RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 ZNF200P98182 395 aaPredicted RBP14.21□□□□□ -0.13
PTCD1-205ENST00000485746 PTK7Q13308 1070 aa14.21□□□□□ -0.13
PTCD1-205ENST00000485746 TMEM240Q5SV17 173 aa14.21□□□□□ -0.13
PTCD1-205ENST00000485746 ZNF365Q70YC5 407 aa14.21□□□□□ -0.13
PTCD1-205ENST00000485746 KRT25Q7Z3Z0 450 aa14.21□□□□□ -0.13
PTCD1-205ENST00000485746 DEFB128Q7Z7B8 93 aa14.21□□□□□ -0.13
PTCD1-205ENST00000485746 TBCKQ8TEA7 893 aa14.21□□□□□ -0.13
PTCD1-205ENST00000485746 LRCH3Q96II8 777 aa14.21□□□□□ -0.13
PTCD1-205ENST00000485746 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.21□□□□□ -0.13
PTCD1-205ENST00000485746 WNT8AQ9H1J5 351 aa14.21□□□□□ -0.13
PTCD1-205ENST00000485746 KIAA1217Q5T5P2 1943 aa14.2□□□□□ -0.14
PTCD1-205ENST00000485746 IPO5O00410 1097 aaKnown RBP14.2□□□□□ -0.14
PTCD1-205ENST00000485746 PITPNM1O00562 1244 aa14.2□□□□□ -0.14
PTCD1-205ENST00000485746 BACH1O14867 736 aa14.2□□□□□ -0.14
PTCD1-205ENST00000485746 ST18O60284 1047 aa14.2□□□□□ -0.14
PTCD1-205ENST00000485746 CTDNEP1O95476 244 aa14.2□□□□□ -0.14
PTCD1-205ENST00000485746 ACTR2P61160 394 aa14.2□□□□□ -0.14
PTCD1-205ENST00000485746 NONOQ15233 471 aaKnown RBP eCLIP14.2□□□□□ -0.14
PTCD1-205ENST00000485746 CCDC83Q8IWF9 413 aa14.2□□□□□ -0.14
PTCD1-205ENST00000485746 DAGLBQ8NCG7 672 aa14.2□□□□□ -0.14
PTCD1-205ENST00000485746 TNPO1Q92973 898 aaKnown RBP14.2□□□□□ -0.14
PTCD1-205ENST00000485746 RNPEPQ9H4A4 650 aa14.2□□□□□ -0.14
PTCD1-205ENST00000485746 TBC1D22BQ9NU19 505 aa14.2□□□□□ -0.14
PTCD1-205ENST00000485746 SETD4Q9NVD3 440 aa14.2□□□□□ -0.14
PTCD1-205ENST00000485746 ERAP1Q9NZ08 941 aa14.2□□□□□ -0.14
PTCD1-205ENST00000485746 DNAH12Q6ZR08 3092 aa14.19□□□□□ -0.14
PTCD1-205ENST00000485746 ZBBXA8MT70 800 aa14.19□□□□□ -0.14
PTCD1-205ENST00000485746 MARCH6O60337 910 aa14.19□□□□□ -0.14
PTCD1-205ENST00000485746 IQCF3P0C7M6 154 aa14.19□□□□□ -0.14
PTCD1-205ENST00000485746 ACTN1P12814 892 aa14.19□□□□□ -0.14
PTCD1-205ENST00000485746 SELPP16109 830 aa14.19□□□□□ -0.14
PTCD1-205ENST00000485746 CIITAP33076 1130 aa14.19□□□□□ -0.14
PTCD1-205ENST00000485746 RFC2P35250 354 aa14.19□□□□□ -0.14
PTCD1-205ENST00000485746 KRT2P35908 639 aa14.19□□□□□ -0.14
PTCD1-205ENST00000485746 THPOP40225 353 aa14.19□□□□□ -0.14
PTCD1-205ENST00000485746 RBM25P49756 843 aaKnown RBP14.19□□□□□ -0.14
PTCD1-205ENST00000485746 ITGB3BPQ13352 177 aaPredicted RBP14.19□□□□□ -0.14
PTCD1-205ENST00000485746 RABEP1Q15276 862 aa14.19□□□□□ -0.14
PTCD1-205ENST00000485746 FAM160B1Q5W0V3 765 aa14.19□□□□□ -0.14
PTCD1-205ENST00000485746 MIS18BP1Q6P0N0 1132 aa14.19□□□□□ -0.14
PTCD1-205ENST00000485746 OTOP2Q7RTS6 562 aa14.19□□□□□ -0.14
PTCD1-205ENST00000485746 NSUN7Q8NE18 718 aaKnown RBP14.19□□□□□ -0.14
PTCD1-205ENST00000485746 AFAP1L1Q8TED9 768 aa14.19□□□□□ -0.14
PTCD1-205ENST00000485746 PHF20Q9BVI0 1012 aa14.19□□□□□ -0.14
PTCD1-205ENST00000485746 SH2B1Q9NRF2 756 aaPredicted RBP14.19□□□□□ -0.14
PTCD1-205ENST00000485746 TRPC6Q9Y210 931 aa14.19□□□□□ -0.14
PTCD1-205ENST00000485746 SAMM50Q9Y512 469 aa14.19□□□□□ -0.14
PTCD1-205ENST00000485746 GTF3C3Q9Y5Q9 886 aa14.19□□□□□ -0.14
PTCD1-205ENST00000485746 IGLV3-22A0A075B6J6 115 aa14.18□□□□□ -0.14
PTCD1-205ENST00000485746 TREHO43280 583 aa14.18□□□□□ -0.14
PTCD1-205ENST00000485746 JAK2O60674 1132 aa14.18□□□□□ -0.14
PTCD1-205ENST00000485746 PFKMP08237 780 aa14.18□□□□□ -0.14
PTCD1-205ENST00000485746 CKBP12277 381 aa14.18□□□□□ -0.14
PTCD1-205ENST00000485746 STAT5BP51692 787 aa14.18□□□□□ -0.14
PTCD1-205ENST00000485746 IGBP1P78318 339 aa14.18□□□□□ -0.14
PTCD1-205ENST00000485746 PPFIA1Q13136 1202 aa14.18□□□□□ -0.14
PTCD1-205ENST00000485746 INF2Q27J81 1249 aa14.18□□□□□ -0.14
PTCD1-205ENST00000485746 LETM2Q2VYF4 491 aa14.18□□□□□ -0.14
PTCD1-205ENST00000485746 LRRC8DQ7L1W4 858 aa14.18□□□□□ -0.14
PTCD1-205ENST00000485746 C16orf59Q7L2K0 433 aa14.18□□□□□ -0.14
PTCD1-205ENST00000485746 CKAP2LQ8IYA6 745 aa14.18□□□□□ -0.14
PTCD1-205ENST00000485746 FAM184AQ8NB25 1140 aa14.18□□□□□ -0.14
PTCD1-205ENST00000485746 CRYGNQ8WXF5 182 aa14.18□□□□□ -0.14
PTCD1-205ENST00000485746 GJB4Q9NTQ9 266 aa14.18□□□□□ -0.14
PTCD1-205ENST00000485746 NRCAMQ92823 1304 aa14.17□□□□□ -0.14
PTCD1-205ENST00000485746 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.17□□□□□ -0.14
PTCD1-205ENST00000485746 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.17□□□□□ -0.14
PTCD1-205ENST00000485746 GAS7O60861 476 aa14.17□□□□□ -0.14
PTCD1-205ENST00000485746 LGR5O75473 907 aa14.17□□□□□ -0.14
PTCD1-205ENST00000485746 PARNO95453 639 aaKnown RBP14.17□□□□□ -0.14
PTCD1-205ENST00000485746 FDPSP14324 419 aaKnown RBP14.17□□□□□ -0.14
PTCD1-205ENST00000485746 KRT76Q01546 638 aa14.17□□□□□ -0.14
PTCD1-205ENST00000485746 SAFBQ15424 915 aaKnown RBP eCLIP14.17□□□□□ -0.14
PTCD1-205ENST00000485746 GRIK4Q16099 956 aa14.17□□□□□ -0.14
PTCD1-205ENST00000485746 PIK3AP1Q6ZUJ8 805 aa14.17□□□□□ -0.14
PTCD1-205ENST00000485746 HERVK_113Q902F9 699 aa14.17□□□□□ -0.14
PTCD1-205ENST00000485746 DHX38Q92620 1227 aaKnown RBP14.17□□□□□ -0.14
PTCD1-205ENST00000485746 KIF2CQ99661 725 aa14.17□□□□□ -0.14
PTCD1-205ENST00000485746 TEKT3Q9BXF9 490 aa14.17□□□□□ -0.14
PTCD1-205ENST00000485746 ZNF302Q9NR11 478 aa14.17□□□□□ -0.14
PTCD1-205ENST00000485746 EMSYQ7Z589 1322 aa14.16□□□□□ -0.14
PTCD1-205ENST00000485746 POTEB3A0JP26 581 aa14.16□□□□□ -0.14
PTCD1-205ENST00000485746 RRN3P2A6NIE6 340 aa14.16□□□□□ -0.14
PTCD1-205ENST00000485746 CHMP2AO43633 222 aa14.16□□□□□ -0.14
PTCD1-205ENST00000485746 PSAPP07602 524 aa14.16□□□□□ -0.14
PTCD1-205ENST00000485746 SMAD3P84022 425 aaKnown RBP14.16□□□□□ -0.14
PTCD1-205ENST00000485746 HIC1Q14526 733 aa14.16□□□□□ -0.14
PTCD1-205ENST00000485746 ZNF618Q5T7W0 954 aa14.16□□□□□ -0.14
PTCD1-205ENST00000485746 LRCH2Q5VUJ6 765 aa14.16□□□□□ -0.14
PTCD1-205ENST00000485746 ZNF746Q6NUN9 644 aaPredicted RBP14.16□□□□□ -0.14
PTCD1-205ENST00000485746 SWSAP1Q6NVH7 229 aa14.16□□□□□ -0.14
PTCD1-205ENST00000485746 PDXDC2PQ6P474 469 aa14.16□□□□□ -0.14
PTCD1-205ENST00000485746 POTEBQ6S5H4 581 aa14.16□□□□□ -0.14
PTCD1-205ENST00000485746 PLPPR4Q7Z2D5 763 aa14.16□□□□□ -0.14
PTCD1-205ENST00000485746 TRMT1LQ7Z2T5 733 aaKnown RBP14.16□□□□□ -0.14
PTCD1-205ENST00000485746 RSPH3Q86UC2 560 aa14.16□□□□□ -0.14
PTCD1-205ENST00000485746 SERINC5Q86VE9 423 aa14.16□□□□□ -0.14
PTCD1-205ENST00000485746 OXER1Q8TDS5 423 aa14.16□□□□□ -0.14
PTCD1-205ENST00000485746 PCYT2Q99447 389 aa14.16□□□□□ -0.14
PTCD1-205ENST00000485746 NAP1L4Q99733 375 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms