.47□□□□□ -1.37
GCFC2-209ENST00000486016 NSMFQ6X4W1 530 aa6.47□□□□□ -1.37
GCFC2-209ENST00000486016 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.47□□□□□ -1.37
GCFC2-209ENST00000486016 ZNF669Q96BR6 464 aaPredicted RBP6.47□□□□□ -1.37
GCFC2-209ENST00000486016 MEGF9Q9H1U4 602 aa6.47□□□□□ -1.37
GCFC2-209ENST00000486016 SLITRK6Q9H5Y7 841 aa6.47□□□□□ -1.37
GCFC2-209ENST00000486016 KCND1Q9NSA2 647 aa6.47□□□□□ -1.37
GCFC2-209ENST00000486016 FTSJ1Q9UET6 329 aa6.47□□□□□ -1.37
GCFC2-209ENST00000486016 MSRB2Q9Y3D2 182 aa6.47□□□□□ -1.37
GCFC2-209ENST00000486016 TSC22D4Q9Y3Q8 395 aa6.47□□□□□ -1.37
GCFC2-209ENST00000486016 R3HCC1Q9Y3T6 440 aaKnown RBP6.47□□□□□ -1.37
GCFC2-209ENST00000486016 TCRBV5S4A2TA0A5A2 114 aa6.46□□□□□ -1.38
GCFC2-209ENST00000486016 PATE3B3GLJ2 98 aa6.46□□□□□ -1.38
GCFC2-209ENST00000486016 ACOT7O00154 380 aa6.46□□□□□ -1.38
GCFC2-209ENST00000486016 CYR61O00622 381 aa6.46□□□□□ -1.38
GCFC2-209ENST00000486016 CD276Q5ZPR3 534 aa6.46□□□□□ -1.38
GCFC2-209ENST00000486016 SLFN13Q68D06 897 aa6.46□□□□□ -1.38
GCFC2-209ENST00000486016 VASNQ6EMK4 673 aa6.46□□□□□ -1.38
GCFC2-209ENST00000486016 CHST13Q8NET6 341 aa6.46□□□□□ -1.38
GCFC2-209ENST00000486016 SH3RF2Q8TEC5 729 aa6.46□□□□□ -1.38
GCFC2-209ENST00000486016 AJUBAQ96IF1 538 aa6.46□□□□□ -1.38
GCFC2-209ENST00000486016 KCNJ15Q99712 375 aa6.46□□□□□ -1.38
GCFC2-209ENST00000486016 NPEPPSL1A6NEC2 478 aa6.45□□□□□ -1.38
GCFC2-209ENST00000486016 ADCY3O60266 1144 aa6.45□□□□□ -1.38
GCFC2-209ENST00000486016 B4GALT4O60513 344 aa6.45□□□□□ -1.38
GCFC2-209ENST00000486016 IL18BPO95998 194 aa6.45□□□□□ -1.38
GCFC2-209ENST00000486016 SOD2P04179 222 aa6.45□□□□□ -1.38
GCFC2-209ENST00000486016 SPIRE1Q08AE8 756 aa6.45□□□□□ -1.38
GCFC2-209ENST00000486016 R3HDM1Q15032 1099 aaKnown RBP6.45□□□□□ -1.38
GCFC2-209ENST00000486016 SMAD2Q15796 467 aaKnown RBP6.45□□□□□ -1.38
GCFC2-209ENST00000486016 SKIDA1Q1XH10 827 aa6.45□□□□□ -1.38
GCFC2-209ENST00000486016 CRB2Q5IJ48 1285 aa6.45□□□□□ -1.38
GCFC2-209ENST00000486016 ARHGEF18Q6ZSZ5 1173 aa6.45□□□□□ -1.38
GCFC2-209ENST00000486016 Q6ZUG5 572 aa6.45□□□□□ -1.38
GCFC2-209ENST00000486016 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.45□□□□□ -1.38
GCFC2-209ENST00000486016 IFNL3Q8IZI9 196 aa6.45□□□□□ -1.38
GCFC2-209ENST00000486016 Q8N1X5 172 aa6.45□□□□□ -1.38
GCFC2-209ENST00000486016 IPPKQ9H8X2 491 aa6.45□□□□□ -1.38
GCFC2-209ENST00000486016 BARX1Q9HBU1 254 aaPredicted RBP6.45□□□□□ -1.38
GCFC2-209ENST00000486016 TRAV20A0A0B4J274 112 aa6.44□□□□□ -1.38
GCFC2-209ENST00000486016 ZNF839A8K0R7 811 aa6.44□□□□□ -1.38
GCFC2-209ENST00000486016 WNT9AO14904 365 aa6.44□□□□□ -1.38
GCFC2-209ENST00000486016 CNOT4O95628 575 aaKnown RBP6.44□□□□□ -1.38
GCFC2-209ENST00000486016 GNAT1P11488 350 aa6.44□□□□□ -1.38
GCFC2-209ENST00000486016 PFKPQ01813 784 aa6.44□□□□□ -1.38
GCFC2-209ENST00000486016 SPRED1Q7Z699 444 aa6.44□□□□□ -1.38
GCFC2-209ENST00000486016 CIR1Q86X95 450 aaPredicted RBP6.44□□□□□ -1.38
GCFC2-209ENST00000486016 KATNBL1Q9H079 304 aa6.44□□□□□ -1.38
GCFC2-209ENST00000486016 KLC2Q9H0B6 622 aa6.44□□□□□ -1.38
GCFC2-209ENST00000486016 ZFP69BQ9UJL9 534 aa6.44□□□□□ -1.38
GCFC2-209ENST00000486016 DSEQ9UL01 958 aa6.44□□□□□ -1.38
GCFC2-209ENST00000486016 ZDHHC9Q9Y397 364 aa6.44□□□□□ -1.38
GCFC2-209ENST00000486016 ENO2P09104 434 aaPredicted RBP6.43□□□□□ -1.38
GCFC2-209ENST00000486016 CSF2RBP32927 897 aa6.43□□□□□ -1.38
GCFC2-209ENST00000486016 ACVRL1P37023 503 aa6.43□□□□□ -1.38
GCFC2-209ENST00000486016 IFRD2Q12894 506 aaPredicted RBP6.43□□□□□ -1.38
GCFC2-209ENST00000486016 KCTD1Q719H9 257 aa6.43□□□□□ -1.38
GCFC2-209ENST00000486016 LRRC47Q8N1G4 583 aaKnown RBP6.43□□□□□ -1.38
GCFC2-209ENST00000486016 SH3RF3Q8TEJ3 882 aaPredicted RBP6.43□□□□□ -1.38
GCFC2-209ENST00000486016 FAM47E-STBD1D6RA91 191 aa6.42□□□□□ -1.38
GCFC2-209ENST00000486016 SPATC1Q76KD6 591 aa6.42□□□□□ -1.38
GCFC2-209ENST00000486016 STPG3Q8N7X2 389 aa6.42□□□□□ -1.38
GCFC2-209ENST00000486016 Q8TCH9 128 aa6.42□□□□□ -1.38
GCFC2-209ENST00000486016 SPATA9Q9BWV2 254 aa6.42□□□□□ -1.38
GCFC2-209ENST00000486016 ARHGAP20Q9P2F6 1191 aa6.42□□□□□ -1.38
GCFC2-209ENST00000486016 CCDC9Q9Y3X0 531 aaKnown RBP6.42□□□□□ -1.38
GCFC2-209ENST00000486016 NUB1Q9Y5A7 615 aa6.42□□□□□ -1.38
GCFC2-209ENST00000486016 SLC4A7Q9Y6M7 1214 aa6.42□□□□□ -1.38
GCFC2-209ENST00000486016 C6orf222P0C671 652 aaPredicted RBP6.41□□□□□ -1.38
GCFC2-209ENST00000486016 GLRBP48167 497 aa6.41□□□□□ -1.38
GCFC2-209ENST00000486016 CRIP3Q6Q6R5 217 aa6.41□□□□□ -1.38
GCFC2-209ENST00000486016 CD244Q9BZW8 370 aa6.41□□□□□ -1.38
GCFC2-209ENST00000486016 SEC61A2Q9H9S3 476 aa6.41□□□□□ -1.38
GCFC2-209ENST00000486016 TRAF6Q9Y4K3 522 aa6.41□□□□□ -1.38
GCFC2-209ENST00000486016 FAM90A27PA6NNH2 459 aa6.4□□□□□ -1.38
GCFC2-209ENST00000486016 FOXB2Q5VYV0 432 aa6.4□□□□□ -1.38
GCFC2-209ENST00000486016 USP51Q70EK9 711 aa6.4□□□□□ -1.38
GCFC2-209ENST00000486016 REXO1L1PQ8IX06 675 aa6.4□□□□□ -1.38
GCFC2-209ENST00000486016 KISS1RQ969F8 398 aaPredicted RBP6.4□□□□□ -1.38
GCFC2-209ENST00000486016 ZNF623O75123 536 aa6.39□□□□□ -1.39
GCFC2-209ENST00000486016 FBXO21O94952 628 aa6.39□□□□□ -1.39
GCFC2-209ENST00000486016 AMY2AP04746 511 aa6.39□□□□□ -1.39
GCFC2-209ENST00000486016 AMY2BP19961 511 aa6.39□□□□□ -1.39
GCFC2-209ENST00000486016 DBPQ10586 325 aaPredicted RBP6.39□□□□□ -1.39
GCFC2-209ENST00000486016 ZNF585AQ6P3V2 769 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms