RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 MRPS9P82933 396 aaKnown RBP10.66□□□□□ -0.7
CTSA-208ENST00000485627 CCDC173Q0VFZ6 552 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 PPP2R5CQ13362 524 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 STIM1Q13586 685 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 MORC3Q14149 939 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 MCM6Q14566 821 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 KCTD2Q14681 263 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 STXBP2Q15833 593 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 CT47A1Q5JQC4 288 aaPredicted RBP10.66□□□□□ -0.7
CTSA-208ENST00000485627 POTEBQ6S5H4 581 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 OTOP1Q7RTM1 612 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 MIER3Q7Z3K6 550 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 VSIG10LQ86VR7 867 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 KCTD17Q8N5Z5 321 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 GPRC5AQ8NFJ5 357 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 BRI3BPQ8WY22 251 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 PURBQ96QR8 312 aaKnown RBP10.66□□□□□ -0.7
CTSA-208ENST00000485627 MMP19Q99542 508 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 C7orf25Q9BPX7 421 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 NUDT12Q9BQG2 462 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 EIF2AK1Q9BQI3 630 aaKnown RBP10.66□□□□□ -0.7
CTSA-208ENST00000485627 POLR3CQ9BUI4 534 aaPredicted RBP10.66□□□□□ -0.7
CTSA-208ENST00000485627 AGO4Q9HCK5 861 aaKnown RBP10.66□□□□□ -0.7
CTSA-208ENST00000485627 EXOC1Q9NV70 894 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 PKD2L1Q9P0L9 805 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 RBPJLQ9UBG7 517 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 VAV3Q9UKW4 847 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 DNM3Q9UQ16 869 aa10.66□□□□□ -0.7
CTSA-208ENST00000485627 MANSC4A6NHS7 340 aaPredicted RBP10.65□□□□□ -0.7
CTSA-208ENST00000485627 DDX39AO00148 427 aaKnown RBP10.65□□□□□ -0.7
CTSA-208ENST00000485627 PEX10O60683 326 aa10.65□□□□□ -0.7
CTSA-208ENST00000485627 MED24O75448 989 aa10.65□□□□□ -0.7
CTSA-208ENST00000485627 PLA2G4BP0C869 781 aa10.65□□□□□ -0.7
CTSA-208ENST00000485627 FCER1AP12319 257 aa10.65□□□□□ -0.7
CTSA-208ENST00000485627 MUTP22033 750 aa10.65□□□□□ -0.7
CTSA-208ENST00000485627 PDE4DQ08499 809 aa10.65□□□□□ -0.7
CTSA-208ENST00000485627 SPIRE1Q08AE8 756 aa10.65□□□□□ -0.7
CTSA-208ENST00000485627 KCNB1Q14721 858 aa10.65□□□□□ -0.7
CTSA-208ENST00000485627 IQCB1Q15051 598 aa10.65□□□□□ -0.7
CTSA-208ENST00000485627 EPHA7Q15375 998 aa10.65□□□□□ -0.7
CTSA-208ENST00000485627 SHCBP1Q8NEM2 672 aa10.65□□□□□ -0.7
CTSA-208ENST00000485627 NEK9Q8TD19 979 aa10.65□□□□□ -0.7
CTSA-208ENST00000485627 ZNF296Q8WUU4 475 aaPredicted RBP10.65□□□□□ -0.7
CTSA-208ENST00000485627 CCDC102AQ96A19 550 aa10.65□□□□□ -0.7
CTSA-208ENST00000485627 MTRQ99707 1265 aa10.65□□□□□ -0.7
CTSA-208ENST00000485627 TRIM9Q9C026 710 aa10.65□□□□□ -0.7
CTSA-208ENST00000485627 TUFT1Q9NNX1 390 aa10.65□□□□□ -0.7
CTSA-208ENST00000485627 SAMM50Q9Y512 469 aa10.65□□□□□ -0.7
CTSA-208ENST00000485627 COL11A1P12107 1806 aaPredicted RBP10.65□□□□□ -0.71
CTSA-208ENST00000485627 POTEFA5A3E0 1075 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 E9PMD0 336 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 IKBKBO14920 756 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 EIF3JO75822 258 aaKnown RBP10.64□□□□□ -0.71
CTSA-208ENST00000485627 KRT18P05783 430 aaKnown RBP10.64□□□□□ -0.71
CTSA-208ENST00000485627 ALDH5A1P51649 535 aaPredicted RBP10.64□□□□□ -0.71
CTSA-208ENST00000485627 KRT76Q01546 638 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 MYL5Q02045 173 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 CNTN2Q02246 1040 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 CYP4A11Q02928 519 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 ECM1Q16610 540 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 Q3C1V9 767 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 KMT5BQ4FZB7 885 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 ZNF658Q5TYW1 1059 aaPredicted RBP10.64□□□□□ -0.71
CTSA-208ENST00000485627 CNNM4Q6P4Q7 775 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 POTEGQ6S5H5 508 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 POTEEQ6S8J3 1075 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.64□□□□□ -0.71
CTSA-208ENST00000485627 CATSPER3Q86XQ3 398 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 RASAL3Q86YV0 1011 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 TPH2Q8IWU9 490 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 DHX40Q8IX18 779 aaKnown RBP10.64□□□□□ -0.71
CTSA-208ENST00000485627 ANKRD13CQ8N6S4 541 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 DYDC2Q96IM9 177 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 INPP4AQ96PE3 977 aaPredicted RBP10.64□□□□□ -0.71
CTSA-208ENST00000485627 UNC45AQ9H3U1 944 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 TXNRD2Q9NNW7 524 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 BLOC1S4Q9NUP1 217 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 IVNS1ABPQ9Y6Y0 642 aa10.64□□□□□ -0.71
CTSA-208ENST00000485627 RBBP6Q7Z6E9 1792 aaKnown RBP10.64□□□□□ -0.71
CTSA-208ENST00000485627 MKI67P46013 3256 aaKnown RBP10.63□□□□□ -0.71
CTSA-208ENST00000485627 PVALEFA0A1B0GWK0 134 aa10.63□□□□□ -0.71
CTSA-208ENST00000485627 MYMKA6NI61 221 aa10.63□□□□□ -0.71
CTSA-208ENST00000485627 EML1O00423 815 aa10.63□□□□□ -0.71
CTSA-208ENST00000485627 RHOBTB3O94955 611 aa10.63□□□□□ -0.71
CTSA-208ENST00000485627 P4HBP07237 508 aaKnown RBP10.63□□□□□ -0.71
CTSA-208ENST00000485627 IDEP14735 1019 aa10.63□□□□□ -0.71
CTSA-208ENST00000485627 ERCC5P28715 1186 aaPredicted RBP10.63□□□□□ -0.71
CTSA-208ENST00000485627 SFNP31947 248 aa10.63□□□□□ -0.71
CTSA-208ENST00000485627 PPP1R2P41236 205 aa10.63□□□□□ -0.71
CTSA-208ENST00000485627 JAK3P52333 1124 aa10.63□□□□□ -0.71
CTSA-208ENST00000485627 INHBEP58166 350 aa10.63□□□□□ -0.71
CTSA-208ENST00000485627 TPD52L1Q16890 204 aaPredicted RBP10.63□□□□□ -0.71
CTSA-208ENST00000485627 KLHL10Q6JEL2 608 aa10.63□□□□□ -0.71
CTSA-208ENST00000485627 UNC13DQ70J99 1090 aa10.63□□□□□ -0.71
CTSA-208ENST00000485627 DYMQ7RTS9 669 aa10.63□□□□□ -0.71
CTSA-208ENST00000485627 GPBP1Q86WP2 473 aa10.63□□□□□ -0.71
CTSA-208ENST00000485627 CCDC65Q8IXS2 484 aa10.63□□□□□ -0.71
CTSA-208ENST00000485627 FAM43AQ8N2R8 423 aa10.63□□□□□ -0.71
CTSA-208ENST00000485627 LRRC15Q8TF66 581 aa10.63□□□□□ -0.71
CTSA-208ENST00000485627 DDX12PQ92771 950 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms