RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 PLXNA3P51805 1871 aa10.04□□□□□ -0.8
RTFDC1-208ENST00000484084 PLXNA4Q9HCM2 1894 aa10.04□□□□□ -0.8
RTFDC1-208ENST00000484084 TTC3P53804 2025 aa10.04□□□□□ -0.8
RTFDC1-208ENST00000484084 B4E1Z4 1266 aa10.04□□□□□ -0.8
RTFDC1-208ENST00000484084 NCK2O43639 380 aa10.04□□□□□ -0.8
RTFDC1-208ENST00000484084 MMP1P03956 469 aa10.04□□□□□ -0.8
RTFDC1-208ENST00000484084 CTNNB1P35222 781 aa10.04□□□□□ -0.8
RTFDC1-208ENST00000484084 MARCH8Q5T0T0 291 aa10.04□□□□□ -0.8
RTFDC1-208ENST00000484084 KCNV1Q6PIU1 500 aa10.04□□□□□ -0.8
RTFDC1-208ENST00000484084 TRIM67Q6ZTA4 783 aa10.04□□□□□ -0.8
RTFDC1-208ENST00000484084 EP400NLQ6ZTU2 488 aa10.04□□□□□ -0.8
RTFDC1-208ENST00000484084 FIBCD1Q8N539 461 aa10.04□□□□□ -0.8
RTFDC1-208ENST00000484084 ASIC4Q96FT7 647 aa10.04□□□□□ -0.8
RTFDC1-208ENST00000484084 MFSD14AQ96MC6 490 aa10.04□□□□□ -0.8
RTFDC1-208ENST00000484084 INPP4AQ96PE3 977 aaPredicted RBP10.04□□□□□ -0.8
RTFDC1-208ENST00000484084 LMAN2LQ9H0V9 348 aa10.04□□□□□ -0.8
RTFDC1-208ENST00000484084 AGO3Q9H9G7 860 aaKnown RBP10.04□□□□□ -0.8
RTFDC1-208ENST00000484084 MAP3K20Q9NYL2 800 aaKnown RBP10.04□□□□□ -0.8
RTFDC1-208ENST00000484084 TMEM221A6NGB7 291 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 KLRF2D3W0D1 207 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 M0R296 226 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 STXBP3O00186 592 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 ZBTB5O15062 677 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 ITGB1P05556 798 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 PARP1P09874 1014 aaKnown RBP10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 SDSP20132 328 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 RBM10P98175 930 aaKnown RBP10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 COASYQ13057 564 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 ANKRD45Q5TZF3 282 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 SMRP1Q8NCR6 262 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 VN1R2Q8NFZ6 395 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 SPPL3Q8TCT6 385 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 APBB2Q92870 758 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 ZBTB10Q96DT7 871 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 C11orf84Q9BUA3 381 aaPredicted RBP10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 USP26Q9BXU7 913 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 UPF3BQ9BZI7 483 aaKnown RBP10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 RNF41Q9H4P4 317 aaPredicted RBP10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 RIOX1Q9H6W3 641 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 KAT14Q9H8E8 782 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 SENP2Q9HC62 589 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 CD207Q9UJ71 328 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 FAM50BQ9Y247 325 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 PCDHGC5Q9Y5F6 944 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 PCDHA1Q9Y5I3 950 aa10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 MRPL42Q9Y6G3 142 aaKnown RBP10.03□□□□□ -0.8
RTFDC1-208ENST00000484084 MBLAC1A4D2B0 266 aaPredicted RBP10.02□□□□□ -0.81
RTFDC1-208ENST00000484084 ZNF213O14771 459 aa10.02□□□□□ -0.81
RTFDC1-208ENST00000484084 GHRP10912 638 aa10.02□□□□□ -0.81
RTFDC1-208ENST00000484084 VCPP55072 806 aaKnown RBP10.02□□□□□ -0.81
RTFDC1-208ENST00000484084 RRP1P56182 461 aaKnown RBP10.02□□□□□ -0.81
RTFDC1-208ENST00000484084 ZXDAP98168 799 aa10.02□□□□□ -0.81
RTFDC1-208ENST00000484084 FBXO47Q5MNV8 452 aa10.02□□□□□ -0.81
RTFDC1-208ENST00000484084 METTL7BQ6UX53 244 aa10.02□□□□□ -0.81
RTFDC1-208ENST00000484084 CYB5R4Q7L1T6 521 aa10.02□□□□□ -0.81
RTFDC1-208ENST00000484084 CYFIP1Q7L576 1253 aa10.02□□□□□ -0.81
RTFDC1-208ENST00000484084 SAMD3Q8N6K7 520 aa10.02□□□□□ -0.81
RTFDC1-208ENST00000484084 EFHBQ8N7U6 833 aa10.02□□□□□ -0.81
RTFDC1-208ENST00000484084 PIGSQ96S52 555 aa10.02□□□□□ -0.81
RTFDC1-208ENST00000484084 IGFLR1Q9H665 355 aa10.02□□□□□ -0.81
RTFDC1-208ENST00000484084 MLXIPQ9HAP2 919 aa10.02□□□□□ -0.81
RTFDC1-208ENST00000484084 VPS13AQ96RL7 3174 aa10.02□□□□□ -0.81
RTFDC1-208ENST00000484084 DNAH14Q0VDD8 3507 aa10.02□□□□□ -0.81
RTFDC1-208ENST00000484084 GSTTP1A0A1W2PQM5 241 aa10.01□□□□□ -0.81
RTFDC1-208ENST00000484084 ATP9AO75110 1047 aa10.01□□□□□ -0.81
RTFDC1-208ENST00000484084 CSPG5O95196 566 aa10.01□□□□□ -0.81
RTFDC1-208ENST00000484084 CCND2P30279 289 aa10.01□□□□□ -0.81
RTFDC1-208ENST00000484084 NT5C2P49902 561 aa10.01□□□□□ -0.81
RTFDC1-208ENST00000484084 ARHGAP4P98171 946 aa10.01□□□□□ -0.81
RTFDC1-208ENST00000484084 KCNC3Q14003 757 aa10.01□□□□□ -0.81
RTFDC1-208ENST00000484084 FCHSD1Q86WN1 690 aa10.01□□□□□ -0.81
RTFDC1-208ENST00000484084 IQCA1Q86XH1 822 aa10.01□□□□□ -0.81
RTFDC1-208ENST00000484084 ATP8B4Q8TF62 1192 aa10.01□□□□□ -0.81
RTFDC1-208ENST00000484084 SUSD6Q92537 303 aa10.01□□□□□ -0.81
RTFDC1-208ENST00000484084 P2RX5Q93086 422 aa10.01□□□□□ -0.81
RTFDC1-208ENST00000484084 PBXIP1Q96AQ6 731 aa10.01□□□□□ -0.81
RTFDC1-208ENST00000484084 POP1Q99575 1024 aaKnown RBP10.01□□□□□ -0.81
RTFDC1-208ENST00000484084 PLVAPQ9BX97 442 aa10.01□□□□□ -0.81
RTFDC1-208ENST00000484084 RTEL1Q9NZ71 1219 aa10.01□□□□□ -0.81
RTFDC1-208ENST00000484084 NRCAMQ92823 1304 aa10.01□□□□□ -0.81
RTFDC1-208ENST00000484084 GCOM1H8Y6P7 765 aaPredicted RBP10□□□□□ -0.81
RTFDC1-208ENST00000484084 DHX16O60231 1041 aaKnown RBP10□□□□□ -0.81
RTFDC1-208ENST00000484084 ST18O60284 1047 aa10□□□□□ -0.81
RTFDC1-208ENST00000484084 POLR2MP0CAP2 368 aa10□□□□□ -0.81
RTFDC1-208ENST00000484084 GATMP50440 423 aa10□□□□□ -0.81
RTFDC1-208ENST00000484084 PTPN5P54829 565 aa10□□□□□ -0.81
RTFDC1-208ENST00000484084 TROAPQ12815 778 aa10□□□□□ -0.81
RTFDC1-208ENST00000484084 HDAC1Q13547 482 aaPredicted RBP10□□□□□ -0.81
RTFDC1-208ENST00000484084 BTG3Q14201 252 aaPredicted RBP10□□□□□ -0.81
RTFDC1-208ENST00000484084 GRM4Q14833 912 aa10□□□□□ -0.81
RTFDC1-208ENST00000484084 CCDC178Q5BJE1 867 aa10□□□□□ -0.81
RTFDC1-208ENST00000484084 FBXL6Q8N531 539 aa10□□□□□ -0.81
RTFDC1-208ENST00000484084 KLHL23Q8NBE8 558 aa10□□□□□ -0.81
RTFDC1-208ENST00000484084 PCYT2Q99447 389 aa10□□□□□ -0.81
RTFDC1-208ENST00000484084 TMX1Q9H3N1 280 aa10□□□□□ -0.81
RTFDC1-208ENST00000484084 FAM86C1Q9NVL1 165 aa10□□□□□ -0.81
RTFDC1-208ENST00000484084 BARX2Q9UMQ3 279 aaPredicted RBP10□□□□□ -0.81
RTFDC1-208ENST00000484084 RWDD3Q9Y3V2 267 aa10□□□□□ -0.81
RTFDC1-208ENST00000484084 USP15Q9Y4E8 981 aaPredicted RBP10□□□□□ -0.81
RTFDC1-208ENST00000484084 TAF6LQ9Y6J9 622 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms