RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 WDR64B1ANS9 1081 aa17.28■□□□□ 0.36
CCM2-215ENST00000482714 CABYRO75952 493 aa17.28■□□□□ 0.36
CCM2-215ENST00000482714 C6orf222P0C671 652 aaPredicted RBP17.28■□□□□ 0.36
CCM2-215ENST00000482714 STK38Q15208 465 aa17.28■□□□□ 0.36
CCM2-215ENST00000482714 EPHA7Q15375 998 aa17.28■□□□□ 0.36
CCM2-215ENST00000482714 FSCN1Q16658 493 aaKnown RBP17.28■□□□□ 0.36
CCM2-215ENST00000482714 ABHD15Q6UXT9 468 aa17.28■□□□□ 0.36
CCM2-215ENST00000482714 KCTD17Q8N5Z5 321 aa17.28■□□□□ 0.36
CCM2-215ENST00000482714 U2AF1L4Q8WU68 220 aaKnown RBP17.28■□□□□ 0.36
CCM2-215ENST00000482714 AFG1LQ8WV93 481 aa17.28■□□□□ 0.36
CCM2-215ENST00000482714 BCAS3Q9H6U6 928 aa17.28■□□□□ 0.36
CCM2-215ENST00000482714 DISC1Q9NRI5 854 aa17.28■□□□□ 0.36
CCM2-215ENST00000482714 PKD2L1Q9P0L9 805 aa17.28■□□□□ 0.36
CCM2-215ENST00000482714 VAV3Q9UKW4 847 aa17.28■□□□□ 0.36
CCM2-215ENST00000482714 ELP1O95163 1332 aa17.28■□□□□ 0.36
CCM2-215ENST00000482714 SYNRGQ9UMZ2 1314 aa17.28■□□□□ 0.36
CCM2-215ENST00000482714 IGKV6D-21A0A0A0MT36 114 aa17.27■□□□□ 0.36
CCM2-215ENST00000482714 GSTTP1A0A1W2PQM5 241 aa17.27■□□□□ 0.36
CCM2-215ENST00000482714 POTEFA5A3E0 1075 aa17.27■□□□□ 0.36
CCM2-215ENST00000482714 MOXD2PA6NHM9 499 aa17.27■□□□□ 0.36
CCM2-215ENST00000482714 SPTLC2O15270 562 aa17.27■□□□□ 0.36
CCM2-215ENST00000482714 CTAGE5O15320 804 aa17.27■□□□□ 0.36
CCM2-215ENST00000482714 SLC26A4O43511 780 aa17.27■□□□□ 0.36
CCM2-215ENST00000482714 DKC1O60832 514 aaKnown RBP eCLIP17.27■□□□□ 0.36
CCM2-215ENST00000482714 TFRCP02786 760 aaKnown RBP17.27■□□□□ 0.36
CCM2-215ENST00000482714 PSAPP07602 524 aa17.27■□□□□ 0.36
CCM2-215ENST00000482714 LONP1P36776 959 aaKnown RBP17.27■□□□□ 0.36
CCM2-215ENST00000482714 TECP42680 631 aa17.27■□□□□ 0.36
CCM2-215ENST00000482714 SLC26A2P50443 739 aa17.27■□□□□ 0.36
CCM2-215ENST00000482714 ACTR2P61160 394 aa17.27■□□□□ 0.36
CCM2-215ENST00000482714 SPIRE1Q08AE8 756 aa17.27■□□□□ 0.36
CCM2-215ENST00000482714 GJC2Q5T442 439 aaPredicted RBP17.27■□□□□ 0.36
CCM2-215ENST00000482714 CCSAPQ6IQ19 270 aaPredicted RBP17.27■□□□□ 0.36
CCM2-215ENST00000482714 MIS18BP1Q6P0N0 1132 aa17.27■□□□□ 0.36
CCM2-215ENST00000482714 IGSF22Q8N9C0 903 aa17.27■□□□□ 0.36
CCM2-215ENST00000482714 TNPO1Q92973 898 aaKnown RBP17.27■□□□□ 0.36
CCM2-215ENST00000482714 SEZ6LQ9BYH1 1024 aa17.27■□□□□ 0.36
CCM2-215ENST00000482714 DNM1LO00429 736 aa17.26■□□□□ 0.35
CCM2-215ENST00000482714 LGR5O75473 907 aa17.26■□□□□ 0.35
CCM2-215ENST00000482714 PGK1P00558 417 aa17.26■□□□□ 0.35
CCM2-215ENST00000482714 MMP3P08254 477 aa17.26■□□□□ 0.35
CCM2-215ENST00000482714 MUTP22033 750 aa17.26■□□□□ 0.35
CCM2-215ENST00000482714 CEBPZQ03701 1054 aaKnown RBP17.26■□□□□ 0.35
CCM2-215ENST00000482714 LRRC41Q15345 812 aa17.26■□□□□ 0.35
CCM2-215ENST00000482714 CSPP1Q1MSJ5 1256 aa17.26■□□□□ 0.35
CCM2-215ENST00000482714 CLEC17AQ6ZS10 378 aa17.26■□□□□ 0.35
CCM2-215ENST00000482714 PLPPR4Q7Z2D5 763 aa17.26■□□□□ 0.35
CCM2-215ENST00000482714 MIER3Q7Z3K6 550 aa17.26■□□□□ 0.35
CCM2-215ENST00000482714 ZNF579Q8NAF0 562 aaKnown RBP17.26■□□□□ 0.35
CCM2-215ENST00000482714 ERMNQ8TAM6 284 aa17.26■□□□□ 0.35
CCM2-215ENST00000482714 NEK9Q8TD19 979 aa17.26■□□□□ 0.35
CCM2-215ENST00000482714 UNC45AQ9H3U1 944 aa17.26■□□□□ 0.35
CCM2-215ENST00000482714 SMARCAD1Q9H4L7 1026 aa17.26■□□□□ 0.35
CCM2-215ENST00000482714 CCNE2O96020 404 aa17.25■□□□□ 0.35
CCM2-215ENST00000482714 TCF7P36402 384 aaPredicted RBP17.25■□□□□ 0.35
CCM2-215ENST00000482714 KRI1Q8N9T8 703 aaKnown RBP17.25■□□□□ 0.35
CCM2-215ENST00000482714 AFAP1L1Q8TED9 768 aa17.25■□□□□ 0.35
CCM2-215ENST00000482714 AZI2Q9H6S1 392 aa17.25■□□□□ 0.35
CCM2-215ENST00000482714 LRWD1Q9UFC0 647 aa17.25■□□□□ 0.35
CCM2-215ENST00000482714 SAMM50Q9Y512 469 aa17.25■□□□□ 0.35
CCM2-215ENST00000482714 DDX39AO00148 427 aaKnown RBP17.24■□□□□ 0.35
CCM2-215ENST00000482714 P4HBP07237 508 aaKnown RBP17.24■□□□□ 0.35
CCM2-215ENST00000482714 SUPT20HL2P0C7V6 817 aa17.24■□□□□ 0.35
CCM2-215ENST00000482714 STAT5BP51692 787 aa17.24■□□□□ 0.35
CCM2-215ENST00000482714 KCNA10Q16322 511 aa17.24■□□□□ 0.35
CCM2-215ENST00000482714 FOXD4L6Q3SYB3 417 aaPredicted RBP17.24■□□□□ 0.35
CCM2-215ENST00000482714 FAM160B1Q5W0V3 765 aa17.24■□□□□ 0.35
CCM2-215ENST00000482714 HAUS3Q68CZ6 603 aa17.24■□□□□ 0.35
CCM2-215ENST00000482714 FOXD4L3Q6VB84 417 aaPredicted RBP17.24■□□□□ 0.35
CCM2-215ENST00000482714 GJA10Q969M2 543 aa17.24■□□□□ 0.35
CCM2-215ENST00000482714 SPATA32Q96LK8 384 aa17.24■□□□□ 0.35
CCM2-215ENST00000482714 HSD17B14Q9BPX1 270 aa17.24■□□□□ 0.35
CCM2-215ENST00000482714 MTG1Q9BT17 334 aaPredicted RBP17.24■□□□□ 0.35
CCM2-215ENST00000482714 KATNAL1Q9BW62 490 aa17.24■□□□□ 0.35
CCM2-215ENST00000482714 MAFBQ9Y5Q3 323 aaPredicted RBP17.24■□□□□ 0.35
CCM2-215ENST00000482714 VWA3AA6NCI4 1184 aa17.24■□□□□ 0.35
CCM2-215ENST00000482714 KBTBD13C9JR72 458 aa17.24■□□□□ 0.35
CCM2-215ENST00000482714 CUTAO60888 179 aa17.24■□□□□ 0.35
CCM2-215ENST00000482714 MYCP01106 439 aaPredicted RBP17.24■□□□□ 0.35
CCM2-215ENST00000482714 XRCC6P12956 609 aaKnown RBP eCLIP17.24■□□□□ 0.35
CCM2-215ENST00000482714 NCLP19338 710 aaKnown RBP17.24■□□□□ 0.35
CCM2-215ENST00000482714 IL17AQ16552 155 aa17.24■□□□□ 0.35
CCM2-215ENST00000482714 LEO1Q8WVC0 666 aaPredicted RBP17.24■□□□□ 0.35
CCM2-215ENST00000482714 ATP6V0A1Q93050 837 aa17.24■□□□□ 0.35
CCM2-215ENST00000482714 POLR3CQ9BUI4 534 aaPredicted RBP17.24■□□□□ 0.35
CCM2-215ENST00000482714 FTOQ9C0B1 505 aaKnown RBP eCLIP17.24■□□□□ 0.35
CCM2-215ENST00000482714 TUFT1Q9NNX1 390 aa17.24■□□□□ 0.35
CCM2-215ENST00000482714 ERAP1Q9NZ08 941 aa17.24■□□□□ 0.35
CCM2-215ENST00000482714 FBXO2Q9UK22 296 aaPredicted RBP17.24■□□□□ 0.35
CCM2-215ENST00000482714 ZNF215Q9UL58 517 aaPredicted RBP17.24■□□□□ 0.35
CCM2-215ENST00000482714 EMSYQ7Z589 1322 aa17.23■□□□□ 0.35
CCM2-215ENST00000482714 KIAA0100Q14667 2235 aaKnown RBP17.23■□□□□ 0.35
CCM2-215ENST00000482714 H3BRB1 525 aa17.23■□□□□ 0.35
CCM2-215ENST00000482714 EML1O00423 815 aa17.23■□□□□ 0.35
CCM2-215ENST00000482714 ASGR1P07306 291 aa17.23■□□□□ 0.35
CCM2-215ENST00000482714 RPA1P27694 616 aa17.23■□□□□ 0.35
CCM2-215ENST00000482714 MARCKSP29966 332 aaPredicted RBP17.23■□□□□ 0.35
CCM2-215ENST00000482714 QARSP47897 775 aaKnown RBP17.23■□□□□ 0.35
CCM2-215ENST00000482714 ACLYP53396 1101 aa17.23■□□□□ 0.35
CCM2-215ENST00000482714 PURAQ00577 322 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms