RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 GRB14Q14449 540 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 LRRC41Q15345 812 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 ANO1Q5XXA6 986 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 HGSNATQ68CP4 663 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 ANKRD34AQ69YU3 496 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 PHLDB3Q6NSJ2 640 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 TRIM42Q8IWZ5 723 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 NXPE3Q969Y0 559 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 FERMT2Q96AC1 680 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 ZKSCAN3Q9BRR0 538 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 MROH7-TTC4A0A0A0MT08 1334 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 REV3LO60673 3130 aa8.17□□□□□ -1.1
SMC4-217ENST00000485867 KIAA1324LA8MWY0 1029 aaPredicted RBP8.16□□□□□ -1.1
SMC4-217ENST00000485867 GRXCR1A8MXD5 290 aa8.16□□□□□ -1.1
SMC4-217ENST00000485867 C19orf81C9J6K1 198 aa8.16□□□□□ -1.1
SMC4-217ENST00000485867 SEPT4O43236 478 aa8.16□□□□□ -1.1
SMC4-217ENST00000485867 VAMP4O75379 141 aa8.16□□□□□ -1.1
SMC4-217ENST00000485867 PHKA1P46020 1223 aa8.16□□□□□ -1.1
SMC4-217ENST00000485867 PREPP48147 710 aa8.16□□□□□ -1.1
SMC4-217ENST00000485867 KCNQ1P51787 676 aa8.16□□□□□ -1.1
SMC4-217ENST00000485867 TFF2Q03403 129 aa8.16□□□□□ -1.1
SMC4-217ENST00000485867 WDR78Q5VTH9 848 aa8.16□□□□□ -1.1
SMC4-217ENST00000485867 RNF43Q68DV7 783 aa8.16□□□□□ -1.1
SMC4-217ENST00000485867 VN1R5Q7Z5H4 357 aa8.16□□□□□ -1.1
SMC4-217ENST00000485867 DZIP1Q86YF9 867 aaKnown RBP8.16□□□□□ -1.1
SMC4-217ENST00000485867 FAM20CQ8IXL6 584 aa8.16□□□□□ -1.1
SMC4-217ENST00000485867 SLC7A3Q8WY07 619 aa8.16□□□□□ -1.1
SMC4-217ENST00000485867 OSMRQ99650 979 aa8.16□□□□□ -1.1
SMC4-217ENST00000485867 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.16□□□□□ -1.18e-18■□□□□ 10.5
SMC4-217ENST00000485867 SRCIN1Q9C0H9 1055 aa8.16□□□□□ -1.1
SMC4-217ENST00000485867 DENND2AQ9ULE3 1009 aa8.16□□□□□ -1.1
SMC4-217ENST00000485867 RABGAP1Q9Y3P9 1069 aa8.16□□□□□ -1.1
SMC4-217ENST00000485867 FANCIQ9NVI1 1328 aa8.15□□□□□ -1.1
SMC4-217ENST00000485867 GPR75-ASB3A0A0A6YYF3 556 aa8.15□□□□□ -1.1
SMC4-217ENST00000485867 FAM86C2PA6NEL3 165 aa8.15□□□□□ -1.1
SMC4-217ENST00000485867 EYA2O00167 538 aa8.15□□□□□ -1.1
SMC4-217ENST00000485867 FZD6O60353 706 aa8.15□□□□□ -1.1
SMC4-217ENST00000485867 PHACTR2O75167 634 aa8.15□□□□□ -1.1
SMC4-217ENST00000485867 ASNSP08243 561 aa8.15□□□□□ -1.1
SMC4-217ENST00000485867 MRE11P49959 708 aa8.15□□□□□ -1.1
SMC4-217ENST00000485867 CCNA1P78396 465 aa8.15□□□□□ -1.1
SMC4-217ENST00000485867 JAG1P78504 1218 aa8.15□□□□□ -1.1
SMC4-217ENST00000485867 C19orf57Q0VDD7 668 aa8.15□□□□□ -1.1
SMC4-217ENST00000485867 AAK1Q2M2I8 961 aa8.15□□□□□ -1.1
SMC4-217ENST00000485867 SHROOM1Q2M3G4 852 aaPredicted RBP8.15□□□□□ -1.1
SMC4-217ENST00000485867 FAM47AQ5JRC9 791 aa8.15□□□□□ -1.1
SMC4-217ENST00000485867 RASIP1Q5U651 963 aa8.15□□□□□ -1.1
SMC4-217ENST00000485867 SLC4A10Q6U841 1118 aa8.15□□□□□ -1.1
SMC4-217ENST00000485867 CCDC129Q6ZRS4 1044 aa8.15□□□□□ -1.1
SMC4-217ENST00000485867 ZGPATQ8N5A5 531 aaKnown RBP8.15□□□□□ -1.1
SMC4-217ENST00000485867 SNX29Q8TEQ0 813 aa8.15□□□□□ -1.1
SMC4-217ENST00000485867 BSNDQ8WZ55 320 aa8.15□□□□□ -1.1
SMC4-217ENST00000485867 C1orf115Q9H7X2 142 aa8.15□□□□□ -1.1
SMC4-217ENST00000485867 GNL3LQ9NVN8 582 aaKnown RBP8.15□□□□□ -1.1
SMC4-217ENST00000485867 HERC5Q9UII4 1024 aaKnown RBP8.15□□□□□ -1.1
SMC4-217ENST00000485867 FOXD3Q9UJU5 478 aaPredicted RBP8.15□□□□□ -1.1
SMC4-217ENST00000485867 ZDBF2Q9HCK1 2354 aa8.15□□□□□ -1.1
SMC4-217ENST00000485867 ZNF318Q5VUA4 2279 aa8.15□□□□□ -1.1
SMC4-217ENST00000485867 A0A0G2JMZ2 1700 aa8.15□□□□□ -1.11
SMC4-217ENST00000485867 IL16Q14005 1332 aa8.14□□□□□ -1.11
SMC4-217ENST00000485867 MEGF11A6BM72 1044 aa8.14□□□□□ -1.11
SMC4-217ENST00000485867 PQBP1O60828 265 aaKnown RBP8.14□□□□□ -1.11
SMC4-217ENST00000485867 COBLO75128 1261 aa8.14□□□□□ -1.11
SMC4-217ENST00000485867 FAM13AO94988 1023 aa8.14□□□□□ -1.11
SMC4-217ENST00000485867 EDN3P14138 238 aa8.14□□□□□ -1.11
SMC4-217ENST00000485867 RFX5P48382 616 aaPredicted RBP8.14□□□□□ -1.11
SMC4-217ENST00000485867 ATP2B3Q16720 1220 aa8.14□□□□□ -1.11
SMC4-217ENST00000485867 TMEM240Q5SV17 173 aa8.14□□□□□ -1.11
SMC4-217ENST00000485867 OLFML2BQ68BL8 750 aa8.14□□□□□ -1.11
SMC4-217ENST00000485867 CLEC10AQ8IUN9 316 aa8.14□□□□□ -1.11
SMC4-217ENST00000485867 ZNF384Q8TF68 577 aa8.14□□□□□ -1.11
SMC4-217ENST00000485867 KRTAP4-12Q9BQ66 201 aa8.14□□□□□ -1.11
SMC4-217ENST00000485867 FAM83CQ9BQN1 747 aa8.14□□□□□ -1.11
SMC4-217ENST00000485867 DBNDD2Q9BQY9 259 aa8.14□□□□□ -1.11
SMC4-217ENST00000485867 RUSC1Q9BVN2 902 aa8.14□□□□□ -1.11
SMC4-217ENST00000485867 DNAJC18Q9H819 358 aa8.14□□□□□ -1.11
SMC4-217ENST00000485867 TMEM39AQ9NV64 488 aa8.14□□□□□ -1.11
SMC4-217ENST00000485867 IVNS1ABPQ9Y6Y0 642 aa8.14□□□□□ -1.11
SMC4-217ENST00000485867 XIRP2A4UGR9 3374 aa8.14□□□□□ -1.11
SMC4-217ENST00000485867 PRR19A6NJB7 356 aa8.13□□□□□ -1.11
SMC4-217ENST00000485867 ERC2O15083 957 aa8.13□□□□□ -1.11
SMC4-217ENST00000485867 SART1O43290 800 aaKnown RBP8.13□□□□□ -1.11
SMC4-217ENST00000485867 BMP3P12645 472 aa8.13□□□□□ -1.11
SMC4-217ENST00000485867 USP5P45974 858 aa8.13□□□□□ -1.11
SMC4-217ENST00000485867 ARL4DP49703 201 aa8.13□□□□□ -1.11
SMC4-217ENST00000485867 EHHADHQ08426 723 aa8.13□□□□□ -1.11
SMC4-217ENST00000485867 FAAP100Q0VG06 881 aa8.13□□□□□ -1.11
SMC4-217ENST00000485867 PPIGQ13427 754 aaKnown RBP eCLIP8.13□□□□□ -1.11
SMC4-217ENST00000485867 RASGRF1Q13972 1273 aa8.13□□□□□ -1.11
SMC4-217ENST00000485867 RAB30Q15771 203 aa8.13□□□□□ -1.11
SMC4-217ENST00000485867 CCDC27Q2M243 656 aa8.13□□□□□ -1.11
SMC4-217ENST00000485867 PEAR1Q5VY43 1037 aaPredicted RBP8.13□□□□□ -1.11
SMC4-217ENST00000485867 C16orf59Q7L2K0 433 aa8.13□□□□□ -1.11
SMC4-217ENST00000485867 ATG9AQ7Z3C6 839 aa8.13□□□□□ -1.11
SMC4-217ENST00000485867 SLC44A5Q8NCS7 719 aa8.13□□□□□ -1.11
SMC4-217ENST00000485867 BHLHE41Q9C0J9 482 aaPredicted RBP8.13□□□□□ -1.11
SMC4-217ENST00000485867 NKX2-4Q9H2Z4 354 aa8.13□□□□□ -1.11
SMC4-217ENST00000485867 BTBD7Q9P203 1132 aa8.13□□□□□ -1.11
SMC4-217ENST00000485867 ABCF2Q9UG63 623 aa8.13□□□□□ -1.11
SMC4-217ENST00000485867 TBX21Q9UL17 535 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms