RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 ERMNQ8TAM6 284 aa21.67■■□□□ 1.06
LIMS2-215ENST00000484252 CAVIN3Q969G5 261 aa21.67■■□□□ 1.06
LIMS2-215ENST00000484252 ZBTB9Q96C00 473 aa21.67■■□□□ 1.06
LIMS2-215ENST00000484252 GDAP1L1Q96MZ0 367 aa21.67■■□□□ 1.06
LIMS2-215ENST00000484252 FGFBP2Q9BYJ0 223 aa21.67■■□□□ 1.06
LIMS2-215ENST00000484252 PCDHA1Q9Y5I3 950 aa21.67■■□□□ 1.06
LIMS2-215ENST00000484252 MYH4Q9Y623 1939 aa21.67■■□□□ 1.06
LIMS2-215ENST00000484252 GRID2IPA4D2P6 1211 aa21.67■■□□□ 1.06
LIMS2-215ENST00000484252 NCK2O43639 380 aa21.67■■□□□ 1.06
LIMS2-215ENST00000484252 CXCR5P32302 372 aa21.67■■□□□ 1.06
LIMS2-215ENST00000484252 NNTQ13423 1086 aa21.67■■□□□ 1.06
LIMS2-215ENST00000484252 EZH2Q15910 746 aaKnown RBP21.67■■□□□ 1.06
LIMS2-215ENST00000484252 HDAC7Q8WUI4 952 aa21.67■■□□□ 1.06
LIMS2-215ENST00000484252 DHX36Q9H2U1 1008 aaKnown RBP21.67■■□□□ 1.06
LIMS2-215ENST00000484252 NYAP2Q9P242 653 aa21.67■■□□□ 1.06
LIMS2-215ENST00000484252 USP17L15C9J2P7 530 aa21.66■■□□□ 1.06
LIMS2-215ENST00000484252 USP17L13C9JLJ4 530 aa21.66■■□□□ 1.06
LIMS2-215ENST00000484252 USP17L11C9JVI0 530 aa21.66■■□□□ 1.06
LIMS2-215ENST00000484252 USP17L18D6R9N7 530 aa21.66■■□□□ 1.06
LIMS2-215ENST00000484252 USP17L22D6RA61 530 aa21.66■■□□□ 1.06
LIMS2-215ENST00000484252 USP17L17D6RBQ6 530 aa21.66■■□□□ 1.06
LIMS2-215ENST00000484252 USP17L19D6RCP7 530 aa21.66■■□□□ 1.06
LIMS2-215ENST00000484252 USP17L20D6RJB6 530 aa21.66■■□□□ 1.06
LIMS2-215ENST00000484252 BUB1O43683 1085 aa21.66■■□□□ 1.06
LIMS2-215ENST00000484252 CLSTN1O94985 981 aa21.66■■□□□ 1.06
LIMS2-215ENST00000484252 USP17L24Q0WX57 530 aa21.66■■□□□ 1.06
LIMS2-215ENST00000484252 ASIC2Q16515 512 aa21.66■■□□□ 1.06
LIMS2-215ENST00000484252 C10orf76Q5T2E6 689 aa21.66■■□□□ 1.06
LIMS2-215ENST00000484252 ALS2CLQ60I27 953 aa21.66■■□□□ 1.06
LIMS2-215ENST00000484252 USP17L6PQ6QN14 398 aa21.66■■□□□ 1.06
LIMS2-215ENST00000484252 LRRC31Q6UY01 552 aa21.66■■□□□ 1.06
LIMS2-215ENST00000484252 FAM76AQ8TAV0 307 aa21.66■■□□□ 1.06
LIMS2-215ENST00000484252 GANQ9H2C0 597 aa21.66■■□□□ 1.06
LIMS2-215ENST00000484252 BTNL10A8MVZ5 291 aa21.65■■□□□ 1.06
LIMS2-215ENST00000484252 GOLGA8KD6RF30 607 aa21.65■■□□□ 1.06
LIMS2-215ENST00000484252 OPA1O60313 960 aa21.65■■□□□ 1.06
LIMS2-215ENST00000484252 MATR3P43243 847 aaKnown RBP eCLIP21.65■■□□□ 1.06
LIMS2-215ENST00000484252 KLHL30Q0D2K2 578 aa21.65■■□□□ 1.06
LIMS2-215ENST00000484252 SLC27A3Q5K4L6 730 aa21.65■■□□□ 1.06
LIMS2-215ENST00000484252 APOBEC3HQ6NTF7 200 aaKnown RBP21.65■■□□□ 1.06
LIMS2-215ENST00000484252 FRMD5Q7Z6J6 570 aa21.65■■□□□ 1.06
LIMS2-215ENST00000484252 PSMB7Q99436 277 aa21.65■■□□□ 1.06
LIMS2-215ENST00000484252 PCDHGC5Q9Y5F6 944 aa21.65■■□□□ 1.06
LIMS2-215ENST00000484252 NPHP3-ACAD11A0A0J9YXS1 232 aa21.65■■□□□ 1.06
LIMS2-215ENST00000484252 ONECUT3O60422 494 aaPredicted RBP21.65■■□□□ 1.06
LIMS2-215ENST00000484252 MED24O75448 989 aa21.65■■□□□ 1.06
LIMS2-215ENST00000484252 SF3B2Q13435 895 aaKnown RBP21.65■■□□□ 1.06
LIMS2-215ENST00000484252 RAPGEF1Q13905 1077 aa21.65■■□□□ 1.06
LIMS2-215ENST00000484252 CDC37Q16543 378 aaPredicted RBP21.65■■□□□ 1.06
LIMS2-215ENST00000484252 ARSHQ5FYA8 562 aa21.65■■□□□ 1.06
LIMS2-215ENST00000484252 SRLQ86TD4 932 aa21.65■■□□□ 1.06
LIMS2-215ENST00000484252 TBC1D5Q92609 795 aa21.65■■□□□ 1.06
LIMS2-215ENST00000484252 KANSL2Q9H9L4 492 aa21.65■■□□□ 1.06
LIMS2-215ENST00000484252 TRAF3IP3Q9Y228 551 aa21.65■■□□□ 1.06
LIMS2-215ENST00000484252 GOLGA6CA6NDK9 693 aa21.64■■□□□ 1.05
LIMS2-215ENST00000484252 PALMO75781 387 aa21.64■■□□□ 1.05
LIMS2-215ENST00000484252 GOLGA6DP0CG33 693 aa21.64■■□□□ 1.05
LIMS2-215ENST00000484252 SCNN1DP51172 638 aa21.64■■□□□ 1.05
LIMS2-215ENST00000484252 KCNH2Q12809 1159 aa21.64■■□□□ 1.05
LIMS2-215ENST00000484252 Q4G0T1 1027 aa21.64■■□□□ 1.05
LIMS2-215ENST00000484252 SLFN13Q68D06 897 aa21.64■■□□□ 1.05
LIMS2-215ENST00000484252 GPIHBP1Q8IV16 184 aa21.64■■□□□ 1.05
LIMS2-215ENST00000484252 IFT20Q8IY31 132 aa21.64■■□□□ 1.05
LIMS2-215ENST00000484252 PLCD3Q8N3E9 789 aa21.64■■□□□ 1.05
LIMS2-215ENST00000484252 CRYGNQ8WXF5 182 aa21.64■■□□□ 1.05
LIMS2-215ENST00000484252 RIN2Q8WYP3 895 aaPredicted RBP21.64■■□□□ 1.05
LIMS2-215ENST00000484252 TRERF1Q96PN7 1200 aa21.64■■□□□ 1.05
LIMS2-215ENST00000484252 SH3GL2Q99962 352 aa21.64■■□□□ 1.05
LIMS2-215ENST00000484252 PLCB1Q9NQ66 1216 aa21.64■■□□□ 1.05
LIMS2-215ENST00000484252 RBM12Q9NTZ6 932 aaKnown RBP21.64■■□□□ 1.05
LIMS2-215ENST00000484252 GOLGA6AQ9NYA3 693 aa21.64■■□□□ 1.05
LIMS2-215ENST00000484252 BZW2Q9Y6E2 419 aaKnown RBP21.64■■□□□ 1.05
LIMS2-215ENST00000484252 SHOX2O60902 331 aaPredicted RBP21.64■■□□□ 1.05
LIMS2-215ENST00000484252 ARHGAP4P98171 946 aa21.64■■□□□ 1.05
LIMS2-215ENST00000484252 ETNPPLQ8TBG4 499 aa21.64■■□□□ 1.05
LIMS2-215ENST00000484252 EEF2P13639 858 aaKnown RBP21.63■■□□□ 1.05
LIMS2-215ENST00000484252 NR2F2P24468 414 aa21.63■■□□□ 1.05
LIMS2-215ENST00000484252 RPA1P27694 616 aa21.63■■□□□ 1.05
LIMS2-215ENST00000484252 SLC7A5Q01650 507 aa21.63■■□□□ 1.05
LIMS2-215ENST00000484252 PPFIA1Q13136 1202 aa21.63■■□□□ 1.05
LIMS2-215ENST00000484252 MEI1Q5TIA1 1274 aa21.63■■□□□ 1.05
LIMS2-215ENST00000484252 GBP6Q6ZN66 633 aa21.63■■□□□ 1.05
LIMS2-215ENST00000484252 SYT2Q8N9I0 419 aaPredicted RBP21.63■■□□□ 1.05
LIMS2-215ENST00000484252 MXD3Q9BW11 206 aa21.63■■□□□ 1.05
LIMS2-215ENST00000484252 DNM3Q9UQ16 869 aa21.63■■□□□ 1.05
LIMS2-215ENST00000484252 RRP15Q9Y3B9 282 aaKnown RBP21.63■■□□□ 1.05
LIMS2-215ENST00000484252 CES2O00748 559 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 MEIS2O14770 477 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 CALUO43852 315 aaPredicted RBP21.62■■□□□ 1.05
LIMS2-215ENST00000484252 PPFIA4O75335 1185 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 FOSP01100 380 aaPredicted RBP21.62■■□□□ 1.05
LIMS2-215ENST00000484252 EPB41P11171 864 aaKnown RBP21.62■■□□□ 1.05
LIMS2-215ENST00000484252 KLRC1P26715 233 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 STAT3P40763 770 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 IRX3P78415 501 aaPredicted RBP21.62■■□□□ 1.05
LIMS2-215ENST00000484252 CACNB1Q02641 598 aaPredicted RBP21.62■■□□□ 1.05
LIMS2-215ENST00000484252 SPIRE1Q08AE8 756 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 GIT2Q14161 759 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 KIAA0753Q2KHM9 967 aa21.62■■□□□ 1.05
LIMS2-215ENST00000484252 ZDHHC15Q96MV8 337 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms