RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 UBIAD1Q9Y5Z9 338 aa11.38□□□□□ -0.59
SPTLC1-206ENST00000482632 TRIP12Q14669 1992 aaPredicted RBP11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 SCN10AQ9Y5Y9 1956 aa11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 UNC80Q8N2C7 3258 aa11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 CCDC194A0A1B0GVG4 234 aa11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 GRXCR2A6NFK2 248 aa11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 A6NJR5 290 aa11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 SPATA31C2B4DYI2 1134 aa11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 KPNA6O60684 536 aa11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 CLTBP09497 229 aa11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 ITGB5P18084 799 aa11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 ICAM3P32942 547 aa11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 MDM2Q00987 491 aaPredicted RBP11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 ST3GAL1Q11201 340 aa11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 NBPF20Q3BBV1 942 aa11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 CEP55Q53EZ4 464 aa11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 MYSM1Q5VVJ2 828 aa11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 PPTC7Q8NI37 304 aa11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 CYP2W1Q8TAV3 490 aa11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 LBHD1Q9BQE6 289 aaPredicted RBP11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 SDF4Q9BRK5 362 aa11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 TMEM39AQ9NV64 488 aa11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 PCDHGA4Q9Y5G9 962 aa11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 MYH9P35579 1960 aaKnown RBP11.37□□□□□ -0.59
SPTLC1-206ENST00000482632 CD2BP2O95400 341 aaKnown RBP11.36□□□□□ -0.59
SPTLC1-206ENST00000482632 ARP10275 920 aa11.36□□□□□ -0.59
SPTLC1-206ENST00000482632 HOXB3P14651 431 aaPredicted RBP11.36□□□□□ -0.59
SPTLC1-206ENST00000482632 KRT2P35908 639 aa11.36□□□□□ -0.59
SPTLC1-206ENST00000482632 NKX3-2P78367 333 aa11.36□□□□□ -0.59
SPTLC1-206ENST00000482632 GNL2Q13823 731 aaKnown RBP11.36□□□□□ -0.59
SPTLC1-206ENST00000482632 SNX17Q15036 470 aa11.36□□□□□ -0.59
SPTLC1-206ENST00000482632 NONOQ15233 471 aaKnown RBP eCLIP11.36□□□□□ -0.59
SPTLC1-206ENST00000482632 HSDL1Q3SXM5 330 aa11.36□□□□□ -0.59
SPTLC1-206ENST00000482632 PRR16Q569H4 304 aa11.36□□□□□ -0.59
SPTLC1-206ENST00000482632 GALNT17Q6IS24 598 aa11.36□□□□□ -0.59
SPTLC1-206ENST00000482632 METTL7BQ6UX53 244 aa11.36□□□□□ -0.59
SPTLC1-206ENST00000482632 KRT25Q7Z3Z0 450 aa11.36□□□□□ -0.59
SPTLC1-206ENST00000482632 TEX2Q8IWB9 1127 aa11.36□□□□□ -0.59
SPTLC1-206ENST00000482632 GIMAP8Q8ND71 665 aaPredicted RBP11.36□□□□□ -0.59
SPTLC1-206ENST00000482632 TBCKQ8TEA7 893 aa11.36□□□□□ -0.59
SPTLC1-206ENST00000482632 PHF20Q9BVI0 1012 aa11.36□□□□□ -0.59
SPTLC1-206ENST00000482632 PDLIM7Q9NR12 457 aa11.36□□□□□ -0.59
SPTLC1-206ENST00000482632 KCNH7Q9NS40 1196 aa11.36□□□□□ -0.59
SPTLC1-206ENST00000482632 NOD1Q9Y239 953 aa11.36□□□□□ -0.59
SPTLC1-206ENST00000482632 LTBP2Q14767 1821 aa11.36□□□□□ -0.59
SPTLC1-206ENST00000482632 WDR81Q562E7 1941 aa11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 ATP9AO75110 1047 aa11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 FDPSP14324 419 aaKnown RBP11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 RAG1P15918 1043 aa11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 KCNA2P16389 499 aa11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 PSEN2P49810 448 aa11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 HMGN5P82970 282 aaKnown RBP11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 SAFBQ15424 915 aaKnown RBP eCLIP11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 INF2Q27J81 1249 aa11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 KIAA0753Q2KHM9 967 aa11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 PIK3AP1Q6ZUJ8 805 aa11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 SH3RF1Q7Z6J0 888 aa11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 GPIHBP1Q8IV16 184 aa11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 SPNS2Q8IVW8 549 aa11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 C7orf31Q8N865 590 aa11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 DAGLBQ8NCG7 672 aa11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 EMID1Q96A84 441 aaPredicted RBP11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 TMX3Q96JJ7 454 aa11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 C8orf76Q96K31 380 aa11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 LLPHQ9BRT6 129 aaKnown RBP11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 KATNAL1Q9BW62 490 aa11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 PPP1R12CQ9BZL4 782 aa11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 TRPV6Q9H1D0 765 aa11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 SLC9A2Q9UBY0 812 aa11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 DNAH12Q6ZR08 3092 aa11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 LAMA3Q16787 3333 aa11.35□□□□□ -0.59
SPTLC1-206ENST00000482632 FAM86B1E9PN63 330 aa11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 MAFGO15525 162 aa11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 MARCH6O60337 910 aa11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 B4GALT4O60513 344 aa11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 LGALS2P05162 132 aa11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 CYP3A4P08684 503 aa11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 FAM86B2P0C5J1 330 aa11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 MARK3P27448 753 aa11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 TCF7P36402 384 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 MAGEA10P43363 369 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 MCM2P49736 904 aa11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 SETQ01105 290 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 NR5A1Q13285 461 aa11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 LETM2Q2VYF4 491 aa11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 C1orf53Q5VUE5 145 aa11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 KRT40Q6A162 431 aa11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 TRIM50Q86XT4 487 aa11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 FAM177A1Q8N128 213 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 DDX12PQ92771 950 aa11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 GLG1Q92896 1179 aa11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 GPR20Q99678 358 aa11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 SENP7Q9BQF6 1050 aa11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 ZNF577Q9BSK1 485 aa11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 AGO4Q9HCK5 861 aaKnown RBP11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 JPH1Q9HDC5 661 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 TRMT13Q9NUP7 481 aaKnown RBP11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 ZNF215Q9UL58 517 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 TELO2Q9Y4R8 837 aa11.34□□□□□ -0.59
SPTLC1-206ENST00000482632 GRIN2DO15399 1336 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms