RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 NUCB2P80303 420 aa20.12■□□□□ 0.81
CPNE1-224ENST00000483359 DGKDQ16760 1214 aa20.12■□□□□ 0.81
CPNE1-224ENST00000483359 UTP14CQ5TAP6 766 aaKnown RBP20.12■□□□□ 0.81
CPNE1-224ENST00000483359 CCSAPQ6IQ19 270 aaPredicted RBP20.12■□□□□ 0.81
CPNE1-224ENST00000483359 C4orf32Q8N8J7 132 aa20.12■□□□□ 0.81
CPNE1-224ENST00000483359 PCSK9Q8NBP7 692 aaKnown RBP20.12■□□□□ 0.81
CPNE1-224ENST00000483359 TFIP11Q9UBB9 837 aaKnown RBP20.12■□□□□ 0.81
CPNE1-224ENST00000483359 VAV3Q9UKW4 847 aa20.12■□□□□ 0.81
CPNE1-224ENST00000483359 GSTTP1A0A1W2PQM5 241 aa20.12■□□□□ 0.81
CPNE1-224ENST00000483359 MNX1P50219 401 aaPredicted RBP20.12■□□□□ 0.81
CPNE1-224ENST00000483359 ACLYP53396 1101 aa20.12■□□□□ 0.81
CPNE1-224ENST00000483359 KRT76Q01546 638 aa20.12■□□□□ 0.81
CPNE1-224ENST00000483359 NCAPH2Q6IBW4 605 aa20.12■□□□□ 0.81
CPNE1-224ENST00000483359 PPP1R13LQ8WUF5 828 aa20.12■□□□□ 0.81
CPNE1-224ENST00000483359 PCDHA12Q9UN75 941 aa20.12■□□□□ 0.81
CPNE1-224ENST00000483359 POTEMA6NI47 508 aa20.11■□□□□ 0.81
CPNE1-224ENST00000483359 ZEB2O60315 1214 aa20.11■□□□□ 0.81
CPNE1-224ENST00000483359 TECP42680 631 aa20.11■□□□□ 0.81
CPNE1-224ENST00000483359 NKX3-2P78367 333 aa20.11■□□□□ 0.81
CPNE1-224ENST00000483359 DNM1Q05193 864 aaKnown RBP20.11■□□□□ 0.81
CPNE1-224ENST00000483359 SEPT1Q8WYJ6 367 aa20.11■□□□□ 0.81
CPNE1-224ENST00000483359 ATP2C1P98194 919 aaPredicted RBP20.1■□□□□ 0.81
CPNE1-224ENST00000483359 PURAQ00577 322 aaKnown RBP20.1■□□□□ 0.81
CPNE1-224ENST00000483359 ZNF746Q6NUN9 644 aaPredicted RBP20.1■□□□□ 0.81
CPNE1-224ENST00000483359 PAWRQ96IZ0 340 aaKnown RBP20.1■□□□□ 0.81
CPNE1-224ENST00000483359 A0A1W2PQ45 241 aaPredicted RBP20.1■□□□□ 0.81
CPNE1-224ENST00000483359 A0A1W2PQY0 241 aa20.1■□□□□ 0.81
CPNE1-224ENST00000483359 WDR64B1ANS9 1081 aa20.1■□□□□ 0.81
CPNE1-224ENST00000483359 BACH1O14867 736 aa20.1■□□□□ 0.81
CPNE1-224ENST00000483359 LGALS2P05162 132 aa20.1■□□□□ 0.81
CPNE1-224ENST00000483359 NCLP19338 710 aaKnown RBP20.1■□□□□ 0.81
CPNE1-224ENST00000483359 PSMC6P62333 389 aa20.1■□□□□ 0.81
CPNE1-224ENST00000483359 MIER3Q7Z3K6 550 aa20.1■□□□□ 0.81
CPNE1-224ENST00000483359 VTI1AQ96AJ9 217 aa20.1■□□□□ 0.81
CPNE1-224ENST00000483359 ZNF396Q96N95 335 aaPredicted RBP20.1■□□□□ 0.81
CPNE1-224ENST00000483359 SENP6Q9GZR1 1112 aaPredicted RBP20.1■□□□□ 0.81
CPNE1-224ENST00000483359 DISC1Q9NRI5 854 aa20.1■□□□□ 0.81
CPNE1-224ENST00000483359 MOXD2PA6NHM9 499 aa20.09■□□□□ 0.81
CPNE1-224ENST00000483359 EML1O00423 815 aa20.09■□□□□ 0.81
CPNE1-224ENST00000483359 PPFIA4O75335 1185 aa20.09■□□□□ 0.81
CPNE1-224ENST00000483359 SPIRE1Q08AE8 756 aa20.09■□□□□ 0.81
CPNE1-224ENST00000483359 PPP2R5CQ13362 524 aa20.09■□□□□ 0.81
CPNE1-224ENST00000483359 CCDC60Q8IWA6 550 aaPredicted RBP20.09■□□□□ 0.81
CPNE1-224ENST00000483359 SMAP1Q8IYB5 467 aaPredicted RBP20.09■□□□□ 0.81
CPNE1-224ENST00000483359 ANKLE1Q8NAG6 615 aa20.09■□□□□ 0.81
CPNE1-224ENST00000483359 POLR3EQ9NVU0 708 aa20.09■□□□□ 0.81
CPNE1-224ENST00000483359 CEP131Q9UPN4 1083 aa20.09■□□□□ 0.81
CPNE1-224ENST00000483359 LAD1O00515 517 aa20.08■□□□□ 0.81
CPNE1-224ENST00000483359 MARK3P27448 753 aa20.08■□□□□ 0.81
CPNE1-224ENST00000483359 MARCKSP29966 332 aaPredicted RBP20.08■□□□□ 0.81
CPNE1-224ENST00000483359 MIS18BP1Q6P0N0 1132 aa20.08■□□□□ 0.81
CPNE1-224ENST00000483359 B3GNT9Q6UX72 402 aa20.08■□□□□ 0.81
CPNE1-224ENST00000483359 ABHD15Q6UXT9 468 aa20.08■□□□□ 0.81
CPNE1-224ENST00000483359 TRMT1LQ7Z2T5 733 aaKnown RBP20.08■□□□□ 0.81
CPNE1-224ENST00000483359 GLG1Q92896 1179 aa20.08■□□□□ 0.81
CPNE1-224ENST00000483359 PHF24Q9UPV7 400 aa20.08■□□□□ 0.81
CPNE1-224ENST00000483359 VWA3AA6NCI4 1184 aa20.08■□□□□ 0.8
CPNE1-224ENST00000483359 SUPT20HL2P0C7V6 817 aa20.08■□□□□ 0.8
CPNE1-224ENST00000483359 HOXD8P13378 290 aaPredicted RBP20.08■□□□□ 0.8
CPNE1-224ENST00000483359 JAK3P52333 1124 aa20.08■□□□□ 0.8
CPNE1-224ENST00000483359 PTPAQ15257 358 aa20.08■□□□□ 0.8
CPNE1-224ENST00000483359 IL17AQ16552 155 aa20.08■□□□□ 0.8
CPNE1-224ENST00000483359 TMEM266Q2M3C6 531 aa20.08■□□□□ 0.8
CPNE1-224ENST00000483359 SWSAP1Q6NVH7 229 aa20.08■□□□□ 0.8
CPNE1-224ENST00000483359 GLT1D1Q96MS3 346 aa20.08■□□□□ 0.8
CPNE1-224ENST00000483359 PCYT2Q99447 389 aa20.08■□□□□ 0.8
CPNE1-224ENST00000483359 C16orf70Q9BSU1 422 aa20.08■□□□□ 0.8
CPNE1-224ENST00000483359 TSEN34Q9BSV6 310 aaKnown RBP20.08■□□□□ 0.8
CPNE1-224ENST00000483359 MTG1Q9BT17 334 aaPredicted RBP20.08■□□□□ 0.8
CPNE1-224ENST00000483359 AZI2Q9H6S1 392 aa20.08■□□□□ 0.8
CPNE1-224ENST00000483359 STARD7Q9NQZ5 370 aa20.08■□□□□ 0.8
CPNE1-224ENST00000483359 CIZ1Q9ULV3 898 aaPredicted RBP20.08■□□□□ 0.8
CPNE1-224ENST00000483359 PCDHA10Q9Y5I2 948 aa20.08■□□□□ 0.8
CPNE1-224ENST00000483359 PSAPP07602 524 aa20.07■□□□□ 0.8
CPNE1-224ENST00000483359 SFNP31947 248 aa20.07■□□□□ 0.8
CPNE1-224ENST00000483359 ATN1P54259 1190 aaPredicted RBP20.07■□□□□ 0.8
CPNE1-224ENST00000483359 STK38Q15208 465 aa20.07■□□□□ 0.8
CPNE1-224ENST00000483359 DTHD1Q6ZMT9 781 aa20.07■□□□□ 0.8
CPNE1-224ENST00000483359 KAT2BQ92831 832 aa20.07■□□□□ 0.8
CPNE1-224ENST00000483359 CAPN15O75808 1086 aa20.06■□□□□ 0.8
CPNE1-224ENST00000483359 ATG7O95352 703 aa20.06■□□□□ 0.8
CPNE1-224ENST00000483359 BMP15O95972 392 aa20.06■□□□□ 0.8
CPNE1-224ENST00000483359 F2P00734 622 aa20.06■□□□□ 0.8
CPNE1-224ENST00000483359 CYP4A11Q02928 519 aa20.06■□□□□ 0.8
CPNE1-224ENST00000483359 BANK1Q8NDB2 785 aa20.06■□□□□ 0.8
CPNE1-224ENST00000483359 C11orf49Q9H6J7 331 aa20.06■□□□□ 0.8
CPNE1-224ENST00000483359 ZNF302Q9NR11 478 aa20.06■□□□□ 0.8
CPNE1-224ENST00000483359 CHMP5Q9NZZ3 219 aa20.06■□□□□ 0.8
CPNE1-224ENST00000483359 GABBR1Q9UBS5 961 aa20.06■□□□□ 0.8
CPNE1-224ENST00000483359 ATP6V1DQ9Y5K8 247 aa20.06■□□□□ 0.8
CPNE1-224ENST00000483359 EMSYQ7Z589 1322 aa20.06■□□□□ 0.8
CPNE1-224ENST00000483359 H3BRB1 525 aa20.06■□□□□ 0.8
CPNE1-224ENST00000483359 PRPHP41219 470 aa20.06■□□□□ 0.8
CPNE1-224ENST00000483359 NASPP49321 788 aaPredicted RBP20.06■□□□□ 0.8
CPNE1-224ENST00000483359 GRIN1Q05586 938 aa20.06■□□□□ 0.8
CPNE1-224ENST00000483359 UGCGQ16739 394 aa20.06■□□□□ 0.8
CPNE1-224ENST00000483359 TUT1Q9H6E5 874 aaKnown RBP20.06■□□□□ 0.8
CPNE1-224ENST00000483359 PP2D1A8MPX8 630 aa20.05■□□□□ 0.8
CPNE1-224ENST00000483359 KPNA6O60684 536 aa20.05■□□□□ 0.8
CPNE1-224ENST00000483359 FXR2P51116 673 aaKnown RBP eCLIP20.05■□□□□ 0.82e-6■■■□□ 18.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms