RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 MICU3Q86XE3 530 aa14.72□□□□□ -0.05
COL21A1-209ENST00000482933 CMTR1Q8N1G2 835 aaKnown RBP14.72□□□□□ -0.05
COL21A1-209ENST00000482933 MYLIPQ8WY64 445 aa14.72□□□□□ -0.05
COL21A1-209ENST00000482933 INPP4AQ96PE3 977 aaPredicted RBP14.72□□□□□ -0.05
COL21A1-209ENST00000482933 ALG1Q9BT22 464 aa14.72□□□□□ -0.05
COL21A1-209ENST00000482933 HDAC6Q9UBN7 1215 aa14.72□□□□□ -0.05
COL21A1-209ENST00000482933 HAS3O00219 553 aa14.71□□□□□ -0.05
COL21A1-209ENST00000482933 MEIS2O14770 477 aa14.71□□□□□ -0.05
COL21A1-209ENST00000482933 FIBPO43427 364 aa14.71□□□□□ -0.05
COL21A1-209ENST00000482933 PARNO95453 639 aaKnown RBP14.71□□□□□ -0.05
COL21A1-209ENST00000482933 HMGB1P09429 215 aaKnown RBP14.71□□□□□ -0.05
COL21A1-209ENST00000482933 EXOSC10Q01780 885 aaKnown RBP14.71□□□□□ -0.05
COL21A1-209ENST00000482933 COL9A3Q14050 684 aaPredicted RBP14.71□□□□□ -0.05
COL21A1-209ENST00000482933 PCNX4Q63HM2 1172 aa14.71□□□□□ -0.05
COL21A1-209ENST00000482933 TMTC3Q6ZXV5 915 aa14.71□□□□□ -0.05
COL21A1-209ENST00000482933 NLRX1Q86UT6 975 aa14.71□□□□□ -0.05
COL21A1-209ENST00000482933 RAB11FIP4Q86YS3 637 aa14.71□□□□□ -0.05
COL21A1-209ENST00000482933 CCDC82Q8N4S0 544 aa14.71□□□□□ -0.05
COL21A1-209ENST00000482933 AFAP1L1Q8TED9 768 aa14.71□□□□□ -0.05
COL21A1-209ENST00000482933 PSTPIP2Q9H939 334 aa14.71□□□□□ -0.05
COL21A1-209ENST00000482933 PPP4R2Q9NY27 417 aa14.71□□□□□ -0.05
COL21A1-209ENST00000482933 RTEL1Q9NZ71 1219 aa14.71□□□□□ -0.05
COL21A1-209ENST00000482933 SPATA31C2B4DYI2 1134 aa14.7□□□□□ -0.06
COL21A1-209ENST00000482933 SMAPO00193 183 aa14.7□□□□□ -0.06
COL21A1-209ENST00000482933 NOP56O00567 594 aaKnown RBP14.7□□□□□ -0.06
COL21A1-209ENST00000482933 SORBS3O60504 671 aa14.7□□□□□ -0.06
COL21A1-209ENST00000482933 ZNF286BP0CG31 522 aa14.7□□□□□ -0.06
COL21A1-209ENST00000482933 GRIN2CQ14957 1233 aa14.7□□□□□ -0.06
COL21A1-209ENST00000482933 MAFAQ8NHW3 353 aaPredicted RBP14.7□□□□□ -0.06
COL21A1-209ENST00000482933 GPKOWQ92917 476 aaPredicted RBP eCLIP14.7□□□□□ -0.06
COL21A1-209ENST00000482933 VWCEQ96DN2 955 aa14.7□□□□□ -0.06
COL21A1-209ENST00000482933 SENP7Q9BQF6 1050 aa14.7□□□□□ -0.06
COL21A1-209ENST00000482933 FTOQ9C0B1 505 aaKnown RBP eCLIP14.7□□□□□ -0.06
COL21A1-209ENST00000482933 TANC1Q9C0D5 1861 aa14.69□□□□□ -0.06
COL21A1-209ENST00000482933 ZBTB43O43298 467 aa14.69□□□□□ -0.06
COL21A1-209ENST00000482933 SELPP16109 830 aa14.69□□□□□ -0.06
COL21A1-209ENST00000482933 RBL2Q08999 1139 aa14.69□□□□□ -0.06
COL21A1-209ENST00000482933 PTK7Q13308 1070 aa14.69□□□□□ -0.06
COL21A1-209ENST00000482933 RTN1Q16799 776 aa14.69□□□□□ -0.06
COL21A1-209ENST00000482933 APOA5Q6Q788 366 aa14.69□□□□□ -0.06
COL21A1-209ENST00000482933 METTL7BQ6UX53 244 aa14.69□□□□□ -0.06
COL21A1-209ENST00000482933 TTC13Q8NBP0 860 aa14.69□□□□□ -0.06
COL21A1-209ENST00000482933 CDHR1Q96JP9 859 aa14.69□□□□□ -0.06
COL21A1-209ENST00000482933 USP26Q9BXU7 913 aa14.69□□□□□ -0.06
COL21A1-209ENST00000482933 SLC28A3Q9HAS3 691 aa14.69□□□□□ -0.06
COL21A1-209ENST00000482933 SCN5AQ14524 2016 aa14.69□□□□□ -0.06
COL21A1-209ENST00000482933 TRIP12Q14669 1992 aaPredicted RBP14.68□□□□□ -0.06
COL21A1-209ENST00000482933 SPDYE3A6NKU9 549 aa14.68□□□□□ -0.06
COL21A1-209ENST00000482933 H3BRB1 525 aa14.68□□□□□ -0.06
COL21A1-209ENST00000482933 ATP2A2P16615 1042 aaKnown RBP14.68□□□□□ -0.06
COL21A1-209ENST00000482933 RCAN1P53805 252 aa14.68□□□□□ -0.06
COL21A1-209ENST00000482933 FGD1P98174 961 aa14.68□□□□□ -0.06
COL21A1-209ENST00000482933 ADCK5Q3MIX3 580 aa14.68□□□□□ -0.06
COL21A1-209ENST00000482933 LRRC8DQ7L1W4 858 aa14.68□□□□□ -0.06
COL21A1-209ENST00000482933 CYFIP1Q7L576 1253 aa14.68□□□□□ -0.06
COL21A1-209ENST00000482933 TEX2Q8IWB9 1127 aa14.68□□□□□ -0.06
COL21A1-209ENST00000482933 GIMAP8Q8ND71 665 aaPredicted RBP14.68□□□□□ -0.06
COL21A1-209ENST00000482933 PHOSPHO2Q8TCD6 241 aa14.68□□□□□ -0.06
COL21A1-209ENST00000482933 CTAGE1Q96RT6 745 aa14.68□□□□□ -0.06
COL21A1-209ENST00000482933 SLC9A7Q96T83 725 aa14.68□□□□□ -0.06
COL21A1-209ENST00000482933 GAS2L1Q99501 681 aaPredicted RBP14.68□□□□□ -0.06
COL21A1-209ENST00000482933 C16orf70Q9BSU1 422 aa14.68□□□□□ -0.06
COL21A1-209ENST00000482933 TUT1Q9H6E5 874 aaKnown RBP14.68□□□□□ -0.06
COL21A1-209ENST00000482933 EHMT1Q9H9B1 1298 aa14.68□□□□□ -0.06
COL21A1-209ENST00000482933 PCDHA11Q9Y5I1 949 aa14.68□□□□□ -0.06
COL21A1-209ENST00000482933 hCG_1642624A0A1W2PR95 340 aa14.67□□□□□ -0.06
COL21A1-209ENST00000482933 hCG_1984214I3L0E3 225 aa14.67□□□□□ -0.06
COL21A1-209ENST00000482933 BAIAP3O94812 1187 aa14.67□□□□□ -0.06
COL21A1-209ENST00000482933 LGALS2P05162 132 aa14.67□□□□□ -0.06
COL21A1-209ENST00000482933 CKBP12277 381 aa14.67□□□□□ -0.06
COL21A1-209ENST00000482933 KCNC4Q03721 635 aa14.67□□□□□ -0.06
COL21A1-209ENST00000482933 SEMA3FQ13275 785 aa14.67□□□□□ -0.06
COL21A1-209ENST00000482933 HEATR3Q7Z4Q2 680 aa14.67□□□□□ -0.06
COL21A1-209ENST00000482933 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.67□□□□□ -0.06
COL21A1-209ENST00000482933 ZNF713Q8N859 430 aaPredicted RBP14.67□□□□□ -0.06
COL21A1-209ENST00000482933 DHX38Q92620 1227 aaKnown RBP14.67□□□□□ -0.06
COL21A1-209ENST00000482933 GPRASP2Q96D09 838 aa14.67□□□□□ -0.06
COL21A1-209ENST00000482933 TCEANC2Q96MN5 208 aa14.67□□□□□ -0.06
COL21A1-209ENST00000482933 NKX2-4Q9H2Z4 354 aa14.67□□□□□ -0.06
COL21A1-209ENST00000482933 CDH23Q9H251 3354 aa14.67□□□□□ -0.06
COL21A1-209ENST00000482933 CNTNAP5Q8WYK1 1306 aa14.67□□□□□ -0.06
COL21A1-209ENST00000482933 KLF18A0A0U1RQI7 1052 aa14.66□□□□□ -0.06
COL21A1-209ENST00000482933 C17orf102A2RUQ5 167 aa14.66□□□□□ -0.06
COL21A1-209ENST00000482933 GOLGA8AA7E2F4 631 aa14.66□□□□□ -0.06
COL21A1-209ENST00000482933 GOLGA8BA8MQT2 603 aa14.66□□□□□ -0.06
COL21A1-209ENST00000482933 DLL1O00548 723 aa14.66□□□□□ -0.06
COL21A1-209ENST00000482933 MAFGO15525 162 aa14.66□□□□□ -0.06
COL21A1-209ENST00000482933 NUDT18Q6ZVK8 323 aa14.66□□□□□ -0.06
COL21A1-209ENST00000482933 KCNB2Q92953 911 aa14.66□□□□□ -0.06
COL21A1-209ENST00000482933 GPR20Q99678 358 aa14.66□□□□□ -0.06
COL21A1-209ENST00000482933 NPDC1Q9NQX5 325 aaPredicted RBP14.66□□□□□ -0.06
COL21A1-209ENST00000482933 ZNF215Q9UL58 517 aaPredicted RBP14.66□□□□□ -0.06
COL21A1-209ENST00000482933 BRPF3Q9ULD4 1205 aa14.66□□□□□ -0.06
COL21A1-209ENST00000482933 PCDHA6Q9UN73 950 aa14.66□□□□□ -0.06
COL21A1-209ENST00000482933 YBX2Q9Y2T7 364 aaKnown RBP14.66□□□□□ -0.06
COL21A1-209ENST00000482933 PCDHA8Q9Y5H6 950 aa14.66□□□□□ -0.06
COL21A1-209ENST00000482933 GBF1Q92538 1859 aa14.66□□□□□ -0.06
COL21A1-209ENST00000482933 CCDC196A0A1B0GTZ2 297 aa14.66□□□□□ -0.06
COL21A1-209ENST00000482933 KIF28PB7ZC32 967 aa14.66□□□□□ -0.06
COL21A1-209ENST00000482933 REC8O95072 547 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms