RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 TCP11X2Q5H9J9 407 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 TREML2Q5T2D2 321 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 POTEGQ6S5H5 508 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 POTEEQ6S8J3 1075 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 DLK2Q6UY11 383 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 APTXQ7Z2E3 356 aaKnown RBP13.02□□□□□ -0.33
GGPS1-205ENST00000482013 MIER3Q7Z3K6 550 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 TMC6Q7Z403 805 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 IL31RAQ8NI17 732 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 DYDC2Q96IM9 177 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 NAP1L5Q96NT1 182 aaPredicted RBP13.02□□□□□ -0.33
GGPS1-205ENST00000482013 SENP7Q9BQF6 1050 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 UNC45AQ9H3U1 944 aa13.02□□□□□ -0.33
GGPS1-205ENST00000482013 A1CFQ9NQ94 594 aaKnown RBP13.02□□□□□ -0.33
GGPS1-205ENST00000482013 RRAGDQ9NQL2 400 aaPredicted RBP13.02□□□□□ -0.33
GGPS1-205ENST00000482013 ADD3Q9UEY8 706 aaKnown RBP13.02□□□□□ -0.33
GGPS1-205ENST00000482013 B4DLN1 442 aa13.01□□□□□ -0.33
GGPS1-205ENST00000482013 SSBP05455 408 aaKnown RBP eCLIP13.01□□□□□ -0.33
GGPS1-205ENST00000482013 FCER1AP12319 257 aa13.01□□□□□ -0.33
GGPS1-205ENST00000482013 GAP43P17677 238 aa13.01□□□□□ -0.33
GGPS1-205ENST00000482013 JAK3P52333 1124 aa13.01□□□□□ -0.33
GGPS1-205ENST00000482013 KRT76Q01546 638 aa13.01□□□□□ -0.33
GGPS1-205ENST00000482013 SNAPC2Q13487 334 aa13.01□□□□□ -0.33
GGPS1-205ENST00000482013 GIT2Q14161 759 aa13.01□□□□□ -0.33
GGPS1-205ENST00000482013 CCDC144BQ3MJ40 725 aa13.01□□□□□ -0.33
GGPS1-205ENST00000482013 ARSHQ5FYA8 562 aa13.01□□□□□ -0.33
GGPS1-205ENST00000482013 FAM26FQ5R3K3 315 aa13.01□□□□□ -0.33
GGPS1-205ENST00000482013 TPH2Q8IWU9 490 aa13.01□□□□□ -0.33
GGPS1-205ENST00000482013 KIAA0895Q8NCT3 520 aa13.01□□□□□ -0.33
GGPS1-205ENST00000482013 CNKSR2Q8WXI2 1034 aa13.01□□□□□ -0.33
GGPS1-205ENST00000482013 OPTNQ96CV9 577 aa13.01□□□□□ -0.33
GGPS1-205ENST00000482013 SLC10A4Q96EP9 437 aa13.01□□□□□ -0.33
GGPS1-205ENST00000482013 CLMNQ96JQ2 1002 aa13.01□□□□□ -0.33
GGPS1-205ENST00000482013 TRIM47Q96LD4 638 aa13.01□□□□□ -0.33
GGPS1-205ENST00000482013 INPP4AQ96PE3 977 aaPredicted RBP13.01□□□□□ -0.33
GGPS1-205ENST00000482013 DUSP9Q99956 384 aaKnown RBP13.01□□□□□ -0.33
GGPS1-205ENST00000482013 ASCC2Q9H1I8 757 aaPredicted RBP13.01□□□□□ -0.33
GGPS1-205ENST00000482013 KCNF1Q9H3M0 494 aa13.01□□□□□ -0.33
GGPS1-205ENST00000482013 SLC39A2Q9NP94 309 aa13.01□□□□□ -0.33
GGPS1-205ENST00000482013 MAGEC2Q9UBF1 373 aaPredicted RBP13.01□□□□□ -0.33
GGPS1-205ENST00000482013 TCEAL9Q9UHQ7 104 aa13.01□□□□□ -0.33
GGPS1-205ENST00000482013 NFASCO94856 1347 aa13.01□□□□□ -0.33
GGPS1-205ENST00000482013 KIAA1217Q5T5P2 1943 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 KCNJ18B7U540 433 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 KRT18P05783 430 aaKnown RBP13□□□□□ -0.33
GGPS1-205ENST00000482013 TPM2P07951 284 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 MYCLP12524 364 aaPredicted RBP13□□□□□ -0.33
GGPS1-205ENST00000482013 PSMC6P62333 389 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 TBX2Q13207 712 aaPredicted RBP13□□□□□ -0.33
GGPS1-205ENST00000482013 MOGSQ13724 837 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 KCNJ12Q14500 433 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 PLS1Q14651 629 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 KRT31Q15323 416 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 GNPTABQ3T906 1256 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 SPECC1LQ69YQ0 1117 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 ANKRD40Q6AI12 368 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 FILIP1Q7Z7B0 1213 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 MYOCDQ8IZQ8 938 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 CSGALNACT2Q8N6G5 542 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 KIAA1524Q8TCG1 905 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 CACTINQ8WUQ7 758 aaKnown RBP13□□□□□ -0.33
GGPS1-205ENST00000482013 ZNF830Q96NB3 372 aaPredicted RBP13□□□□□ -0.33
GGPS1-205ENST00000482013 UIMC1Q96RL1 719 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 TSG101Q99816 390 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 SRRTQ9BXP5 876 aaKnown RBP13□□□□□ -0.33
GGPS1-205ENST00000482013 SPATC1LQ9H0A9 340 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 ZSWIM4Q9H7M6 989 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 INTS13Q9NVM9 706 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 RGL1Q9NZL6 768 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 SEL1LQ9UBV2 794 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 DBR1Q9UK59 544 aaKnown RBP13□□□□□ -0.33
GGPS1-205ENST00000482013 MAPK8IP1Q9UQF2 711 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 CLEC11AQ9Y240 323 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 SLC45A1Q9Y2W3 748 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 PCDHA2Q9Y5H9 948 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 COL4A3BPQ9Y5P4 624 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 LCTP09848 1927 aa13□□□□□ -0.33
GGPS1-205ENST00000482013 ITIH6Q6UXX5 1313 aa12.99□□□□□ -0.33
GGPS1-205ENST00000482013 LOC102724159A0A0B4J2E5 919 aa12.99□□□□□ -0.33
GGPS1-205ENST00000482013 DKC1O60832 514 aaKnown RBP eCLIP12.99□□□□□ -0.33
GGPS1-205ENST00000482013 SFPQP23246 707 aaKnown RBP eCLIP12.99□□□□□ -0.33
GGPS1-205ENST00000482013 ICAM3P32942 547 aa12.99□□□□□ -0.33
GGPS1-205ENST00000482013 PBX1P40424 430 aa12.99□□□□□ -0.33
GGPS1-205ENST00000482013 KCNJ6P48051 423 aa12.99□□□□□ -0.33
GGPS1-205ENST00000482013 COPB1P53618 953 aaKnown RBP12.99□□□□□ -0.33
GGPS1-205ENST00000482013 HERVK_113P62684 666 aa12.99□□□□□ -0.33
GGPS1-205ENST00000482013 CYP4A11Q02928 519 aa12.99□□□□□ -0.33
GGPS1-205ENST00000482013 ITGB3BPQ13352 177 aaPredicted RBP12.99□□□□□ -0.33
GGPS1-205ENST00000482013 CTTNQ14247 550 aaKnown RBP12.99□□□□□ -0.33
GGPS1-205ENST00000482013 PWP2Q15269 919 aaKnown RBP12.99□□□□□ -0.33
GGPS1-205ENST00000482013 HERC4Q5GLZ8 1057 aaPredicted RBP12.99□□□□□ -0.33
GGPS1-205ENST00000482013 ZNF746Q6NUN9 644 aaPredicted RBP12.99□□□□□ -0.33
GGPS1-205ENST00000482013 RINT1Q6NUQ1 792 aa12.99□□□□□ -0.33
GGPS1-205ENST00000482013 MOB2Q70IA6 237 aa12.99□□□□□ -0.33
GGPS1-205ENST00000482013 IRF2BP1Q8IU81 584 aa12.99□□□□□ -0.33
GGPS1-205ENST00000482013 CCDC112Q8NEF3 446 aa12.99□□□□□ -0.33
GGPS1-205ENST00000482013 TIPINQ9BVW5 301 aa12.99□□□□□ -0.33
GGPS1-205ENST00000482013 BHMT2Q9H2M3 363 aa12.99□□□□□ -0.33
GGPS1-205ENST00000482013 SEMA6BQ9H3T3 888 aa12.99□□□□□ -0.33
GGPS1-205ENST00000482013 BTBD7Q9P203 1132 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms