RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 NLRP5P59047 1200 aa13.01□□□□□ -0.33
RAPGEF1-207ENST00000481260 EARS2Q5JPH6 523 aaKnown RBP13.01□□□□□ -0.33
RAPGEF1-207ENST00000481260 RASIP1Q5U651 963 aa13.01□□□□□ -0.33
RAPGEF1-207ENST00000481260 OTOP2Q7RTS6 562 aa13.01□□□□□ -0.33
RAPGEF1-207ENST00000481260 TMEM199Q8N511 208 aa13.01□□□□□ -0.33
RAPGEF1-207ENST00000481260 A0A0C4DFX4 3053 aa13□□□□□ -0.33
RAPGEF1-207ENST00000481260 TRIP12Q14669 1992 aaPredicted RBP13□□□□□ -0.33
RAPGEF1-207ENST00000481260 DEXIO95424 95 aa13□□□□□ -0.33
RAPGEF1-207ENST00000481260 CYP3A4P08684 503 aa13□□□□□ -0.33
RAPGEF1-207ENST00000481260 IQCF3P0C7M6 154 aa13□□□□□ -0.33
RAPGEF1-207ENST00000481260 HOXC8P31273 242 aa13□□□□□ -0.33
RAPGEF1-207ENST00000481260 ZNF76P36508 570 aa13□□□□□ -0.33
RAPGEF1-207ENST00000481260 ACTR2P61160 394 aa13□□□□□ -0.33
RAPGEF1-207ENST00000481260 PTPN11Q06124 597 aaPredicted RBP13□□□□□ -0.33
RAPGEF1-207ENST00000481260 PPIGQ13427 754 aaKnown RBP eCLIP13□□□□□ -0.333e-7■□□□□ 10.8
RAPGEF1-207ENST00000481260 PRR16Q569H4 304 aa13□□□□□ -0.33
RAPGEF1-207ENST00000481260 RUFY4Q6ZNE9 571 aa13□□□□□ -0.33
RAPGEF1-207ENST00000481260 PLA2G4DQ86XP0 818 aa13□□□□□ -0.33
RAPGEF1-207ENST00000481260 TRIM22Q8IYM9 498 aa13□□□□□ -0.33
RAPGEF1-207ENST00000481260 NSUN7Q8NE18 718 aaKnown RBP13□□□□□ -0.33
RAPGEF1-207ENST00000481260 GTF3C6Q969F1 213 aa13□□□□□ -0.33
RAPGEF1-207ENST00000481260 JPH1Q9HDC5 661 aaPredicted RBP13□□□□□ -0.33
RAPGEF1-207ENST00000481260 PCDHA4Q9UN74 947 aa13□□□□□ -0.33
RAPGEF1-207ENST00000481260 NOD1Q9Y239 953 aa13□□□□□ -0.33
RAPGEF1-207ENST00000481260 RBM19Q9Y4C8 960 aaKnown RBP13□□□□□ -0.33
RAPGEF1-207ENST00000481260 TET1Q8NFU7 2136 aa13□□□□□ -0.33
RAPGEF1-207ENST00000481260 NBNO60934 754 aa12.99□□□□□ -0.33
RAPGEF1-207ENST00000481260 TDP2O95551 362 aa12.99□□□□□ -0.33
RAPGEF1-207ENST00000481260 SUPT20HL2P0C7V6 817 aa12.99□□□□□ -0.33
RAPGEF1-207ENST00000481260 CKBP12277 381 aa12.99□□□□□ -0.33
RAPGEF1-207ENST00000481260 ZNF618Q5T7W0 954 aa12.99□□□□□ -0.33
RAPGEF1-207ENST00000481260 TMCO2Q7Z6W1 182 aaPredicted RBP12.99□□□□□ -0.33
RAPGEF1-207ENST00000481260 DEFB123Q8N688 67 aa12.99□□□□□ -0.33
RAPGEF1-207ENST00000481260 LMBR1Q8WVP7 490 aa12.99□□□□□ -0.33
RAPGEF1-207ENST00000481260 TRAPPC12Q8WVT3 735 aa12.99□□□□□ -0.33
RAPGEF1-207ENST00000481260 SEPT1Q8WYJ6 367 aa12.99□□□□□ -0.33
RAPGEF1-207ENST00000481260 KATNAL1Q9BW62 490 aa12.99□□□□□ -0.33
RAPGEF1-207ENST00000481260 SEZ6LQ9BYH1 1024 aa12.99□□□□□ -0.33
RAPGEF1-207ENST00000481260 TTYH1Q9H313 450 aaPredicted RBP12.99□□□□□ -0.33
RAPGEF1-207ENST00000481260 EHMT1Q9H9B1 1298 aa12.99□□□□□ -0.33
RAPGEF1-207ENST00000481260 SH3GLB2Q9NR46 395 aa12.99□□□□□ -0.33
RAPGEF1-207ENST00000481260 ORC3Q9UBD5 711 aaPredicted RBP12.99□□□□□ -0.33
RAPGEF1-207ENST00000481260 SLC9A2Q9UBY0 812 aa12.99□□□□□ -0.33
RAPGEF1-207ENST00000481260 REV3LO60673 3130 aa12.98□□□□□ -0.33
RAPGEF1-207ENST00000481260 C17orf102A2RUQ5 167 aa12.98□□□□□ -0.33
RAPGEF1-207ENST00000481260 WNT7AO00755 349 aa12.98□□□□□ -0.33
RAPGEF1-207ENST00000481260 LGR5O75473 907 aa12.98□□□□□ -0.33
RAPGEF1-207ENST00000481260 CD2BP2O95400 341 aaKnown RBP12.98□□□□□ -0.33
RAPGEF1-207ENST00000481260 MYOGP15173 224 aa12.98□□□□□ -0.33
RAPGEF1-207ENST00000481260 GNA11P29992 359 aa12.98□□□□□ -0.33
RAPGEF1-207ENST00000481260 RABGGTBP53611 331 aa12.98□□□□□ -0.33
RAPGEF1-207ENST00000481260 ADAM17P78536 824 aa12.98□□□□□ -0.33
RAPGEF1-207ENST00000481260 MARCH8Q5T0T0 291 aa12.98□□□□□ -0.33
RAPGEF1-207ENST00000481260 SERINC5Q86VE9 423 aa12.98□□□□□ -0.33
RAPGEF1-207ENST00000481260 BLIDQ8IZY5 108 aa12.98□□□□□ -0.33
RAPGEF1-207ENST00000481260 CCDC148Q8NFR7 591 aa12.98□□□□□ -0.33
RAPGEF1-207ENST00000481260 TBCKQ8TEA7 893 aa12.98□□□□□ -0.33
RAPGEF1-207ENST00000481260 CCDC12Q8WUD4 166 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF1-207ENST00000481260 HERVK_113Q902F9 699 aa12.98□□□□□ -0.33
RAPGEF1-207ENST00000481260 ATP6V0A1Q93050 837 aa12.98□□□□□ -0.33
RAPGEF1-207ENST00000481260 CDHR1Q96JP9 859 aa12.98□□□□□ -0.33
RAPGEF1-207ENST00000481260 PHF20Q9BVI0 1012 aa12.98□□□□□ -0.33
RAPGEF1-207ENST00000481260 C22orf23Q9BZE7 217 aa12.98□□□□□ -0.33
RAPGEF1-207ENST00000481260 GLT8D2Q9H1C3 349 aa12.98□□□□□ -0.33
RAPGEF1-207ENST00000481260 NFASCO94856 1347 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 STK36Q9NRP7 1315 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 IPO5O00410 1097 aaKnown RBP12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 MSH4O15457 936 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 ARHGEF15O94989 841 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 FGBP02675 491 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 CTSHP09668 335 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 ATP4AP20648 1035 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 CIITAP33076 1130 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 THPOP40225 353 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 IGBP1P78318 339 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 NR5A1Q13285 461 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 PTK7Q13308 1070 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 INF2Q27J81 1249 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 LRRC8DQ7L1W4 858 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 NIPA1Q7RTP0 329 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 CCDC60Q8IWA6 550 aaPredicted RBP12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 CCDC83Q8IWF9 413 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 DAGLBQ8NCG7 672 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 GLG1Q92896 1179 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 GUCD1Q96NT3 240 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 YBX2Q9Y2T7 364 aaKnown RBP12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 UNC80Q8N2C7 3258 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 TANC1Q9C0D5 1861 aa12.97□□□□□ -0.33
RAPGEF1-207ENST00000481260 SLC37A4O43826 429 aa12.96□□□□□ -0.33
RAPGEF1-207ENST00000481260 SELPP16109 830 aa12.96□□□□□ -0.33
RAPGEF1-207ENST00000481260 GUCY1B3Q02153 619 aa12.96□□□□□ -0.33
RAPGEF1-207ENST00000481260 PPFIA1Q13136 1202 aa12.96□□□□□ -0.33
RAPGEF1-207ENST00000481260 BFSP2Q13515 415 aa12.96□□□□□ -0.33
RAPGEF1-207ENST00000481260 PLCB4Q15147 1175 aa12.96□□□□□ -0.33
RAPGEF1-207ENST00000481260 ANKRD1Q15327 319 aa12.96□□□□□ -0.33
RAPGEF1-207ENST00000481260 PSRC1Q6PGN9 363 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF1-207ENST00000481260 ABHD15Q6UXT9 468 aa12.96□□□□□ -0.33
RAPGEF1-207ENST00000481260 TRMT1LQ7Z2T5 733 aaKnown RBP12.96□□□□□ -0.33
RAPGEF1-207ENST00000481260 RETREG2Q8NC44 543 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms