RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 PBX4Q9BYU1 374 aa9.32□□□□□ -0.92
LSM5-210ENST00000480956 ATP13A2Q9NQ11 1180 aa9.32□□□□□ -0.92
LSM5-210ENST00000480956 CACNA2D2Q9NY47 1150 aa9.32□□□□□ -0.92
LSM5-210ENST00000480956 GPR34Q9UPC5 381 aa9.32□□□□□ -0.92
LSM5-210ENST00000480956 SH3BP1Q9Y3L3 701 aa9.32□□□□□ -0.92
LSM5-210ENST00000480956 STAT1P42224 750 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 CFAP58Q5T655 872 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 DCAF15Q66K64 600 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 NPNTQ6UXI9 565 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 TTLL7Q6ZT98 887 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 CCDC144CPQ8IYA2 1237 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 PHACTR4Q8IZ21 702 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 TMEM145Q8NBT3 493 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 DDX54Q8TDD1 881 aaKnown RBP9.31□□□□□ -0.92
LSM5-210ENST00000480956 GPBAR1Q8TDU6 330 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 LMBR1Q8WVP7 490 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 LRTOMTQ8WZ04 291 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 TMEM41AQ96HV5 264 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 NT5C1BQ96P26 610 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 RASSF4Q9H2L5 321 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 ELAC1Q9H777 363 aaKnown RBP9.31□□□□□ -0.92
LSM5-210ENST00000480956 IRAK4Q9NWZ3 460 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 H2AFY2Q9P0M6 372 aaPredicted RBP9.31□□□□□ -0.92
LSM5-210ENST00000480956 WHRNQ9P202 907 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 ADAM30Q9UKF2 790 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 PADI4Q9UM07 663 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 CORO2BQ9UQ03 480 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 COQ6Q9Y2Z9 468 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 PCDHGB2Q9Y5G2 931 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 TRIM64A6NGJ6 449 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 TRIM64BA6NI03 449 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 A6NLC8 198 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 FRS3O43559 492 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 CNTFP26441 200 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 ZNF449Q6P9G9 518 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 SH3KBP1Q96B97 665 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 CCDC140Q96MF4 163 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 SDF4Q9BRK5 362 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 DBNDD1Q9H9R9 158 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 STARD7Q9NQZ5 370 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 GMPR2Q9P2T1 348 aaKnown RBP9.31□□□□□ -0.92
LSM5-210ENST00000480956 SLC13A4Q9UKG4 626 aa9.31□□□□□ -0.92
LSM5-210ENST00000480956 PTPDC1A2A3K4 754 aa9.3□□□□□ -0.92
LSM5-210ENST00000480956 IRAK2O43187 625 aa9.3□□□□□ -0.92
LSM5-210ENST00000480956 MAN1A2O60476 641 aa9.3□□□□□ -0.92
LSM5-210ENST00000480956 POLBP06746 335 aa9.3□□□□□ -0.92
LSM5-210ENST00000480956 SNRPB2P08579 225 aaKnown RBP9.3□□□□□ -0.92
LSM5-210ENST00000480956 GYS1P13807 737 aa9.3□□□□□ -0.92
LSM5-210ENST00000480956 XBP1P17861 261 aa9.3□□□□□ -0.92
LSM5-210ENST00000480956 NFKB1P19838 968 aa9.3□□□□□ -0.92
LSM5-210ENST00000480956 GRK2P25098 689 aa9.3□□□□□ -0.92
LSM5-210ENST00000480956 FXR1P51114 621 aaKnown RBP eCLIP9.3□□□□□ -0.92
LSM5-210ENST00000480956 SMC1AQ14683 1233 aaKnown RBP9.3□□□□□ -0.92
LSM5-210ENST00000480956 CNN3Q15417 329 aaKnown RBP9.3□□□□□ -0.92
LSM5-210ENST00000480956 TMEM177Q53S58 311 aa9.3□□□□□ -0.92
LSM5-210ENST00000480956 SYTL1Q8IYJ3 562 aa9.3□□□□□ -0.92
LSM5-210ENST00000480956 EFHBQ8N7U6 833 aa9.3□□□□□ -0.92
LSM5-210ENST00000480956 DCAF4Q8WV16 495 aa9.3□□□□□ -0.92
LSM5-210ENST00000480956 UCMAQ8WVF2 138 aa9.3□□□□□ -0.92
LSM5-210ENST00000480956 IPCEF1Q8WWN9 437 aaPredicted RBP9.3□□□□□ -0.92
LSM5-210ENST00000480956 ELMO3Q96BJ8 720 aa9.3□□□□□ -0.92
LSM5-210ENST00000480956 STK31Q9BXU1 1019 aa9.3□□□□□ -0.92
LSM5-210ENST00000480956 PRDM6Q9NQX0 595 aa9.3□□□□□ -0.92
LSM5-210ENST00000480956 GRHPRQ9UBQ7 328 aa9.3□□□□□ -0.92
LSM5-210ENST00000480956 CAPN8A6NHC0 703 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 SPDYE3A6NKU9 549 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 B4DLN1 442 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 ZBED4O75132 1171 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 KCNH1O95259 989 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 ATP1A3P13637 1013 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 MSX1P28360 303 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 DCTN1Q14203 1278 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 TAF5Q15542 800 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 SLC14A2Q15849 920 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 MEA1Q16626 185 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 CCDC158Q5M9N0 1113 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 HEATR4Q86WZ0 1026 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 BRSK2Q8IWQ3 736 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 TEX11Q8IYF3 940 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 VWA5B2Q8N398 1253 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 ASB12Q8WXK4 309 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 BRF1Q92994 677 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 PHKBQ93100 1093 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 TRIM11Q96F44 468 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 RCC1LQ96I51 464 aaKnown RBP9.29□□□□□ -0.92
LSM5-210ENST00000480956 GMCL1Q96IK5 515 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 TREX2Q9BQ50 279 aaPredicted RBP9.29□□□□□ -0.92
LSM5-210ENST00000480956 OLA1Q9NTK5 396 aaKnown RBP9.29□□□□□ -0.92
LSM5-210ENST00000480956 OXSMQ9NWU1 459 aa9.29□□□□□ -0.92
LSM5-210ENST00000480956 A0A1B0GTH6 734 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 DKC1O60832 514 aaKnown RBP eCLIP9.28□□□□□ -0.92
LSM5-210ENST00000480956 SKAP2O75563 359 aaPredicted RBP9.28□□□□□ -0.92
LSM5-210ENST00000480956 CLEC3AO75596 197 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 BAG2O95816 211 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 DNTTP04053 509 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 VEGFAP15692 232 aaPredicted RBP9.28□□□□□ -0.92
LSM5-210ENST00000480956 HOXC12P31275 282 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 NPTX2P47972 431 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 DCAF7P61962 342 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 ATP11AP98196 1134 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms