RNA–Protein interactions for RNA: ENST00000484767.5

SND1-211, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-211ENST00000484767 NDUFAB1O14561 156 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 MEFVO15553 781 aaPredicted RBP10.09□□□□□ -0.79
SND1-211ENST00000484767 RPS6KA4O75676 772 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 PALMO75781 387 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 NOL4O94818 638 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 NR1D1P20393 614 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 PRKCIP41743 596 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 CLK2P49760 499 aaKnown RBP10.09□□□□□ -0.79
SND1-211ENST00000484767 NUBP1P53384 320 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 NAP1L1P55209 391 aaKnown RBP10.09□□□□□ -0.79
SND1-211ENST00000484767 SETQ01105 290 aaPredicted RBP10.09□□□□□ -0.79
SND1-211ENST00000484767 GFPT1Q06210 699 aaPredicted RBP10.09□□□□□ -0.79
SND1-211ENST00000484767 TBC1D9BQ66K14 1250 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 MOXD1Q6UVY6 613 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 RUFY4Q6ZNE9 571 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 FRMD5Q7Z6J6 570 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 NBPF5PQ86XG9 351 aaPredicted RBP10.09□□□□□ -0.79
SND1-211ENST00000484767 SYCE1Q8N0S2 351 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 MARCH10Q8NA82 808 aaPredicted RBP10.09□□□□□ -0.79
SND1-211ENST00000484767 SCFD2Q8WU76 684 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 TGFBRAP1Q8WUH2 860 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 P3H4Q92791 437 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 ARL8AQ96BM9 186 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 PIGSQ96S52 555 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 LSM14BQ9BX40 385 aaKnown RBP10.09□□□□□ -0.79
SND1-211ENST00000484767 TANGO6Q9C0B7 1094 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 GANQ9H2C0 597 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 SLITRK6Q9H5Y7 841 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 TMBIM4Q9HC24 238 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 EPB41L5Q9HCM4 733 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 A1CFQ9NQ94 594 aaKnown RBP10.09□□□□□ -0.79
SND1-211ENST00000484767 PANK4Q9NVE7 773 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 BIN2Q9UBW5 565 aaPredicted RBP10.09□□□□□ -0.79
SND1-211ENST00000484767 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.09□□□□□ -0.79
SND1-211ENST00000484767 LRRC37AA6NMS7 1700 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 LOXHD1Q8IVV2 1947 aa10.09□□□□□ -0.79
SND1-211ENST00000484767 GAKO14976 1311 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 WTIPA6NIX2 430 aaPredicted RBP10.08□□□□□ -0.8
SND1-211ENST00000484767 CETN3O15182 167 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 TLR2O60603 784 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 PPP1R37O75864 691 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 KIF4AO95239 1232 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 GLI1P08151 1106 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 TM4SF1P30408 202 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 LSP1P33241 339 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 MDH1P40925 334 aaKnown RBP10.08□□□□□ -0.8
SND1-211ENST00000484767 MATR3P43243 847 aaKnown RBP eCLIP10.08□□□□□ -0.81e-6■■■□□ 17.4
SND1-211ENST00000484767 USP11P51784 963 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 MRPL12P52815 198 aaKnown RBP10.08□□□□□ -0.8
SND1-211ENST00000484767 SLC7A5Q01650 507 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 GUCY2DQ02846 1103 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 DDR1Q08345 913 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 KLHL30Q0D2K2 578 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 GRAPQ13588 217 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 RPS6KA1Q15418 735 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 PTGISQ16647 500 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 DYMQ7RTS9 669 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 VPS36Q86VN1 386 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 TEX2Q8IWB9 1127 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 OTUD6BQ8N6M0 293 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 PRPF38AQ8NAV1 312 aaKnown RBP10.08□□□□□ -0.8
SND1-211ENST00000484767 LINC00116Q8NCU8 138 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 GRAPLQ8TC17 118 aaPredicted RBP10.08□□□□□ -0.8
SND1-211ENST00000484767 TBC1D22AQ8WUA7 517 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 CASKIN2Q8WXE0 1202 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 DRC1Q96MC2 740 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 GDAP1L1Q96MZ0 367 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 ACTR5Q9H9F9 607 aaPredicted RBP10.08□□□□□ -0.8
SND1-211ENST00000484767 METTL14Q9HCE5 456 aaKnown RBP10.08□□□□□ -0.8
SND1-211ENST00000484767 SALL4Q9UJQ4 1053 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 NFU1Q9UMS0 254 aa10.08□□□□□ -0.8
SND1-211ENST00000484767 SPATA31A5Q5VU36 1347 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 SPATA31A7Q8IWB4 1347 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 LY75O60449 1722 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 CYP3A7-CYP3A51PA0A087WV96 503 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 IGKV6D-41A0A0C4DH26 115 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 GTPBP10A4D1E9 387 aaKnown RBP10.07□□□□□ -0.8
SND1-211ENST00000484767 ZNF233A6NK53 670 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 VGLL3A8MV65 326 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 SLC16A3O15427 465 aaKnown RBP10.07□□□□□ -0.8
SND1-211ENST00000484767 NCK2O43639 380 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 BUB1O43683 1085 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 FLOT1O75955 427 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 TRIM37O94972 964 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 PDHBP11177 359 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 IL1R1P14778 569 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 ATP2B4P23634 1241 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 CYP3A7P24462 503 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 KLRC1P26715 233 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 CARSP49589 748 aaKnown RBP10.07□□□□□ -0.8
SND1-211ENST00000484767 CDR1P51861 262 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 POLR2FP61218 127 aaKnown RBP10.07□□□□□ -0.8
SND1-211ENST00000484767 GPATCH4Q5T3I0 446 aaKnown RBP10.07□□□□□ -0.8
SND1-211ENST00000484767 CCDC91Q7Z6B0 441 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 CROCCP2Q86T23 111 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 TEX11Q8IYF3 940 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 RASGEF1CQ8N431 466 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 PIK3R5Q8WYR1 880 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 TBC1D5Q92609 795 aa10.07□□□□□ -0.8
SND1-211ENST00000484767 CUL5Q93034 780 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms