RNA–Protein interactions for RNA: ENST00000481606.1

TFE3-202, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-202ENST00000481606 HERC4Q5GLZ8 1057 aaPredicted RBP6.39□□□□□ -1.39
TFE3-202ENST00000481606 UTP14CQ5TAP6 766 aaKnown RBP6.39□□□□□ -1.39
TFE3-202ENST00000481606 DIEXFQ68CQ4 756 aaKnown RBP6.39□□□□□ -1.39
TFE3-202ENST00000481606 FCHSD1Q86WN1 690 aa6.39□□□□□ -1.39
TFE3-202ENST00000481606 HOMER1Q86YM7 354 aa6.39□□□□□ -1.39
TFE3-202ENST00000481606 RNF135Q8IUD6 432 aa6.39□□□□□ -1.39
TFE3-202ENST00000481606 STAG2Q8N3U4 1231 aa6.39□□□□□ -1.39
TFE3-202ENST00000481606 PRSS33Q8NF86 280 aa6.39□□□□□ -1.39
TFE3-202ENST00000481606 LMBR1Q8WVP7 490 aa6.39□□□□□ -1.39
TFE3-202ENST00000481606 IL17RAQ96F46 866 aa6.39□□□□□ -1.39
TFE3-202ENST00000481606 SNX27Q96L92 541 aa6.39□□□□□ -1.39
TFE3-202ENST00000481606 MFSD14AQ96MC6 490 aa6.39□□□□□ -1.39
TFE3-202ENST00000481606 PHOX2BQ99453 314 aa6.39□□□□□ -1.39
TFE3-202ENST00000481606 RNPEPQ9H4A4 650 aa6.39□□□□□ -1.39
TFE3-202ENST00000481606 IGFLR1Q9H665 355 aa6.39□□□□□ -1.39
TFE3-202ENST00000481606 SETD4Q9NVD3 440 aa6.39□□□□□ -1.39
TFE3-202ENST00000481606 CD207Q9UJ71 328 aa6.39□□□□□ -1.39
TFE3-202ENST00000481606 ZNF215Q9UL58 517 aaPredicted RBP6.39□□□□□ -1.39
TFE3-202ENST00000481606 RWDD3Q9Y3V2 267 aa6.39□□□□□ -1.39
TFE3-202ENST00000481606 STK24Q9Y6E0 443 aa6.39□□□□□ -1.39
TFE3-202ENST00000481606 KAT6AQ92794 2004 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 TMEM221A6NGB7 291 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 GCOM1H8Y6P7 765 aaPredicted RBP6.38□□□□□ -1.39
TFE3-202ENST00000481606 M0R296 226 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 ZBTB5O15062 677 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 MMP1P03956 469 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 RB1P06400 928 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 LINC00271P0C7V0 271 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 POLR2MP0CAP2 368 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 TGFB3P10600 412 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 GHRP10912 638 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 GNAT1P11488 350 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 BMPR1AP36894 532 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 NDUFV1P49821 464 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 PTPN5P54829 565 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 BTG3Q14201 252 aaPredicted RBP6.38□□□□□ -1.39
TFE3-202ENST00000481606 CTC1Q2NKJ3 1217 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 FAM26DQ5JW98 314 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 IFIT1BQ5T764 474 aaKnown RBP6.38□□□□□ -1.39
TFE3-202ENST00000481606 METTL7BQ6UX53 244 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 STOX1Q6ZVD7 989 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 VSIG10LQ86VR7 867 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 SUGP1Q8IWZ8 645 aaKnown RBP6.38□□□□□ -1.39
TFE3-202ENST00000481606 RILPL2Q969X0 211 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 UBAC1Q9BSL1 405 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 BCAS3Q9H6U6 928 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 RC3H2Q9HBD1 1191 aaKnown RBP6.38□□□□□ -1.39
TFE3-202ENST00000481606 MAP3K20Q9NYL2 800 aaKnown RBP6.38□□□□□ -1.39
TFE3-202ENST00000481606 SUPT16HQ9Y5B9 1047 aaKnown RBP6.38□□□□□ -1.39
TFE3-202ENST00000481606 PCDHA1Q9Y5I3 950 aa6.38□□□□□ -1.39
TFE3-202ENST00000481606 XIRP2A4UGR9 3374 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 BAZ2BQ9UIF8 2168 aaKnown RBP6.37□□□□□ -1.39
TFE3-202ENST00000481606 TTC3P53804 2025 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 FRMPD4Q14CM0 1322 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 KLRF2D3W0D1 207 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 FIBPO43427 364 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 CHRNA1P02708 482 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 CD44P16070 742 aaKnown RBP6.37□□□□□ -1.39
TFE3-202ENST00000481606 SDSP20132 328 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 NT5C2P49902 561 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 SEMA3FQ13275 785 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 NEDD9Q14511 834 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 LPIN1Q14693 890 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 SLC35G1Q2M3R5 365 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 CWC27Q6UX04 472 aaKnown RBP6.37□□□□□ -1.39
TFE3-202ENST00000481606 RUFY4Q6ZNE9 571 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 TRIM67Q6ZTA4 783 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 CYFIP1Q7L576 1253 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 ADGRD2Q7Z7M1 963 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 EDAQ92838 391 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 PPP2R3CQ969Q6 453 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 PBXIP1Q96AQ6 731 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 MTMR8Q96EF0 704 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 MSLNLQ96KJ4 702 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 INPP4AQ96PE3 977 aaPredicted RBP6.37□□□□□ -1.39
TFE3-202ENST00000481606 PIGSQ96S52 555 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 GPR20Q99678 358 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 PLVAPQ9BX97 442 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 USP26Q9BXU7 913 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 KRT23Q9C075 422 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 LNPKQ9C0E8 428 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 ALG13Q9NP73 1137 aaKnown RBP6.37□□□□□ -1.39
TFE3-202ENST00000481606 DIAPH3Q9NSV4 1193 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 FAM86C1Q9NVL1 165 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 ZSWIM5Q9P217 1185 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 TELO2Q9Y4R8 837 aa6.37□□□□□ -1.39
TFE3-202ENST00000481606 MRPL42Q9Y6G3 142 aaKnown RBP6.37□□□□□ -1.39
TFE3-202ENST00000481606 PLXNA4Q9HCM2 1894 aa6.36□□□□□ -1.39
TFE3-202ENST00000481606 ZDBF2Q9HCK1 2354 aa6.36□□□□□ -1.39
TFE3-202ENST00000481606 NRCAMQ92823 1304 aa6.36□□□□□ -1.39
TFE3-202ENST00000481606 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.36□□□□□ -1.39
TFE3-202ENST00000481606 STAM2O75886 525 aa6.36□□□□□ -1.39
TFE3-202ENST00000481606 ITGB1P05556 798 aa6.36□□□□□ -1.39
TFE3-202ENST00000481606 IBSPP21815 317 aaPredicted RBP6.36□□□□□ -1.39
TFE3-202ENST00000481606 MARK3P27448 753 aa6.36□□□□□ -1.39
TFE3-202ENST00000481606 ICAM3P32942 547 aa6.36□□□□□ -1.39
TFE3-202ENST00000481606 NRIP1P48552 1158 aa6.36□□□□□ -1.39
TFE3-202ENST00000481606 RRP1P56182 461 aaKnown RBP6.36□□□□□ -1.39
TFE3-202ENST00000481606 ADAM17P78536 824 aa6.36□□□□□ -1.39
TFE3-202ENST00000481606 MRPS9P82933 396 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms