RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 HCN4Q9Y3Q4 1203 aa6.06□□□□□ -1.44
CCDC39-205ENST00000485055 TRIM17Q9Y577 477 aa6.06□□□□□ -1.44
CCDC39-205ENST00000485055 LCTP09848 1927 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 SLC15A5A6NIM6 579 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 FOSL1P15407 271 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 CACNB3P54284 484 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 BPIFB3P59826 476 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 SFSWAPQ12872 951 aaKnown RBP6.05□□□□□ -1.44
CCDC39-205ENST00000485055 ORC1Q13415 861 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 TRIM14Q14142 442 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 EML3Q32P44 896 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 COBLL1Q53SF7 1204 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 GPATCH4Q5T3I0 446 aaKnown RBP6.05□□□□□ -1.44
CCDC39-205ENST00000485055 TMEM179Q6ZVK1 233 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 RASGRP2Q7LDG7 609 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 PHTF2Q8N3S3 785 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 SHISA4Q96DD7 197 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 SEC16BQ96JE7 1060 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 SARGQ9BW04 601 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 SMYD2Q9NRG4 433 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 RAI14Q9P0K7 980 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 MCM8Q9UJA3 840 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 MAFFQ9ULX9 164 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 JAG2Q9Y219 1238 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 ZHX2Q9Y6X8 837 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 MAGEB6P1A0A0J9YX57 407 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 TSPY2A6NKD2 308 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 STRNO43815 780 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 TSPY3P0CV98 308 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 TSPY8P0CW00 308 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 CYP7A1P22680 504 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 PMLP29590 882 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 WEE1P30291 646 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 ZNF132P52740 706 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 NAP1L1P55209 391 aaKnown RBP6.05□□□□□ -1.44
CCDC39-205ENST00000485055 TSPY1Q01534 308 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 HLTFQ14527 1009 aaKnown RBP eCLIP6.05□□□□□ -1.44
CCDC39-205ENST00000485055 GFOD2Q3B7J2 385 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 C2orf27AQ580R0 203 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 FAM133BQ5BKY9 247 aaKnown RBP6.05□□□□□ -1.44
CCDC39-205ENST00000485055 AACSQ86V21 672 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 KBTBD3Q8NAB2 608 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 KCT2Q8NC54 265 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 SPDYE1Q8NFV5 336 aaPredicted RBP6.05□□□□□ -1.44
CCDC39-205ENST00000485055 PANK1Q8TE04 598 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 KIFC2Q96AC6 838 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 DMRTB1Q96MA1 342 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 DCP1AQ9NPI6 582 aaPredicted RBP6.05□□□□□ -1.44
CCDC39-205ENST00000485055 ECHDC1Q9NTX5 307 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 PAG1Q9NWQ8 432 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 ARPP21Q9UBL0 812 aaPredicted RBP6.05□□□□□ -1.44
CCDC39-205ENST00000485055 OGDHLQ9ULD0 1010 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 TMX2Q9Y320 296 aa6.05□□□□□ -1.44
CCDC39-205ENST00000485055 TRIM6-TRIM34B2RNG4 842 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 OPLAHO14841 1288 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 PDPK1O15530 556 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 UBXN2AP68543 259 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 JAG1P78504 1218 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 HMGN5P82970 282 aaKnown RBP6.04□□□□□ -1.44
CCDC39-205ENST00000485055 IFRD2Q12894 506 aaPredicted RBP6.04□□□□□ -1.44
CCDC39-205ENST00000485055 POTEEQ6S8J3 1075 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 C1orf122Q6ZSJ8 110 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 ZFPM2Q8WW38 1151 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 ATXN2LQ8WWM7 1075 aaKnown RBP6.04□□□□□ -1.44
CCDC39-205ENST00000485055 C22orf23Q9BZE7 217 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 ASCC2Q9H1I8 757 aaPredicted RBP6.04□□□□□ -1.44
CCDC39-205ENST00000485055 SH2D4AQ9H788 454 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 TCP11L1Q9NUJ3 509 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 NYAP2Q9P242 653 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 TBK1Q9UHD2 729 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 ADAMTS1Q9UHI8 967 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 FZD1Q9UP38 647 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 PCDHGA10Q9Y5H3 936 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 DGKBQ9Y6T7 804 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 SMAD7O15105 426 aaKnown RBP6.04□□□□□ -1.44
CCDC39-205ENST00000485055 GRK4P32298 578 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 OAZ1P54368 228 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 PURAQ00577 322 aaKnown RBP6.04□□□□□ -1.44
CCDC39-205ENST00000485055 ATP13A4Q4VNC1 1196 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 C16orf87Q6PH81 154 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 MIGA2Q7L4E1 593 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 SIAH1Q8IUQ4 282 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 PI4K2BQ8TCG2 481 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 SLX1AQ9BQ83 275 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 RBPJLQ9UBG7 517 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 TSR3Q9UJK0 312 aaKnown RBP6.04□□□□□ -1.44
CCDC39-205ENST00000485055 SCAF8Q9UPN6 1271 aaKnown RBP6.04□□□□□ -1.44
CCDC39-205ENST00000485055 CEP350Q5VT06 3117 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 HMGCRP04035 888 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 ZSCAN20P17040 1043 aaPredicted RBP6.04□□□□□ -1.44
CCDC39-205ENST00000485055 PSMC4P43686 418 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 PRSS12P56730 875 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 GRB14Q14449 540 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 GJC2Q5T442 439 aaPredicted RBP6.04□□□□□ -1.44
CCDC39-205ENST00000485055 NXNQ6DKJ4 435 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 MZT2AQ6P582 158 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 OTOP3Q7RTS5 596 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 GMCL1P1Q8NEA9 526 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 REPS2Q8NFH8 660 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 NUDT12Q9BQG2 462 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms