RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 SND1Q7KZF4 910 aaKnown RBP eCLIP5.52□□□□□ -1.53
SPTA1-206ENST00000484520 ARHGEF25Q86VW2 580 aa5.52□□□□□ -1.53
SPTA1-206ENST00000484520 REXO1Q8N1G1 1221 aaKnown RBP5.52□□□□□ -1.53
SPTA1-206ENST00000484520 TCP11L2Q8N4U5 519 aa5.52□□□□□ -1.53
SPTA1-206ENST00000484520 ZNF428Q96B54 188 aa5.52□□□□□ -1.53
SPTA1-206ENST00000484520 PLEKHF1Q96S99 279 aa5.52□□□□□ -1.53
SPTA1-206ENST00000484520 CHMP4AQ9BY43 222 aa5.52□□□□□ -1.53
SPTA1-206ENST00000484520 RNF38Q9H0F5 515 aa5.52□□□□□ -1.53
SPTA1-206ENST00000484520 PDLIM7Q9NR12 457 aa5.52□□□□□ -1.53
SPTA1-206ENST00000484520 DBR1Q9UK59 544 aaKnown RBP5.52□□□□□ -1.53
SPTA1-206ENST00000484520 SHPRHQ149N8 1683 aa5.51□□□□□ -1.53
SPTA1-206ENST00000484520 MEIS3P2A8K0S8 358 aa5.51□□□□□ -1.53
SPTA1-206ENST00000484520 H0Y8X5 98 aa5.51□□□□□ -1.53
SPTA1-206ENST00000484520 SHOXO15266 292 aa5.51□□□□□ -1.53
SPTA1-206ENST00000484520 FGF10O15520 208 aaPredicted RBP5.51□□□□□ -1.53
SPTA1-206ENST00000484520 HTATSF1O43719 755 aaKnown RBP5.51□□□□□ -1.53
SPTA1-206ENST00000484520 NOBOXO60393 691 aa5.51□□□□□ -1.53
SPTA1-206ENST00000484520 ASGR2P07307 311 aa5.51□□□□□ -1.53
SPTA1-206ENST00000484520 TNFRSF1AP19438 455 aa5.51□□□□□ -1.53
SPTA1-206ENST00000484520 TMPOP42166 694 aaKnown RBP5.51□□□□□ -1.53
SPTA1-206ENST00000484520 ZXDAP98168 799 aa5.51□□□□□ -1.53
SPTA1-206ENST00000484520 NFE2L2Q16236 605 aa5.51□□□□□ -1.53
SPTA1-206ENST00000484520 LRRFIP1Q32MZ4 808 aaKnown RBP5.51□□□□□ -1.53
SPTA1-206ENST00000484520 MEX3CQ5U5Q3 659 aaKnown RBP5.51□□□□□ -1.53
SPTA1-206ENST00000484520 DNAJC14Q6Y2X3 702 aaPredicted RBP5.51□□□□□ -1.53
SPTA1-206ENST00000484520 CCDC144CPQ8IYA2 1237 aa5.51□□□□□ -1.53
SPTA1-206ENST00000484520 CARFQ8N187 725 aa5.51□□□□□ -1.53
SPTA1-206ENST00000484520 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.51□□□□□ -1.53
SPTA1-206ENST00000484520 LRRC59Q96AG4 307 aaKnown RBP5.51□□□□□ -1.53
SPTA1-206ENST00000484520 SUCOQ9UBS9 1254 aaKnown RBP5.51□□□□□ -1.53
SPTA1-206ENST00000484520 TRPM3Q9HCF6 1732 aaPredicted RBP5.51□□□□□ -1.53
SPTA1-206ENST00000484520 STRCP1A6NGW2 1772 aa5.5□□□□□ -1.53
SPTA1-206ENST00000484520 AHDC1Q5TGY3 1603 aaPredicted RBP5.5□□□□□ -1.53
SPTA1-206ENST00000484520 ITGB3P05106 788 aa5.5□□□□□ -1.53
SPTA1-206ENST00000484520 PRKAR2BP31323 418 aa5.5□□□□□ -1.53
SPTA1-206ENST00000484520 ZNF165P49910 485 aa5.5□□□□□ -1.53
SPTA1-206ENST00000484520 APOBRQ0VD83 1088 aa5.5□□□□□ -1.53
SPTA1-206ENST00000484520 AMOTQ4VCS5 1084 aa5.5□□□□□ -1.53
SPTA1-206ENST00000484520 HSP90AB2PQ58FF8 381 aa5.5□□□□□ -1.53
SPTA1-206ENST00000484520 CYP2R1Q6VVX0 501 aa5.5□□□□□ -1.53
SPTA1-206ENST00000484520 CCDC146Q8IYE0 955 aa5.5□□□□□ -1.53
SPTA1-206ENST00000484520 ALG3Q92685 438 aa5.5□□□□□ -1.53
SPTA1-206ENST00000484520 SRRTQ9BXP5 876 aaKnown RBP5.5□□□□□ -1.53
SPTA1-206ENST00000484520 LNPKQ9C0E8 428 aa5.5□□□□□ -1.53
SPTA1-206ENST00000484520 RXFP1Q9HBX9 757 aa5.5□□□□□ -1.53
SPTA1-206ENST00000484520 BABAM1Q9NWV8 329 aa5.5□□□□□ -1.53
SPTA1-206ENST00000484520 SMPD4Q9NXE4 827 aa5.5□□□□□ -1.53
SPTA1-206ENST00000484520 ADAMTS1Q9UHI8 967 aa5.5□□□□□ -1.53
SPTA1-206ENST00000484520 SOS1Q07889 1333 aaPredicted RBP5.49□□□□□ -1.53
SPTA1-206ENST00000484520 OVOS2A0A0G2JMS6 1433 aa5.49□□□□□ -1.53
SPTA1-206ENST00000484520 NCAPD2Q15021 1401 aa5.49□□□□□ -1.53
SPTA1-206ENST00000484520 RIPK4P57078 832 aa5.49□□□□□ -1.53
SPTA1-206ENST00000484520 GJA9P57773 515 aa5.49□□□□□ -1.53
SPTA1-206ENST00000484520 GNAI1P63096 354 aa5.49□□□□□ -1.53
SPTA1-206ENST00000484520 SLFN5Q08AF3 891 aa5.49□□□□□ -1.53
SPTA1-206ENST00000484520 TDRD10Q5VZ19 366 aaKnown RBP5.49□□□□□ -1.53
SPTA1-206ENST00000484520 SULT6B1Q6IMI4 303 aa5.49□□□□□ -1.53
SPTA1-206ENST00000484520 USP48Q86UV5 1035 aa5.49□□□□□ -1.53
SPTA1-206ENST00000484520 TRMT2AQ8IZ69 625 aaKnown RBP5.49□□□□□ -1.53
SPTA1-206ENST00000484520 RTF1Q92541 710 aaKnown RBP5.49□□□□□ -1.53
SPTA1-206ENST00000484520 BRF1Q92994 677 aa5.49□□□□□ -1.53
SPTA1-206ENST00000484520 DHRS1Q96LJ7 313 aa5.49□□□□□ -1.53
SPTA1-206ENST00000484520 RBM15Q96T37 977 aaKnown RBP eCLIP5.49□□□□□ -1.533e-6■■■■□ 20.8
SPTA1-206ENST00000484520 BCAS3Q9H6U6 928 aa5.49□□□□□ -1.53
SPTA1-206ENST00000484520 IFT57Q9NWB7 429 aa5.49□□□□□ -1.53
SPTA1-206ENST00000484520 RCAN3Q9UKA8 241 aa5.49□□□□□ -1.53
SPTA1-206ENST00000484520 ALS2Q96Q42 1657 aa5.49□□□□□ -1.53
SPTA1-206ENST00000484520 RNF123Q5XPI4 1314 aa5.48□□□□□ -1.53
SPTA1-206ENST00000484520 MATN3O15232 486 aa5.48□□□□□ -1.53
SPTA1-206ENST00000484520 ACRP10323 421 aa5.48□□□□□ -1.53
SPTA1-206ENST00000484520 NOP2P46087 812 aaKnown RBP5.48□□□□□ -1.53
SPTA1-206ENST00000484520 CORO7P57737 925 aa5.48□□□□□ -1.53
SPTA1-206ENST00000484520 ZNF445P59923 1031 aa5.48□□□□□ -1.53
SPTA1-206ENST00000484520 NOL9Q5SY16 702 aaKnown RBP5.48□□□□□ -1.53
SPTA1-206ENST00000484520 DCAF15Q66K64 600 aa5.48□□□□□ -1.53
SPTA1-206ENST00000484520 B3GNT8Q7Z7M8 397 aa5.48□□□□□ -1.53
SPTA1-206ENST00000484520 NKD1Q969G9 470 aa5.48□□□□□ -1.53
SPTA1-206ENST00000484520 PTCHD1Q96NR3 888 aa5.48□□□□□ -1.53
SPTA1-206ENST00000484520 FCRL3Q96P31 734 aaPredicted RBP5.48□□□□□ -1.53
SPTA1-206ENST00000484520 NHSL1Q5SYE7 1610 aa5.48□□□□□ -1.53
SPTA1-206ENST00000484520 TBC1D8O95759 1140 aa5.47□□□□□ -1.53
SPTA1-206ENST00000484520 HSP90AB1P08238 724 aaKnown RBP5.47□□□□□ -1.53
SPTA1-206ENST00000484520 HMOX1P09601 288 aa5.47□□□□□ -1.53
SPTA1-206ENST00000484520 IFNGR1P15260 489 aa5.47□□□□□ -1.53
SPTA1-206ENST00000484520 PMLP29590 882 aa5.47□□□□□ -1.53
SPTA1-206ENST00000484520 L1CAMP32004 1257 aa5.47□□□□□ -1.53
SPTA1-206ENST00000484520 SARSP49591 514 aaKnown RBP5.47□□□□□ -1.53
SPTA1-206ENST00000484520 PLEKHO1Q53GL0 409 aaPredicted RBP5.47□□□□□ -1.53
SPTA1-206ENST00000484520 NLGN2Q8NFZ4 835 aa5.47□□□□□ -1.53
SPTA1-206ENST00000484520 RAPGEF4Q8WZA2 1011 aa5.47□□□□□ -1.53
SPTA1-206ENST00000484520 NOX5Q96PH1 765 aa5.47□□□□□ -1.53
SPTA1-206ENST00000484520 GP6Q9HCN6 339 aa5.47□□□□□ -1.53
SPTA1-206ENST00000484520 PRDM11Q9NQV5 511 aa5.47□□□□□ -1.53
SPTA1-206ENST00000484520 GGT7Q9UJ14 662 aa5.47□□□□□ -1.53
SPTA1-206ENST00000484520 RGPD1P0DJD0 1748 aa5.47□□□□□ -1.53
SPTA1-206ENST00000484520 RGPD8O14715 1765 aaPredicted RBP5.47□□□□□ -1.53
SPTA1-206ENST00000484520 FAM208AQ9UK61 1670 aaKnown RBP5.47□□□□□ -1.53
SPTA1-206ENST00000484520 PEAK1Q9H792 1746 aa5.46□□□□□ -1.54
SPTA1-206ENST00000484520 KIAA0232Q92628 1395 aa5.46□□□□□ -1.54
SPTA1-206ENST00000484520 MAP3K5Q99683 1374 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms