RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 ZNF711Q9Y462 761 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 ABCC12Q96J65 1359 aa8.53□□□□□ -1.04
COL4A5-205ENST00000483338 SETBP1Q9Y6X0 1596 aa8.52□□□□□ -1.04
COL4A5-205ENST00000483338 DYTNA2CJ06 578 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 NUTM2BA6NNL0 878 aaPredicted RBP8.52□□□□□ -1.05
COL4A5-205ENST00000483338 NUTM2EB1AL46 878 aaPredicted RBP8.52□□□□□ -1.05
COL4A5-205ENST00000483338 H0Y3Z8 333 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 NVLO15381 856 aaKnown RBP8.52□□□□□ -1.05
COL4A5-205ENST00000483338 GNAT2P19087 354 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 STX17P56962 302 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 CAMK2BQ13554 666 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 SH3D19Q5HYK7 790 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 RESP18Q5W5W9 173 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 PPP1R42Q7Z4L9 355 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 MAP7D3Q8IWC1 876 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 NELFBQ8WX92 580 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 NUDCD1Q96RS6 583 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 SEC31BQ9NQW1 1179 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 GPHNQ9NQX3 736 aaPredicted RBP8.52□□□□□ -1.05
COL4A5-205ENST00000483338 GJB4Q9NTQ9 266 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 DACH1Q9UI36 760 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 A0A0G2JS52 829 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 PLEKHG3A1L390 1219 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 GOLGA8AA7E2F4 631 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 GSTT2P0CG29 244 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 GSTT2BP0CG30 244 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 RASA1P20936 1047 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 CTNNA1P35221 906 aaKnown RBP8.52□□□□□ -1.05
COL4A5-205ENST00000483338 ADARP55265 1226 aaKnown RBP8.52□□□□□ -1.05
COL4A5-205ENST00000483338 NT5DC1Q5TFE4 455 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 RETREG2Q8NC44 543 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 ANKK1Q8NFD2 765 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 ATXN2LQ8WWM7 1075 aaKnown RBP8.52□□□□□ -1.05
COL4A5-205ENST00000483338 EVI5LQ96CN4 794 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 SMC6Q96SB8 1091 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 TCHPQ9BT92 498 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 CD2APQ9Y5K6 639 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 LAMA4Q16363 1823 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 MED23Q9ULK4 1368 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 A6NJR5 290 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 PORP16435 677 aaPredicted RBP8.52□□□□□ -1.05
COL4A5-205ENST00000483338 HALP42357 657 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 NEK2P51955 445 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 LIN52Q52LA3 116 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 SPATA1Q5VX52 437 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 GRAMD4Q6IC98 578 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 PHLDB3Q6NSJ2 640 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 WDR59Q6PJI9 974 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 NACC2Q96BF6 587 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 DNAJC1Q96KC8 554 aaKnown RBP8.52□□□□□ -1.05
COL4A5-205ENST00000483338 CTAGE1Q96RT6 745 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 SETDB2Q96T68 719 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 KCNH3Q9ULD8 1083 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 TDRKHQ9Y2W6 561 aaKnown RBP8.52□□□□□ -1.05
COL4A5-205ENST00000483338 CAPN6Q9Y6Q1 641 aa8.52□□□□□ -1.05
COL4A5-205ENST00000483338 TIMM44O43615 452 aa8.51□□□□□ -1.05
COL4A5-205ENST00000483338 SNX3O60493 162 aa8.51□□□□□ -1.05
COL4A5-205ENST00000483338 OAS1P00973 400 aaKnown RBP8.51□□□□□ -1.05
COL4A5-205ENST00000483338 CHGBP05060 677 aa8.51□□□□□ -1.05
COL4A5-205ENST00000483338 CHN1P15882 459 aa8.51□□□□□ -1.05
COL4A5-205ENST00000483338 ERCC5P28715 1186 aaPredicted RBP8.51□□□□□ -1.05
COL4A5-205ENST00000483338 GALK1P51570 392 aa8.51□□□□□ -1.05
COL4A5-205ENST00000483338 RTP1P59025 263 aa8.51□□□□□ -1.05
COL4A5-205ENST00000483338 BCL2A1Q16548 175 aa8.51□□□□□ -1.05
COL4A5-205ENST00000483338 FAM47EQ6ZV65 393 aa8.51□□□□□ -1.05
COL4A5-205ENST00000483338 ZC3H18Q86VM9 953 aaKnown RBP8.51□□□□□ -1.05
COL4A5-205ENST00000483338 GRAMD1CQ8IYS0 662 aa8.51□□□□□ -1.05
COL4A5-205ENST00000483338 CABLES1Q8TDN4 633 aa8.51□□□□□ -1.05
COL4A5-205ENST00000483338 HAUS1Q96CS2 278 aa8.51□□□□□ -1.05
COL4A5-205ENST00000483338 CNOT10Q9H9A5 744 aaKnown RBP8.51□□□□□ -1.05
COL4A5-205ENST00000483338 MYPNQ86TC9 1320 aa8.51□□□□□ -1.05
COL4A5-205ENST00000483338 CHL1O00533 1208 aa8.51□□□□□ -1.05
COL4A5-205ENST00000483338 PRLRP16471 622 aa8.51□□□□□ -1.05
COL4A5-205ENST00000483338 KRT32Q14532 448 aa8.51□□□□□ -1.05
COL4A5-205ENST00000483338 FAAH2Q6GMR7 532 aa8.51□□□□□ -1.05
COL4A5-205ENST00000483338 SPATA24Q86W54 205 aa8.51□□□□□ -1.05
COL4A5-205ENST00000483338 TTC30AQ86WT1 665 aa8.51□□□□□ -1.05
COL4A5-205ENST00000483338 PDCD7Q8N8D1 485 aaKnown RBP8.51□□□□□ -1.05
COL4A5-205ENST00000483338 USP44Q9H0E7 712 aa8.51□□□□□ -1.05
COL4A5-205ENST00000483338 TUT1Q9H6E5 874 aaKnown RBP8.51□□□□□ -1.05
COL4A5-205ENST00000483338 SART1O43290 800 aaKnown RBP8.5□□□□□ -1.05
COL4A5-205ENST00000483338 UBTFL6P0CB48 400 aaPredicted RBP8.5□□□□□ -1.05
COL4A5-205ENST00000483338 CCNB1P14635 433 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 KRT83P78385 493 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 CDK17Q00537 523 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 DIXDC1Q155Q3 683 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 TSR1Q2NL82 804 aaKnown RBP8.5□□□□□ -1.05
COL4A5-205ENST00000483338 USPL1Q5W0Q7 1092 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 KLHL10Q6JEL2 608 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 KLC3Q6P597 504 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 PEX5LQ8IYB4 626 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 FITM2Q8N6M3 262 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 TTC8Q8TAM2 541 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 MS4A14Q96JA4 679 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 MIS12Q9H081 205 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 RETREG1Q9H6L5 497 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 TTC26A0AVF1 554 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 SPTLC1O15269 473 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 ASMTLO95671 621 aa8.5□□□□□ -1.05
COL4A5-205ENST00000483338 ZCCHC18P0CG32 403 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms