RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 EXOC7Q9UPT5 735 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 ENO1P06733 434 aaKnown RBP11.01□□□□□ -0.65
COL12A1-207ENST00000483888 USP40Q9NVE5 1235 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 MARK3P27448 753 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 KRT76Q01546 638 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 DEPDC1BQ8WUY9 529 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 WDR60Q8WVS4 1066 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 HDAC6Q9UBN7 1215 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 PODXLO00592 558 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 LUZP2Q86TE4 346 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 ATAD3AQ9NVI7 634 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 KIF11P52732 1056 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 SMYD4Q8IYR2 804 aaPredicted RBP11.01□□□□□ -0.65
COL12A1-207ENST00000483888 FBXL5Q9UKA1 691 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 PCDHB13Q9Y5F0 798 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 MAGEB6P1A0A0J9YX57 407 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 A0A1W2PQ27 194 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 A0A1W2PQ64 194 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 A0A1W2PQD8 194 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 MFAP3LO75121 409 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 PLA2G4AP47712 749 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 COPS2P61201 443 aa11.01□□□□□ -0.65
COL12A1-207ENST00000483888 AHCYL1O43865 530 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 DEPDC1Q5TB30 811 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 PLEKHA7Q6IQ23 1121 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 TRIM74Q86UV6 250 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 TRIM73Q86UV7 250 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 GADD45GIP1Q8TAE8 222 aaPredicted RBP11□□□□□ -0.65
COL12A1-207ENST00000483888 SETD1BQ9UPS6 1966 aaKnown RBP11□□□□□ -0.65
COL12A1-207ENST00000483888 PCF11O94913 1555 aaKnown RBP11□□□□□ -0.65
COL12A1-207ENST00000483888 CCDC195A0A1B0GUA6 201 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 M0R3G1 203 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 ASNA1O43681 348 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 EXOC3O60645 756 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 STAM2O75886 525 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 CHN1P15882 459 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 HSPA6P17066 643 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 EIF4A3P38919 411 aaKnown RBP11□□□□□ -0.65
COL12A1-207ENST00000483888 MDH1BQ5I0G3 518 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 GALNT4Q8N4A0 578 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 NAF1Q96HR8 494 aaKnown RBP11□□□□□ -0.65
COL12A1-207ENST00000483888 PRPF18Q99633 342 aaKnown RBP11□□□□□ -0.65
COL12A1-207ENST00000483888 MRPS26Q9BYN8 205 aaKnown RBP11□□□□□ -0.65
COL12A1-207ENST00000483888 RWDD3Q9Y3V2 267 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 L3MBTL1Q9Y468 752 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 PLIN5Q00G26 463 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 KRR1Q13601 381 aaKnown RBP11□□□□□ -0.65
COL12A1-207ENST00000483888 TMED8Q6PL24 325 aaPredicted RBP11□□□□□ -0.65
COL12A1-207ENST00000483888 UBE2Q1Q7Z7E8 422 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 DDI1Q8WTU0 396 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 RNF34Q969K3 372 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 SAMSN1Q9NSI8 373 aaKnown RBP11□□□□□ -0.65
COL12A1-207ENST00000483888 FAM135BQ49AJ0 1406 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 PLEKHG2Q9H7P9 1386 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 PRAMEP78395 509 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 MYCT1Q8N699 235 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 RIN2Q8WYP3 895 aaPredicted RBP11□□□□□ -0.65
COL12A1-207ENST00000483888 RTEL1Q9NZ71 1219 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 PCDHA5Q9Y5H7 936 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11□□□□□ -0.65
COL12A1-207ENST00000483888 ATP6V1G2O95670 118 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 TFAP4Q01664 338 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 MECOMQ03112 1051 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 GPR141Q7Z602 305 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 MYOCDQ8IZQ8 938 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 GORASP1Q9BQQ3 440 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 OSBPL5Q9H0X9 879 aaPredicted RBP11□□□□□ -0.65
COL12A1-207ENST00000483888 GMEB1Q9Y692 573 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 PJA2O43164 708 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 KDSRQ06136 332 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 RAB44Q7Z6P3 723 aaPredicted RBP11□□□□□ -0.65
COL12A1-207ENST00000483888 SERBP1Q8NC51 408 aaKnown RBP eCLIP11□□□□□ -0.65
COL12A1-207ENST00000483888 PYROXD1Q8WU10 500 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 PALD1Q9ULE6 856 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 IPO5O00410 1097 aaKnown RBP11□□□□□ -0.65
COL12A1-207ENST00000483888 GTPBP6O43824 516 aaPredicted RBP11□□□□□ -0.65
COL12A1-207ENST00000483888 BRAFP15056 766 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 WDR24Q96S15 920 aa11□□□□□ -0.65
COL12A1-207ENST00000483888 OCM2P0CE71 109 aa10.99□□□□□ -0.65
COL12A1-207ENST00000483888 OCMP0CE72 109 aaPredicted RBP10.99□□□□□ -0.65
COL12A1-207ENST00000483888 TRIM50Q86XT4 487 aa10.99□□□□□ -0.65
COL12A1-207ENST00000483888 ANKRD27Q96NW4 1050 aa10.99□□□□□ -0.65
COL12A1-207ENST00000483888 COG4Q9H9E3 785 aa10.99□□□□□ -0.65
COL12A1-207ENST00000483888 EIF2AK4Q9P2K8 1649 aaKnown RBP10.99□□□□□ -0.65
COL12A1-207ENST00000483888 AP3B1O00203 1094 aa10.99□□□□□ -0.65
COL12A1-207ENST00000483888 TOM1O60784 492 aa10.99□□□□□ -0.65
COL12A1-207ENST00000483888 S100A9P06702 114 aaKnown RBP10.99□□□□□ -0.65
COL12A1-207ENST00000483888 ATP1A3P13637 1013 aa10.99□□□□□ -0.65
COL12A1-207ENST00000483888 NQO1P15559 274 aaKnown RBP10.99□□□□□ -0.65
COL12A1-207ENST00000483888 SERPINB8P50452 374 aa10.99□□□□□ -0.65
COL12A1-207ENST00000483888 MMADHCQ9H3L0 296 aaPredicted RBP10.99□□□□□ -0.65
COL12A1-207ENST00000483888 TRMT112Q9UI30 125 aaKnown RBP10.99□□□□□ -0.65
COL12A1-207ENST00000483888 ESYT3A0FGR9 886 aa10.99□□□□□ -0.65
COL12A1-207ENST00000483888 CCDC188H7C350 402 aa10.99□□□□□ -0.65
COL12A1-207ENST00000483888 CCDC22O60826 627 aa10.99□□□□□ -0.65
COL12A1-207ENST00000483888 PALMO75781 387 aa10.99□□□□□ -0.65
COL12A1-207ENST00000483888 KCNA1Q09470 495 aa10.99□□□□□ -0.65
COL12A1-207ENST00000483888 EME1Q96AY2 570 aa10.99□□□□□ -0.65
COL12A1-207ENST00000483888 V9GY48 417 aaPredicted RBP10.99□□□□□ -0.65
COL12A1-207ENST00000483888 EFCAB5A4FU69 1503 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms